Gene: Sopen11g006940

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g006940
  • Transcript Identifier Sopen11g006940.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 5138748-5145934 : negative

Gene Family Information

  • ID HOM05D003850
  • #Genes/#Species 180/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g006940.1

Descriptions

  • Description Transcription initiation factor IIF, alpha subunit, RAP74 | FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity, DNA binding, transcription activator activity, catalytic activity | INVOLVED IN: transcription initiation from RNA polymerase II promoter, positive regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: shoot, root, guard cell | CONTAINS InterPro DOMAIN/s: Transcription initiation factor IIF, alpha subunit , Transcription Factor IIF, Rap30/Rap74, interaction
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006367
IEA
InterProtranscription initiation from RNA polymerase II promoter
GO:0032968
IEA
InterPropositive regulation of transcription elongation from RNA polymerase II promoter

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G12610
GO:0008022
ISO
PLAZA Integrative Orthologyprotein C-terminus binding AT4G12610

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR011039 Transcription Factor IIF, Rap30/Rap74, interaction
IPR008851 Transcription initiation factor IIF, alpha subunit
IPR036390 Winged helix DNA-binding domain superfamily
Mapman id Description
15.3.3.4.1 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIf basal transcription factor heterodimer.subunit alpha