Gene: AT1G68790
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G68790
- Transcript Identifier AT1G68790.1
- Gene Type Coding gene
- Location Chr1 : 25834932-25839157 : negative
Gene Family Information
- ID HOM05D001377
- #Genes/#Species 454/96
- Phylogenetic origin
- ID ORTHO05D001221
- #Genes/#Species 453/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G68790.1
- symbol LINC3
- Alias CRWN3,CROWDED NUCLEI 3
- full_name LITTLE NUCLEI3
- uniprot Q9CA42
Descriptions
- Description little nuclei3
- Computational description LITTLE NUCLEI3 (LINC3); INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nuclear matrix constituent protein-related (TAIR:AT1G13220.2); Has 314839 Blast hits to 141527 proteins in 3854 species: Archae - 3371; Bacteria - 67403; Metazoa - 125121; Fungi - 24709; Plants - 16322; Viruses - 1225; Other Eukaryotes - 76688 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006997 | IEA | GOA Database | nucleus organization | |
| GO:0006997 | IMP | Gene Ontology | nucleus organization | 1 |
| GO:0006997 | IEA | InterPro | nucleus organization | |
| GO:0006974 | IGI | Gene Ontology | cellular response to DNA damage stimulus | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005652 | IEA | GOA Database | nuclear lamina | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0009506 | IDA | GOA Database | plasmodesma | |
| GO:0009506 | HDA | Gene Ontology | plasmodesma | 3 |
| GO:0005730 | IDA | GOA Database | nucleolus | |
| GO:0005730 | HDA | Gene Ontology | nucleolus | 4 |
| GO:0031965 | IEA | GOA Database | nuclear membrane | |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | IDA ISM | Gene Ontology | cytoplasm | 5 |
| GO:0005654 | IEA | GOA Database | nucleoplasm | |
| GO:0005654 | IDA | Gene Ontology | nucleoplasm | 5 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR040418 | Protein crowded nuclei |
| Mapman id | Description |
|---|---|
| 20.4.3.1 | Cytoskeleton organisation.nuclear dynamics.nuclear shape determination.lamin-like protein (CRWN) |