Gene: Lj1g0025299

General Information

Structural Information

  • Species Lotus japonicus
  • Gene Identifier Lj1g0025299
  • Transcript Identifier Lj1g0025299.1
  • Gene Type Coding gene
  • Location chr1 : 14477769-14480459 : positive

Gene Family Information

  • ID HOM05D001296
  • #Genes/#Species 485/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lj1g0025299.Lj1.0v1
  • pacid 44912756

Descriptions

  • Description PTHR10535//PTHR10535:SF2 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 // DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G57080

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000419
ISO
PLAZA Integrative OrthologyRNA polymerase V complex AT3G57080
GO:0000418
ISO
PLAZA Integrative OrthologyRNA polymerase IV complex AT2G41340

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036710 RNA polymerase Rpb5, N-terminal domain superfamily
IPR005571 RNA polymerase, Rpb5, N-terminal
IPR014381 DNA-directed RNA polymerase RPB5 subunit, eukaryote/virus
IPR000783 RNA polymerase, subunit H/Rpb5 C-terminal
IPR035913 RPB5-like RNA polymerase subunit superfamily
IPR039531 DNA-directed RNA polymerase subunit Rpb5-like
Mapman id Description
15.1.6.3 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 5