Gene: AT1G67230

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G67230
  • Transcript Identifier AT1G67230.1
  • Gene Type Coding gene
  • Location Chr1 : 25151561-25156032 : negative

Gene Family Information

  • ID HOM05D001377
  • #Genes/#Species 454/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G67230.1
  • symbol LINC1
  • Alias AtLINC1,CRWN1,CROWDED NUCLEI 1,KAKU2,(Japanese for nucleus) 2
  • full_name LITTLE NUCLEI1
  • uniprot F4HRT5

Descriptions

  • Description little nuclei1
  • Computational description LITTLE NUCLEI1 (LINC1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: nucleus organization; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nuclear matrix constituent protein-related (TAIR:AT1G13220.2); Has 314297 Blast hits to 138342 proteins in 3965 species: Archae - 3454; Bacteria - 70538; Metazoa - 123746; Fungi - 25476; Plants - 17143; Viruses - 1173; Other Eukaryotes - 72767 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006997
IEA
GOA Databasenucleus organization
GO:0006997
IMP, IGI
Gene Ontologynucleus organization1 2
GO:0006997
IEA
InterPronucleus organization
GO:0097298
IMP
Gene Ontologyregulation of nucleus size3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
HDA
Gene Ontologymitochondrion5
GO:0016363
ISO
PLAZA Integrative Orthologynuclear matrix DCAR_010974
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
Gene Ontologynucleus1
GO:0005634
IEA
InterPronucleus
GO:0016020
IEA
GOA Databasemembrane
GO:0005829
IDA
GOA Databasecytosol
GO:0031965
IEA
GOA Databasenuclear membrane
GO:0005652
IEA
GOA Databasenuclear lamina
GO:0005652
IDA
Gene Ontologynuclear lamina2
GO:0005654
IEA
GOA Databasenucleoplasm
GO:0005654
IDA
Gene Ontologynucleoplasm1
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005635
IDA
Gene Ontologynuclear envelope4
GO:0000785
IDA
Gene Ontologychromatin2
GO:0034399
IDA
Gene Ontologynuclear periphery1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040418 Protein crowded nuclei
Mapman id Description
20.4.3.1 Cytoskeleton organisation.nuclear dynamics.nuclear shape determination.lamin-like protein (CRWN)