Gene: Solyc11g012150.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc11g012150.3
- Transcript Identifier Solyc11g012150.3.1
- Gene Type Coding gene
- Location SL4.0ch11 : 5137866-5144925 : negative
Gene Family Information
- ID HOM05D003850
- #Genes/#Species 180/94
- Phylogenetic origin
- ID ORTHO05D004515
- #Genes/#Species 178/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc11g012150.3.1
- uniprot A0A3Q7JJK5
- gene_id Solyc11g012150
Descriptions
- Description Transcription initiation factor IIF subunit alpha (AHRD V3.3 *** A0A2G2VDD5_CAPBA)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006367 | IBA IEA | GOA Database | transcription initiation from RNA polymerase II promoter | |
GO:0006367 | IEA | InterPro | transcription initiation from RNA polymerase II promoter | |
GO:0032968 | IEA | GOA Database | positive regulation of transcription elongation from RNA polymerase II promoter | |
GO:0032968 | IEA | InterPro | positive regulation of transcription elongation from RNA polymerase II promoter |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003677 | IEA | GOA Database | DNA binding | |
GO:0003677 | IEA | InterPro | DNA binding | |
GO:0001096 | IBA | GOA Database | TFIIF-class transcription factor complex binding | |
GO:0016251 | IBA | GOA Database | RNA polymerase II general transcription initiation factor activity | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G12610 |
GO:0008022 | ISO | PLAZA Integrative Orthology | protein C-terminus binding | AT4G12610 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IEA | GOA Database | nucleus | |
GO:0005634 | IEA | InterPro | nucleus | |
GO:0005674 | IBA | GOA Database | transcription factor TFIIF complex |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.3.3.4.1 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIf basal transcription factor heterodimer.subunit alpha |