Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p09670 Brassica napus
A03p12470 Brassica napus
A03p42720 Brassica napus
A04p05340 Brassica napus
A04p31510 Brassica napus
A05p26450 Brassica napus
A09p50010 Brassica napus
Aa31LG10G11320 Aethionema arabicum
Aa31LG10G12010 Aethionema arabicum
Aa31LG8G8890 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2216 Anthoceros agrestis
Actinidia02193 Actinidia chinensis
Actinidia02484 Actinidia chinensis
Actinidia09272 Actinidia chinensis
Actinidia09433 Actinidia chinensis
Actinidia32316 Actinidia chinensis
Actinidia39170 Actinidia chinensis
Ah.13g076980 Amaranthus hybridus
AL3G29610 Arabidopsis lyrata
AL3G36600 Arabidopsis lyrata
AL4G39330 Arabidopsis lyrata
AL5G35540 Arabidopsis lyrata
AL5G38570 Arabidopsis lyrata
AL8G34060 Arabidopsis lyrata
Aqoxy2G00335 Aquilegia oxysepala
Aqoxy2G01156 Aquilegia oxysepala
Aqoxy7G00600 Aquilegia oxysepala
Aqoxy7G02899 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0V448S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2M3JSP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3QF1KH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.40ITVF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AQ8VKT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BFQG5T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E2BYBF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IC93C3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JAEG6E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RUMB36 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TK7DL4 Arachis hypogaea
AT2G41340 Arabidopsis thaliana
AT3G16680 Arabidopsis thaliana
AT3G22320 Arabidopsis thaliana
AT3G54490 Arabidopsis thaliana
AT3G57080 Arabidopsis thaliana
AT5G57980 Arabidopsis thaliana
ATR0075G025 Amborella trichopoda
ATR0605G142 Amborella trichopoda
ATR0737G047 Amborella trichopoda
Atru.chr1.1488 Acer truncatum
Atru.chr12.1363 Acer truncatum
Atru.chr6.1322 Acer truncatum
Atru.chr7.1387 Acer truncatum
AUR62004591 Chenopodium quinoa
AUR62010147 Chenopodium quinoa
AUR62013142 Chenopodium quinoa
AUR62023558 Chenopodium quinoa
AUR62026846 Chenopodium quinoa
AUR62030335 Chenopodium quinoa
AUR62031991 Chenopodium quinoa
AUR62037204 Chenopodium quinoa
BcaB01g04468 Brassica carinata
BcaB01g04826 Brassica carinata
BcaB01g04843 Brassica carinata
BcaB02g08445 Brassica carinata
BcaB04g19197 Brassica carinata
BcaB06g26336 Brassica carinata
BcaC01g03451 Brassica carinata
BcaC02g09065 Brassica carinata
BcaC02g12896 Brassica carinata
BcaC05g28081 Brassica carinata
BcaC07g40024 Brassica carinata
BcaC07g40048 Brassica carinata
BcaC07g40078 Brassica carinata
BolC3t13595H Brassica oleracea
BolC3t13909H Brassica oleracea
BolC3t17514H Brassica oleracea
BolC4t25376H Brassica oleracea
BolC4t28395H Brassica oleracea
BolC5t32846H Brassica oleracea
BolC8t50856H Brassica oleracea
BraA03t10283Z Brassica rapa
BraA03t10562Z Brassica rapa
BraA03t13419Z Brassica rapa
BraA04t16234Z Brassica rapa
BraA04t18608Z Brassica rapa
BraA05t21518Z Brassica rapa
BraA09t40451Z Brassica rapa
C03p11240 Brassica napus
C03p14680 Brassica napus
C03p52440 Brassica napus
C04p38030 Brassica napus
C04p68940 Brassica napus
C05p41040 Brassica napus
C08p32420 Brassica napus
CAN.G134.219 Capsicum annuum
CAN.G1563.11 Capsicum annuum
CAN.G905.5 Capsicum annuum
CAN.G911.33 Capsicum annuum
CANSAT54G0277 Cannabis sativa
CANSAT56G3212 Cannabis sativa
CANSAT64G2108 Cannabis sativa
CARHR091940 Cardamine hirsuta
CARHR098220 Cardamine hirsuta
CARHR136440 Cardamine hirsuta
CARHR136450 Cardamine hirsuta
CARHR164390 Cardamine hirsuta
CARHR167280 Cardamine hirsuta
CARHR271760 Cardamine hirsuta
CARHR271770 Cardamine hirsuta
Carub.0003s1641 Capsella rubella
Carub.0003s2249 Capsella rubella
Carub.0005s2111 Capsella rubella
Carub.0005s2389 Capsella rubella
Carub.0008s1851 Capsella rubella
Ca_08405_v3 Cicer arietinum L.
Ca_19754_v3 Cicer arietinum L.
Ca_24367_v3 Cicer arietinum L.
Ca_24713_v3 Cicer arietinum L.
Ca_24728_v3 Cicer arietinum L.
Ca_25545_v3 Cicer arietinum L.
Ca_27102_v3 Cicer arietinum L.
CBR_g12259 Chara braunii
CBR_g74217 Chara braunii
Cc03_g09760 Coffea canephora
Cc06_g18820 Coffea canephora
CDE02G1716 Ceratophyllum demersum
CDE02G4307 Ceratophyllum demersum
CDE05G1541 Ceratophyllum demersum
Cfa001700 Carpinus fangiana
Cfa005770 Carpinus fangiana
Cfa016691 Carpinus fangiana
Cfa025210 Carpinus fangiana
Ciclev10005821m.g Citrus clementina
Ciclev10009504m.g Citrus clementina
Ciclev10021999m.g Citrus clementina
CiPaw.02G018700 Carya illinoinensis
CiPaw.03G078900 Carya illinoinensis
CiPaw.03G228100 Carya illinoinensis
CiPaw.09G045400 Carya illinoinensis
CiPaw.10G038900 Carya illinoinensis
ClCG01G009180 Citrullus lanatus
ClCG09G007940 Citrullus lanatus
ClCG10G016030 Citrullus lanatus
COL.COLO4_21454 Corchorus olitorius
COL.COLO4_33449 Corchorus olitorius
COL.COLO4_34810 Corchorus olitorius
Cpa.g.sc115.36 Carica papaya
Cpa.g.sc12.31 Carica papaya
Cpa.g.sc5.204 Carica papaya
Cre09.g403219 Chlamydomonas reinhardtii
CsaV3_1G046360 Cucumis sativus L.
CsaV3_3G040420 Cucumis sativus L.
CsaV3_6G015700 Cucumis sativus L.
CsaV3_7G027130 Cucumis sativus L.
CSS0011207 Camellia sinensis var. sinensis
CSS0015641 Camellia sinensis var. sinensis
CSS0024247 Camellia sinensis var. sinensis
CSS0024715 Camellia sinensis var. sinensis
CSS0028523 Camellia sinensis var. sinensis
CSS0029488 Camellia sinensis var. sinensis
CSS0032586 Camellia sinensis var. sinensis
CSS0035564 Camellia sinensis var. sinensis
DCAR_012060 Daucus carota
DCAR_020548 Daucus carota
DCAR_027533 Daucus carota
DCAR_027954 Daucus carota
DCAR_028687 Daucus carota
DCAR_028701 Daucus carota
Dinv08499 Davidia involucrata
Dinv09257 Davidia involucrata
Dinv09281 Davidia involucrata
Dinv36671 Davidia involucrata
Dinv41638 Davidia involucrata
Duzib093G1916 Durio zibethinus
Duzib114G0332 Durio zibethinus
Duzib114G1000 Durio zibethinus
Duzib128G1037 Durio zibethinus
Duzib150G0179 Durio zibethinus
Duzib168G0265 Durio zibethinus
ECA234G0562 Erigeron canadensis
ECA234G2918 Erigeron canadensis
ECA234G3519 Erigeron canadensis
ECA238G1562 Erigeron canadensis
ECA248G2693 Erigeron canadensis
EL10Ac1g00144 Beta vulgaris
EL10Ac2g02825 Beta vulgaris
EL10Ac3g07213 Beta vulgaris
EL10Ac9g21491 Beta vulgaris
Eucgr.C01278 Eucalyptus grandis
Eucgr.C02179 Eucalyptus grandis
Eucgr.K01636 Eucalyptus grandis
FAN01G0624 Fragaria x ananassa
FAN01G3004 Fragaria x ananassa
FAN02G0156 Fragaria x ananassa
FAN03G1092 Fragaria x ananassa
FAN03G1825 Fragaria x ananassa
FAN03G2947 Fragaria x ananassa
FAN04G3198 Fragaria x ananassa
FAN06G0279 Fragaria x ananassa
FAN06G0813 Fragaria x ananassa
FAN06G3594 Fragaria x ananassa
FAN08G0622 Fragaria x ananassa
FAN10G0341 Fragaria x ananassa
FAN10G2632 Fragaria x ananassa
FAN10G3705 Fragaria x ananassa
FAN14G2584 Fragaria x ananassa
FAN14G4429 Fragaria x ananassa
FAN18G3630 Fragaria x ananassa
FvH4_5g21560 Fragaria vesca
FvH4_6g25210 Fragaria vesca
FvH4_7g02710 Fragaria vesca
FvH4_7g09301 Fragaria vesca
Glyma.03G129500 Glycine max
Glyma.04G141500 Glycine max
Glyma.07G084000 Glycine max
Glyma.09G192900 Glycine max
Glyma.11G154500 Glycine max
Glyma.19G131700 Glycine max
Gohir.A03G061600 Gossypium hirsutum
Gohir.A07G004700 Gossypium hirsutum
Gohir.A08G242000 Gossypium hirsutum
Gohir.A09G118700 Gossypium hirsutum
Gohir.D03G104400 Gossypium hirsutum
Gohir.D07G007500 Gossypium hirsutum
Gohir.D08G262800 Gossypium hirsutum
Gohir.D09G115442 Gossypium hirsutum
Gorai.001G007200 Gossypium raimondii
Gorai.003G110200 Gossypium raimondii
Gorai.004G280900 Gossypium raimondii
Gorai.006G133300 Gossypium raimondii
GSVIVG01000665001 Vitis vinifera
GSVIVG01015349001 Vitis vinifera
GSVIVG01033595001 Vitis vinifera
HanXRQChr03g0085031 Helianthus annuus
HanXRQChr04g0103651 Helianthus annuus
HanXRQChr05g0138911 Helianthus annuus
HanXRQChr09g0259961 Helianthus annuus
HanXRQChr11g0323871 Helianthus annuus
HanXRQChr17g0563991 Helianthus annuus
Haze_07990 Corylus avellana
Haze_16834 Corylus avellana
Haze_19718 Corylus avellana
Haze_27217 Corylus avellana
Haze_27552 Corylus avellana
Hma1.2p1_0001F.1_g001620 Hydrangea macrophylla
Hma1.2p1_0521F.1_g171480 Hydrangea macrophylla
Hma1.2p1_0831F.1_g225390 Hydrangea macrophylla
Hma1.2p1_1251F.1_g270430 Hydrangea macrophylla
HPP92_016048 Vanilla planifolia
HPP92_023101 Vanilla planifolia
HPP92_024645 Vanilla planifolia
Hund06377 Selenicereus undatus
Hund14253 Selenicereus undatus
Hund16635 Selenicereus undatus
Hund24630 Selenicereus undatus
Lalb_Chr04g0264031 Lupinus albus
Lalb_Chr09g0330881 Lupinus albus
Lalb_Chr14g0365901 Lupinus albus
Lalb_Chr14g0371661 Lupinus albus
Lalb_Chr22g0357351 Lupinus albus
Lj1g0025299 Lotus japonicus
Lj2A395G23 Lonicera japonica
Lj2C395G5 Lonicera japonica
Lj2g0011075 Lotus japonicus
Lj3g0017099 Lotus japonicus
Lj4g0022214 Lotus japonicus
Lj7A657T47 Lonicera japonica
Lj9A449T50 Lonicera japonica
Lsat_1_v5_gn_4_30101 Lactuca sativa
Lsat_1_v5_gn_4_6581 Lactuca sativa
Lsat_1_v5_gn_5_133961 Lactuca sativa
Lsat_1_v5_gn_5_159481 Lactuca sativa
Lsat_1_v5_gn_8_95720 Lactuca sativa
Manes.03G023900 Manihot esculenta
Manes.04G165700 Manihot esculenta
Manes.08G057400 Manihot esculenta
Manes.09G007600 Manihot esculenta
Manes.16G112700 Manihot esculenta
Mapoly0051s0089 Marchantia polymorpha
MBI11_g32500_MAGBIO Magnolia biondii
MBI19_g18423_MAGBIO Magnolia biondii
MBI19_g39111_MAGBIO Magnolia biondii
MBI19_g46019_MAGBIO Magnolia biondii
MCO03G593 Micromonas commoda
MD00G1170800 Malus domestica
MD02G1080800 Malus domestica
MD02G1093900 Malus domestica
MD07G1036700 Malus domestica
MD12G1081300 Malus domestica
MD14G1084600 Malus domestica
MD15G1208600 Malus domestica
Medtr3g018620 Medicago truncatula
Medtr3g058520 Medicago truncatula
Medtr5g005470 Medicago truncatula
Medtr5g016200 Medicago truncatula
Medtr5g016220 Medicago truncatula
Medtr6g042230 Medicago truncatula
Medtr6g088010 Medicago truncatula
Medtr6g088020 Medicago truncatula
Medtr7g090220 Medicago truncatula
MELO3C009776.2 Cucumis melo
MELO3C015712.2 Cucumis melo
MELO3C019700.2 Cucumis melo
MELO3C021758.2 Cucumis melo
Migut.B01217 Erythranthe guttata
Migut.C00444 Erythranthe guttata
Migut.J01678 Erythranthe guttata
Migut.N03321 Erythranthe guttata
MSTRG.1488 Avicennia marina
MSTRG.6383 Avicennia marina
Nitab4.5_0000175g0350 Nicotiana tabacum
Nitab4.5_0000254g0240 Nicotiana tabacum
Nitab4.5_0001066g0010 Nicotiana tabacum
Nitab4.5_0001769g0070 Nicotiana tabacum
Nitab4.5_0003134g0160 Nicotiana tabacum
Nitab4.5_0007950g0020 Nicotiana tabacum
Nitab4.5_0008307g0010 Nicotiana tabacum
Nitab4.5_0012293g0030 Nicotiana tabacum
Nn2g14902 Nelumbo nucifera
Nn7g37941 Nelumbo nucifera
Oeu017863.1 Olea europaea
Oeu054494.1 Olea europaea
Oeu057803.2 Olea europaea
Os01g0805800 Oryza sativa ssp. japonica
Os04g0487300 Oryza sativa ssp. japonica
Os11g0143400 Oryza sativa ssp. japonica
Os12g0139500 Oryza sativa ssp. japonica
Peaxi162Scf00088g00162 Petunia axillaris
Peaxi162Scf00295g00014 Petunia axillaris
Peaxi162Scf00502g00082 Petunia axillaris
Peaxi162Scf00660g00117 Petunia axillaris
PGR044G1432 Punica granatum
PGR102G1593 Punica granatum
PGR142G0705 Punica granatum
PGSC0003DMG400010646 Solanum tuberosum
PGSC0003DMG400019984 Solanum tuberosum
PGSC0003DMG400027218 Solanum tuberosum
PGSC0003DMG400030104 Solanum tuberosum
PGSC0003DMG401022480 Solanum tuberosum
PGSC0003DMG402022480 Solanum tuberosum
Phvul.001G125200 Phaseolus vulgaris
Phvul.004G166200 Phaseolus vulgaris
Phvul.005G029700 Phaseolus vulgaris
Potri.001G025500 Populus trichocarpa
Potri.001G179300 Populus trichocarpa
Potri.003G200450 Populus trichocarpa
Potri.006G161600 Populus trichocarpa
Potri.016G038500 Populus trichocarpa
Potri.T127006 Populus trichocarpa
Pp3c10_21990 Physcomitrium patens
Pp3c25_14420 Physcomitrium patens
Pp3c6_19940 Physcomitrium patens
PRCOL_00003323 Prasinoderma coloniale
Prupe.2G032100 Prunus persica
Prupe.2G121300 Prunus persica
Prupe.2G121400 Prunus persica
Prupe.7G043600 Prunus persica
Psat1g044160 Pisum sativum
Psat3g077800 Pisum sativum
Psat4g227120 Pisum sativum
Psat5g217600 Pisum sativum
PSO017G1891 Papaver somniferum
PSO063G2864 Papaver somniferum
PSO063G6586 Papaver somniferum
PSO339G6570 Papaver somniferum
PSO384G3462 Papaver somniferum
PSO541G5648 Papaver somniferum
PSO675G8660 Papaver somniferum
QL02p103687 Quercus lobata
QL04p014286 Quercus lobata
QL07p008420 Quercus lobata
QL07p008705 Quercus lobata
QL07p038125 Quercus lobata
QL11p009279 Quercus lobata
RcHm_v2.0_Chr1g0321871 Rosa chinensis
RcHm_v2.0_Chr1g0321951 Rosa chinensis
RcHm_v2.0_Chr1g0332791 Rosa chinensis
RcHm_v2.0_Chr1g0344101 Rosa chinensis
RcHm_v2.0_Chr1g0344151 Rosa chinensis
RcHm_v2.0_Chr1g0344171 Rosa chinensis
RcHm_v2.0_Chr1g0345361 Rosa chinensis
RcHm_v2.0_Chr1g0345421 Rosa chinensis
RcHm_v2.0_Chr1g0345561 Rosa chinensis
RcHm_v2.0_Chr1g0345591 Rosa chinensis
RcHm_v2.0_Chr1g0345671 Rosa chinensis
RcHm_v2.0_Chr1g0345701 Rosa chinensis
RcHm_v2.0_Chr1g0345711 Rosa chinensis
RcHm_v2.0_Chr1g0345721 Rosa chinensis
RcHm_v2.0_Chr1g0345801 Rosa chinensis
RcHm_v2.0_Chr1g0345851 Rosa chinensis
RcHm_v2.0_Chr1g0345901 Rosa chinensis
RcHm_v2.0_Chr1g0345921 Rosa chinensis
RcHm_v2.0_Chr1g0345931 Rosa chinensis
RcHm_v2.0_Chr1g0345951 Rosa chinensis
RcHm_v2.0_Chr1g0345961 Rosa chinensis
RcHm_v2.0_Chr2g0125071 Rosa chinensis
RcHm_v2.0_Chr3g0472601 Rosa chinensis
RcHm_v2.0_Chr7g0208981 Rosa chinensis
Rhsim01G0112000 Rhododendron simsii
Rhsim01G0122100 Rhododendron simsii
Rhsim03G0008600 Rhododendron simsii
Rhsim10G0003200 Rhododendron simsii
Sabra06G0124700 Salix brachista
Sabra16G0040300 Salix brachista
Sabra16G0045000 Salix brachista
Sabra16G0045100 Salix brachista
SalBow6G1313 Salvia bowleyana
SalBow6G2362 Salvia bowleyana
SalBow7G3230 Salvia bowleyana
SalBow7G3828 Salvia bowleyana
Sc13g0001300 Simmondsia chinensis
Sc21g0002320 Simmondsia chinensis
Sed0005510 Sechium edule
Sed0006373 Sechium edule
Sed0010540 Sechium edule
Sed0018242 Sechium edule
Sed0023452 Sechium edule
SEGI_05608 Sequoiadendron giganteum
SEGI_11519 Sequoiadendron giganteum
SEGI_31612 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30325 Striga asiatica
SGA_v2.0_scaffold28G12031 Striga asiatica
SGA_v2.0_scaffold96G28930 Striga asiatica
SHI28263 Sapria himalayana
SHI32725 Sapria himalayana
SMO201G0215 Selaginella moellendorffii
Solyc01g098320.4 Solanum lycopersicum
Solyc03g025570.2 Solanum lycopersicum
Solyc04g040170.3 Solanum lycopersicum
Solyc05g051790.3 Solanum lycopersicum
Sopen01g041880 Solanum pennellii
Sopen03g004420 Solanum pennellii
Sopen04g009960 Solanum pennellii
Sopen05g030270 Solanum pennellii
Sopen05g032010 Solanum pennellii
Sp3g20110 Schrenkiella parvula
Sp4g23630 Schrenkiella parvula
Sp5g05500 Schrenkiella parvula
Sp5g07930 Schrenkiella parvula
Sp6g19640 Schrenkiella parvula
Sp6g24560 Schrenkiella parvula
TAR381G0564 Trochodendron aralioides
TAR628G1577 Trochodendron aralioides
TAR633G1527 Trochodendron aralioides
THA.LOC104803274 Tarenaya hassleriana
THA.LOC104808908 Tarenaya hassleriana
THA.LOC104811068 Tarenaya hassleriana
THA.LOC104824188 Tarenaya hassleriana
Thecc.05G140300 Theobroma cacao
Thecc.09G105800 Theobroma cacao
Thecc.09G193300 Theobroma cacao
Thecc.10G166600 Theobroma cacao
Thhalv10006218m.g Eutrema salsugineum
Thhalv10011060m.g Eutrema salsugineum
Thhalv10015571m.g Eutrema salsugineum
Thhalv10015613m.g Eutrema salsugineum
Thhalv10017724m.g Eutrema salsugineum
Thhalv10021534m.g Eutrema salsugineum
TPR.G19698 Trifolium pratense
TPR.G20952 Trifolium pratense
TPR.G22698 Trifolium pratense
TPR.G22699 Trifolium pratense
TPR.G28420 Trifolium pratense
TPR.G32074 Trifolium pratense
TPR.G8331 Trifolium pratense
TPR.G9316 Trifolium pratense
TWI34G0972 Tripterygium wilfordii
TWI38G1653 Tripterygium wilfordii
TWI60G0293 Tripterygium wilfordii
TWI63G0341 Tripterygium wilfordii
TWI77G0613 Tripterygium wilfordii
unitig_699.g19823 Utricularia gibba
vmacro07817 Vaccinium macrocarpon
vmacro07932 Vaccinium macrocarpon
vmacro16529 Vaccinium macrocarpon
vmacro20776 Vaccinium macrocarpon
VMungo0251G3705 Vigna mungo
VMungo0464G1702 Vigna mungo
VMungo0464G1776 Vigna mungo
VMungo1080G0211 Vigna mungo
VMungo1383G0914 Vigna mungo
Zm00001eb079110 Zea mays
Zm00001eb093130 Zea mays
Zm00001eb185150 Zea mays
Zm00001eb369320 Zea mays

User provided reference genes

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