Gene: Zm00001eb398520

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb398520
  • Transcript Identifier Zm00001eb398520_T001
  • Gene Type Coding gene
  • Location 9 : 148417255-148422514 : positive

Gene Family Information

  • ID HOM05D003850
  • #Genes/#Species 180/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb398520_T001
  • pid Zm00001eb398520_P001
  • uniprot A0A3L6DFF7
  • uniprot A0A1D6PER1
  • entrez 103639350
  • refseq XP_008660335.1
  • refseq XM_008662113.1
  • V4_identifier Zm00001d047909

Descriptions

  • Description Zm00001e038567
  • Description transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006367
IBA
IEA
GOA Databasetranscription initiation from RNA polymerase II promoter
GO:0006367
IEA
InterProtranscription initiation from RNA polymerase II promoter
GO:0032968
IEA
GOA Databasepositive regulation of transcription elongation from RNA polymerase II promoter
GO:0032968
IEA
InterPropositive regulation of transcription elongation from RNA polymerase II promoter
GO:0006413
IEA
GOA Databasetranslational initiation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0001096
IBA
GOA DatabaseTFIIF-class transcription factor complex binding
GO:0016251
IBA
GOA DatabaseRNA polymerase II general transcription initiation factor activity
GO:0003743
IEA
GOA Databasetranslation initiation factor activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G12610
GO:0008022
ISO
PLAZA Integrative Orthologyprotein C-terminus binding AT4G12610

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus
GO:0005674
IBA
GOA Databasetranscription factor TFIIF complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR011039 Transcription Factor IIF, Rap30/Rap74, interaction
IPR008851 Transcription initiation factor IIF, alpha subunit
IPR036390 Winged helix DNA-binding domain superfamily
Mapman id Description
15.3.3.4.1 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIf basal transcription factor heterodimer.subunit alpha