Gene: Carub.0002s1535
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0002s1535
- Transcript Identifier Carub.0002s1535.1
- Gene Type Coding gene
- Location scaffold_2 : 9228428-9232727 : negative
Gene Family Information
- ID HOM05D001377
- #Genes/#Species 454/96
- Phylogenetic origin
- ID ORTHO05D001221
- #Genes/#Species 453/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0002s1535.v1.1
- pacid 39245355
- synonym Carubv10019698m.g
Descriptions
- Description KOG0978//KOG0982//KOG4568 - E3 ubiquitin ligase involved in syntaxin degradation // Centrosomal protein Nuf // Cytoskeleton-associated protein and related proteins
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006997 | IEA | InterPro | nucleus organization | |
| GO:0006974 | ISO | PLAZA Integrative Orthology | cellular response to DNA damage stimulus | AT1G68790 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G68790 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT1G68790 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT1G68790 |
| GO:0005654 | ISO | PLAZA Integrative Orthology | nucleoplasm | AT1G68790 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR040418 | Protein crowded nuclei |
| Mapman id | Description |
|---|---|
| 20.4.3.1 | Cytoskeleton organisation.nuclear dynamics.nuclear shape determination.lamin-like protein (CRWN) |