Gene: COL.COLO4_33449

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_33449
  • Transcript Identifier COL.rna32150
  • Gene Type Coding gene
  • Location AWUE01021680.1 : 8335-11739 : negative

Gene Family Information

  • ID HOM05D001296
  • #Genes/#Species 485/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna32150
  • GenBank OMO61362.1
  • id gene33421
  • gene_name COLO4_33449
  • uniprot A0A1R3GTF8

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
GOA Databasetranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003899
IEA
GOA DatabaseDNA-directed 5'-3' RNA polymerase activity
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036710 RNA polymerase Rpb5, N-terminal domain superfamily
IPR014381 DNA-directed RNA polymerase RPB5 subunit, eukaryote/virus
IPR005571 RNA polymerase, Rpb5, N-terminal
IPR035913 RPB5-like RNA polymerase subunit superfamily
IPR000783 RNA polymerase, subunit H/Rpb5 C-terminal
IPR039531 DNA-directed RNA polymerase subunit Rpb5-like
Mapman id Description
15.1.6.3 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 5