Gene: SGA_v2.0_scaffold4G01878

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold4G01878
  • Transcript Identifier SGA_v2.0_scaffold4T01878
  • Gene Type Coding gene
  • Location scaffold4 : 147788-152680 : positive

Gene Family Information

  • ID HOM05D003850
  • #Genes/#Species 180/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Transcription initiation factor IIF alpha subunit family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006367
IEA
InterProtranscription initiation from RNA polymerase II promoter
GO:0032968
IEA
InterPropositive regulation of transcription elongation from RNA polymerase II promoter

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G12610
GO:0008022
ISO
PLAZA Integrative Orthologyprotein C-terminus binding AT4G12610

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036390 Winged helix DNA-binding domain superfamily
IPR008851 Transcription initiation factor IIF, alpha subunit
IPR011039 Transcription Factor IIF, Rap30/Rap74, interaction
IPR036388 Winged helix-like DNA-binding domain superfamily
Mapman id Description
15.3.3.4.1 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIf basal transcription factor heterodimer.subunit alpha