Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15772 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 3.7e-241 838.2 551 100.0
RhsimUnG0025700 Rhododendron simsii HOM05D003850 ORTHO05D004515 3.7e-209 731.9 599 77.8
RhsimUnG0028500 Rhododendron simsii HOM05D003850 ORTHO05D004515 3.7e-209 731.9 599 77.8
CSS0032808 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 2.9e-198 695.7 554 74.7
CSS0007684 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 6.1e-196 688.0 558 78.7
QL05p069776 Quercus lobata HOM05D003850 ORTHO05D004515 9.8e-186 654.1 556 72.8
TAR624G0821 Trochodendron aralioides HOM05D003850 ORTHO05D004515 4.6e-183 645.2 556 73.2
CiPaw.09G102000 Carya illinoinensis HOM05D003850 ORTHO05D004515 1.5e-181 640.2 555 75.3
Nn1g03331 Nelumbo nucifera HOM05D003850 ORTHO05D004515 7.3e-181 637.9 557 72.9
GSVIVG01003352001 Vitis vinifera HOM05D003850 ORTHO05D004515 6.8e-179 631.3 556 76.4
Potri.006G009100 Populus trichocarpa HOM05D003850 ORTHO05D004515 5.8e-178 628.2 554 72.2
CANSAT56G0590 Cannabis sativa HOM05D003850 ORTHO05D004515 4.1e-176 622.1 555 68.8
MSTRG.7170 Avicennia marina HOM05D003850 ORTHO05D004515 7.1e-176 621.3 554 71.8
Duzib160G0220 Durio zibethinus HOM05D003850 ORTHO05D004515 1.2e-175 620.5 570 72.1
Cc09_g00920 Coffea canephora HOM05D003850 ORTHO05D004515 2.1e-175 619.8 554 75.5
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 2.1e-175 619.8 554 72.4
Ciclev10014841m.g Citrus clementina HOM05D003850 ORTHO05D004515 7.8e-175 617.8 557 71.1
Aqoxy1G04110 Aquilegia oxysepala HOM05D003850 ORTHO05D004515 2.5e-173 612.8 556 65.1
Eucgr.E03951 Eucalyptus grandis HOM05D003850 ORTHO05D004515 7.3e-173 611.3 560 72.3
TAR629G2665 Trochodendron aralioides HOM05D003850 ORTHO05D004515 3.6e-172 609.0 553 71.1
Atru.chr1.2461 Acer truncatum HOM05D003850 ORTHO05D004515 1.8e-171 606.7 559 70.5
arahy.Tifrunner.gnm1.ann1.C17RPB Arachis hypogaea HOM05D003850 ORTHO05D004515 8.6e-166 587.8 556 65.6
Oeu002760.2 Olea europaea HOM05D003850 ORTHO05D004515 8.6e-166 587.8 588 68.7
Gohir.A06G153120 Gossypium hirsutum HOM05D003850 ORTHO05D004515 3.3e-165 585.9 568 75.7
Migut.M01390 Erythranthe guttata HOM05D003850 ORTHO05D004515 9.6e-165 584.3 551 64.2
Thecc.06G232700 Theobroma cacao HOM05D003850 ORTHO05D004515 2.1e-164 583.2 568 69.2
PSO210G4264 Papaver somniferum HOM05D003850 ORTHO05D004515 3.6e-164 582.4 559 67.1
arahy.Tifrunner.gnm1.ann1.IIR6TV Arachis hypogaea HOM05D003850 ORTHO05D004515 1.4e-163 580.5 558 65.6
Manes.07G088900 Manihot esculenta HOM05D003850 ORTHO05D004515 4.0e-163 578.9 551 70.4
Gorai.010G186300 Gossypium raimondii HOM05D003850 ORTHO05D004515 8.9e-163 577.8 568 74.8
SalBow8G5272 Salvia bowleyana HOM05D003850 ORTHO05D004515 1.5e-162 577.0 565 68.0
MBI16_g42266_MAGBIO Magnolia biondii HOM05D003850 ORTHO05D004515 2.0e-162 576.6 556 67.6
VMungo1215G3075 Vigna mungo HOM05D003850 ORTHO05D004515 2.6e-162 576.2 557 68.9
Glyma.09G009900 Glycine max HOM05D003850 ORTHO05D004515 4.4e-162 575.5 555 67.2
PGR102G0753 Punica granatum HOM05D003850 ORTHO05D004515 9.9e-162 574.3 557 72.0
CsaV3_3G028740 Cucumis sativus L. HOM05D003850 ORTHO05D004515 1.7e-161 573.5 555 67.0
Gohir.D06G159600 Gossypium hirsutum HOM05D003850 ORTHO05D004515 2.9e-161 572.8 568 75.0
THA.LOC104812992 Tarenaya hassleriana HOM05D003850 ORTHO05D004515 3.8e-161 572.4 564 65.6
Phvul.003G083500 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 4.9e-161 572.0 557 70.2
Sopen11g006940 Solanum pennellii HOM05D003850 ORTHO05D004515 8.4e-161 571.2 551 63.7
Ca_00718_v3 Cicer arietinum L. HOM05D003850 ORTHO05D004515 2.4e-160 569.7 556 64.9
Phvul.006G143600 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 1.2e-159 567.4 558 63.4
Nitab4.5_0001198g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 2.1e-159 566.6 544 64.7
COL.COLO4_31876 Corchorus olitorius HOM05D003850 ORTHO05D004515 3.5e-159 565.8 566 70.7
ECA233G3046 Erigeron canadensis HOM05D003850 ORTHO05D004515 1.7e-158 563.5 563 72.6
Sed0003006 Sechium edule HOM05D003850 ORTHO05D004515 1.7e-158 563.5 557 65.0
Prupe.4G011300 Prunus persica HOM05D003850 ORTHO05D004515 5.1e-158 562.0 556 63.8
VMungo0540G1287 Vigna mungo HOM05D003850 ORTHO05D004515 8.7e-158 561.2 557 62.8
Potri.016G015100 Populus trichocarpa HOM05D003850 ORTHO05D004515 5.6e-157 558.5 554 67.3
Cfa000110 Carpinus fangiana HOM05D003850 ORTHO05D004515 2.8e-156 556.2 557 69.1
SGA_v2.0_scaffold4G01878 Striga asiatica HOM05D003850 ORTHO05D004515 3.6e-156 555.8 539 69.6
ATR0751G086 Amborella trichopoda HOM05D003850 ORTHO05D004515 6.2e-156 555.1 563 65.2
Sabra06G0006900 Salix brachista HOM05D003850 ORTHO05D004515 8.1e-156 554.7 557 64.6
HPP92_001629 Vanilla planifolia HOM05D003850 ORTHO05D004515 9.9e-154 547.7 550 60.0
ClCG07G001740 Citrullus lanatus HOM05D003850 ORTHO05D004515 2.2e-153 546.6 555 65.0
arahy.Tifrunner.gnm1.ann1.97WSNQ Arachis hypogaea HOM05D003850 ORTHO05D004515 1.1e-152 544.3 570 65.1
Lalb_Chr20g0119201 Lupinus albus HOM05D003850 ORTHO05D004515 2.4e-152 543.1 557 62.8
Medtr2g025590 Medicago truncatula HOM05D003850 ORTHO05D004515 3.2e-152 542.7 557 68.9
arahy.Tifrunner.gnm1.ann1.0C9QHL Arachis hypogaea HOM05D003850 ORTHO05D004515 5.4e-152 542.0 572 68.0
TPR.G3343 Trifolium pratense HOM05D003850 ORTHO05D004515 9.3e-152 541.2 579 63.2
Haze_08659 Corylus avellana HOM05D003850 ORTHO05D004515 1.3e-150 537.3 598 61.9
PSO302G0165 Papaver somniferum HOM05D003850 ORTHO05D004515 1.3e-150 537.3 557 65.5
Cpa.g.sc75.120 Carica papaya HOM05D003850 ORTHO05D004515 7.4e-149 531.6 556 67.3
Sabra16G0017100 Salix brachista HOM05D003850 ORTHO05D004515 2.1e-148 530.0 586 59.2
MD05G1357300 Malus domestica HOM05D003850 ORTHO05D004515 1.1e-147 527.7 560 64.5
TWI63G0294 Tripterygium wilfordii HOM05D003850 ORTHO05D004515 1.5e-146 523.9 526 68.4
FAN25G3770 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.0e-146 523.5 585 57.6
Lj2A262G45 Lonicera japonica HOM05D003850 ORTHO05D004515 2.6e-146 523.1 526 67.3
Sabra16G0000900 Salix brachista HOM05D003850 ORTHO05D004515 2.6e-146 523.1 563 56.5
Glyma.15G114200 Glycine max HOM05D003850 ORTHO05D004515 4.5e-146 522.3 555 62.2
Nitab4.5_0000143g0310 Nicotiana tabacum HOM05D003850 ORTHO05D004515 2.2e-145 520.0 544 62.5
SEGI_18521 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 7.1e-144 515.0 565 66.2
AL6G47570 Arabidopsis lyrata HOM05D003850 ORTHO05D004515 1.2e-143 514.2 561 66.7
Actinidia39269 Actinidia chinensis HOM05D003850 ORTHO05D004515 2.1e-143 513.5 370 78.6
Aa31LG9G10040 Aethionema arabicum HOM05D003850 ORTHO05D004515 3.5e-143 512.7 569 63.8
Peaxi162Scf00558g00516 Petunia axillaris HOM05D003850 ORTHO05D004515 1.3e-142 510.8 496 67.5
CiPaw.10G077600 Carya illinoinensis HOM05D003850 ORTHO05D004515 1.1e-141 507.7 505 61.8
PGSC0003DMG400013344 Solanum tuberosum HOM05D003850 ORTHO05D004515 5.6e-141 505.4 515 62.7
Carub.0006s3188 Capsella rubella HOM05D003850 ORTHO05D004515 7.4e-141 505.0 561 68.6
FvH4_3g01042 Fragaria vesca HOM05D003850 ORTHO05D004515 2.8e-140 503.1 573 57.2
CAN.G1186.28 Capsicum annuum HOM05D003850 ORTHO05D004515 8.2e-140 501.5 554 60.1
Solyc11g012150.3 Solanum lycopersicum HOM05D003850 ORTHO05D004515 1.1e-139 501.1 514 62.1
AT4G12610 Arabidopsis thaliana HOM05D003850 ORTHO05D004515 1.8e-139 500.4 562 66.2
AUR62021872 Chenopodium quinoa HOM05D003850 ORTHO05D004515 3.1e-139 499.6 556 54.5
C03p36090 Brassica napus HOM05D003850 ORTHO05D004515 9.0e-139 498.0 561 70.1
HanXRQChr15g0470091 Helianthus annuus HOM05D003850 ORTHO05D004515 1.5e-138 497.3 540 68.1
BcaC01g04577 Brassica carinata HOM05D003850 ORTHO05D004515 5.8e-138 495.4 563 69.8
BolC3t15918H Brassica oleracea HOM05D003850 ORTHO05D004515 5.8e-138 495.4 563 69.8
Lj4g0025543 Lotus japonicus HOM05D003850 ORTHO05D004515 7.6e-138 495.0 558 60.6
FAN21G1422 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.0e-137 494.6 581 56.3
vmacro03646 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 1.3e-137 494.2 583 55.9
A03p29830 Brassica napus HOM05D003850 ORTHO05D004515 4.9e-137 492.3 561 69.5
BraA03t12173Z Brassica rapa HOM05D003850 ORTHO05D004515 1.9e-136 490.3 563 68.4
SHI24464 Sapria himalayana HOM05D003850 ORTHO05D004515 4.2e-136 489.2 546 53.8
Lj6g0013016 Lotus japonicus HOM05D003850 ORTHO05D004515 9.3e-136 488.0 560 66.2
RcHm_v2.0_Chr5g0001581 Rosa chinensis HOM05D003850 ORTHO05D004515 2.7e-135 486.5 573 59.2
PSO339G3925 Papaver somniferum HOM05D003850 ORTHO05D004515 7.9e-135 485.0 562 62.1
Lj8A171G42 Lonicera japonica HOM05D003850 ORTHO05D004515 8.7e-134 481.5 561 53.5
MD10G1331000 Malus domestica HOM05D003850 ORTHO05D004515 1.1e-133 481.1 526 66.0
BcaB01g01757 Brassica carinata HOM05D003850 ORTHO05D004515 1.5e-133 480.7 547 66.4
Oeu044421.3 Olea europaea HOM05D003850 ORTHO05D004515 9.7e-133 478.0 848 45.3
CARHR253560 Cardamine hirsuta HOM05D003850 ORTHO05D004515 1.2e-130 471.1 556 65.8
Sp6g04900 Schrenkiella parvula HOM05D003850 ORTHO05D004515 5.0e-129 465.7 583 62.8
unitig_748.g7103 Utricularia gibba HOM05D003850 ORTHO05D004515 6.5e-129 465.3 549 57.2
Hund23984 Selenicereus undatus HOM05D003850 ORTHO05D004515 4.2e-128 462.6 570 61.1
Thhalv10028564m.g Eutrema salsugineum HOM05D003850 ORTHO05D004515 3.6e-127 459.5 556 64.6
Lsat_1_v5_gn_7_13561 Lactuca sativa HOM05D003850 ORTHO05D004515 3.6e-127 459.5 512 68.9
BcaB01g02623 Brassica carinata HOM05D003850 ORTHO05D004515 1.8e-123 447.2 550 66.0
EL10Ac8g20176 Beta vulgaris HOM05D003850 ORTHO05D004515 4.1e-123 446.0 560 60.2
BolC9t56221H Brassica oleracea HOM05D003850 ORTHO05D004515 5.3e-123 445.7 559 60.3
MELO3C012788.2 Cucumis melo HOM05D003850 ORTHO05D004515 6.5e-121 438.7 479 65.6
Zm00001eb224360 Zea mays HOM05D003850 ORTHO05D004515 2.5e-120 436.8 495 59.0
RhsimUnG0109100 Rhododendron simsii HOM05D003850 ORTHO05D004515 4.6e-119 432.6 558 54.1
CDE04G2591 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 6.1e-119 432.2 558 57.5
BraA09t38246Z Brassica rapa HOM05D003850 ORTHO05D004515 6.7e-118 428.7 569 56.1
A09p26740 Brassica napus HOM05D003850 ORTHO05D004515 1.9e-112 410.6 553 57.9
Rhsim13G0146600 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.6e-111 407.5 612 49.3
Psat1g176560 Pisum sativum HOM05D003850 ORTHO05D004515 2.1e-111 407.1 486 63.6
BcaC04g21251 Brassica carinata HOM05D003850 ORTHO05D004515 1.0e-110 404.8 549 60.3
C09p33830 Brassica napus HOM05D003850 ORTHO05D004515 1.0e-110 404.8 549 60.3
RcHm_v2.0_Chr5g0007791 Rosa chinensis HOM05D003850 ORTHO05D004515 3.1e-107 393.3 566 50.9
Mapoly0105s0015 Marchantia polymorpha HOM05D003850 ORTHO05D004515 2.0e-106 390.6 561 56.0
CDE06G1774 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 2.2e-105 387.1 335 64.2
Pp3c3_2280 Physcomitrium patens HOM05D003850 ORTHO05D004515 8.8e-102 375.2 568 50.2
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 4.8e-100 369.4 456 64.0
Duzib235G1223 Durio zibethinus HOM05D003850 ORTHO05D004515 1.5e-96 357.8 426 67.1
FAN11G3915 Fragaria x ananassa HOM05D003850 ORTHO05D004515 8.8e-94 348.6 565 44.1
FvH4_3g04782 Fragaria vesca HOM05D003850 ORTHO05D004515 1.5e-93 347.8 565 44.1
Zm00001eb398520 Zea mays HOM05D003850 ORTHO05D004515 2.0e-93 347.4 551 41.4
FvH4_2g22070 Fragaria vesca HOM05D003850 ORTHO05D004515 9.8e-93 345.1 563 43.2
Medtr2g025620 Medicago truncatula HOM05D003850 ORTHO05D004515 9.8e-93 345.1 558 52.3
FAN16G3024 Fragaria x ananassa HOM05D003850 ORTHO05D004515 8.3e-92 342.0 563 43.9
FAN21G1676 Fragaria x ananassa HOM05D003850 ORTHO05D004515 4.1e-91 339.7 565 43.5
FAN03G2951 Fragaria x ananassa HOM05D003850 ORTHO05D004515 9.1e-91 338.6 565 43.4
QL09p006300 Quercus lobata HOM05D003850 ORTHO05D004515 1.2e-90 338.2 364 68.4
FAN24G0125 Fragaria x ananassa HOM05D003850 ORTHO05D008045 2.0e-90 337.4 563 43.0
Dinv07398 Davidia involucrata HOM05D003850 ORTHO05D004515 2.2e-84 317.4 324 77.5
AUR62012783 Chenopodium quinoa HOM05D003850 ORTHO05D004515 3.5e-82 310.1 435 49.0
TPR.G34491 Trifolium pratense HOM05D003850 ORTHO05D004515 8.6e-81 305.4 208 71.6
AagrBONN_evm.TU.Sc2ySwM_228.4136 Anthoceros agrestis HOM05D003850 ORTHO05D004515 1.7e-76 291.2 363 52.9
TPR.G13041 Trifolium pratense HOM05D003850 ORTHO05D004515 4.1e-75 286.6 365 66.6
Actinidia11880 Actinidia chinensis HOM05D003850 ORTHO05D004515 3.7e-68 263.5 290 63.4
Peaxi162Scf00015g02110 Petunia axillaris HOM05D003850 ORTHO05D004515 1.2e-63 248.4 326 53.7
SEGI_38016 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 6.2e-63 246.1 321 48.9
Sc17g0007710 Simmondsia chinensis HOM05D003850 ORTHO05D004515 8.3e-60 235.7 380 60.5
FAN25G2646 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.3e-52 211.8 520 35.8
HPP92_001646 Vanilla planifolia HOM05D003850 ORTHO05D004515 6.2e-47 193.0 258 55.0
HPP92_001645 Vanilla planifolia HOM05D003850 ORTHO05D004515 2.0e-37 161.4 101 74.3
Gorai.002G145900 Gossypium raimondii HOM05D003850 ORTHO05D004515 1.1e-35 155.6 177 74.6
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 8.7e-33 146.0 166 69.9
CBR_g38333 Chara braunii HOM05D000019 ORTHO05D000002 3.2e-27 127.5 254 37.4
PSO339G5270 Papaver somniferum HOM05D003850 ORTHO05D004515 2.5e-24 117.9 211 46.4
AagrBONN_evm.TU.Sc2ySwM_228.3786 Anthoceros agrestis HOM05D003850 ORTHO05D004515 8.2e-23 112.8 140 43.6
CDE06G0619 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 1.3e-20 105.5 206 44.7
PSO384G4333 Papaver somniferum HOM05D003850 ORTHO05D004515 1.7e-20 105.1 169 47.3
Gohir.D01G119450 Gossypium hirsutum HOM05D003850 ORTHO05D004515 6.5e-20 103.2 103 65.0
HPP92_001647 Vanilla planifolia HOM05D003850 ORTHO05D004515 4.2e-19 100.5 61 83.6
RcHm_v2.0_Chr6g0288941 Rosa chinensis HOM05D003850 ORTHO05D004515 7.1e-19 99.8 297 34.0
Lsat_1_v5_gn_3_78300 Lactuca sativa HOM05D002115 ORTHO05D002263 1.0e-17 95.9 52 88.5
Eucgr.A01650 Eucalyptus grandis HOM05D002251 ORTHO05D004515 1.8e-17 95.1 54 72.2
TAR629G2548 Trochodendron aralioides HOM05D003850 ORTHO05D004515 3.9e-17 94.0 327 27.2
VMungo0720G0179 Vigna mungo HOM05D003850 ORTHO05D004515 5.7e-16 90.1 49 83.7
arahy.Tifrunner.gnm1.ann1.N7GRQP Arachis hypogaea HOM05D003850 ORTHO05D004515 7.4e-16 89.7 67 71.6
arahy.Tifrunner.gnm1.ann1.UE8YUV Arachis hypogaea HOM05D003850 ORTHO05D004515 7.4e-16 89.7 67 71.6
SEGI_29277 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 4.8e-15 87.0 206 36.4
AagrBONN_evm.TU.Sc2ySwM_228.3787 Anthoceros agrestis HOM05D003850 ORTHO05D004515 8.2e-15 86.3 255 33.3
FAN21G0780 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.8e-14 85.1 208 39.9
CAN.G1186.27 Capsicum annuum HOM05D001620 ORTHO05D005461 5.3e-14 83.6 59 66.1
Nitab4.5_0013082g0020 Nicotiana tabacum HOM05D003850 ORTHO05D004515 2.6e-13 81.3 63 66.7
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 4.5e-13 80.5 63 65.1
arahy.Tifrunner.gnm1.ann1.4A53N1 Arachis hypogaea HOM05D003850 ORTHO05D004515 1.0e-12 79.3 70 65.7
arahy.Tifrunner.gnm1.ann1.5H9H8Z Arachis hypogaea HOM05D003850 ORTHO05D004515 2.9e-12 77.8 147 42.2
Nitab4.5_0006771g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 2.9e-12 77.8 64 67.2
SEGI_19210 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 1.6e-10 72.0 122 34.4
arahy.Tifrunner.gnm1.ann1.GFC3N0 Arachis hypogaea HOM05D003850 ORTHO05D004515 3.9e-09 67.4 51 68.6
Aa31LG9G10030 Aethionema arabicum HOM05D003850 ORTHO05D004515 9.7e-08 62.8 54 63.0
CARHR253550 Cardamine hirsuta HOM05D003850 ORTHO05D004515 1.7e-07 62.0 63 54.0
CBR_g38329 Chara braunii HOM05D003850 ORTHO05D004515 3.1e-06 57.8 60 45.0


User provided reference genes

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