Gene: CBR_g38333
General Information
Structural Information
- Species Chara braunii
- Gene Identifier CBR_g38333
- Transcript Identifier GBG84361
- Gene Type Coding gene
- Location BFEA01000473 : 725802-856096 : negative
Gene Family Information
- ID HOM05D000019
- #Genes/#Species 6761/20
- Phylogenetic origin
- ID ORTHO05D000002
- #Genes/#Species 15655/89
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid GBG84361
- uniprot A0A388LQ06
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006367 | IEA | GOA Database | transcription initiation from RNA polymerase II promoter | |
| GO:0006367 | IEA | InterPro | transcription initiation from RNA polymerase II promoter | |
| GO:0032968 | IEA | GOA Database | positive regulation of transcription elongation from RNA polymerase II promoter | |
| GO:0032968 | IEA | InterPro | positive regulation of transcription elongation from RNA polymerase II promoter | |
| GO:0015074 | IEA | GOA Database | DNA integration |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR041588 | Integrase zinc-binding domain |
| IPR008851 | Transcription initiation factor IIF, alpha subunit |
| IPR041577 | Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR000477 | Reverse transcriptase domain |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR036397 | Ribonuclease H superfamily |
| IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
| IPR011039 | Transcription Factor IIF, Rap30/Rap74, interaction |
| Mapman id | Description |
|---|---|
| 15.3.3.4.1 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIf basal transcription factor heterodimer.subunit alpha |