Gene: ATR0605G142

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0605G142
  • Transcript Identifier ATR0605G142.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00022 : 230737-238528 : positive

Gene Family Information

  • ID HOM05D001296
  • #Genes/#Species 485/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00022.16.v1.0
  • pacid 31552358

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000418
ISO
PLAZA Integrative OrthologyRNA polymerase IV complex AT3G22320
GO:0005665
ISO
PLAZA Integrative OrthologyRNA polymerase II, core complex AT3G22320

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035913 RPB5-like RNA polymerase subunit superfamily
IPR036710 RNA polymerase Rpb5, N-terminal domain superfamily
IPR000783 RNA polymerase, subunit H/Rpb5 C-terminal
IPR005571 RNA polymerase, Rpb5, N-terminal
IPR039531 DNA-directed RNA polymerase subunit Rpb5-like
Mapman id Description
15.1.6.3 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 5