Gene: Nn1g07354
General Information
Structural Information
- Species Nelumbo nucifera
- Gene Identifier Nn1g07354
- Transcript Identifier Nn1g07354.1
- Gene Type Coding gene
- Location chr1 : 151141719-151220919 : negative
Gene Family Information
- ID HOM05D003850
- #Genes/#Species 180/94
- Phylogenetic origin
- ID ORTHO05D004515
- #Genes/#Species 178/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Nn1g07354.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006367 | IEA | InterPro | transcription initiation from RNA polymerase II promoter | |
| GO:0032968 | IEA | InterPro | positive regulation of transcription elongation from RNA polymerase II promoter |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G12610 |
| GO:0008022 | ISO | PLAZA Integrative Orthology | protein C-terminus binding | AT4G12610 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR008851 | Transcription initiation factor IIF, alpha subunit |
| IPR011039 | Transcription Factor IIF, Rap30/Rap74, interaction |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR043151 | Bromo adjacent homology (BAH) domain superfamily |
| IPR011011 | Zinc finger, FYVE/PHD-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR001965 | Zinc finger, PHD-type |
| IPR019787 | Zinc finger, PHD-finger |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 15.3.3.4.1 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIf basal transcription factor heterodimer.subunit alpha |