Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02511 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 4.4e-61 238.4 188 100.0
vmacro17192 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 5.9e-50 201.4 184 60.9
Rhsim13G0017700 Rhododendron simsii HOM05D003686 ORTHO05D004322 1.7e-49 199.9 201 56.7
Actinidia00703 Actinidia chinensis HOM05D003686 ORTHO05D004322 1.1e-38 164.1 187 62.6
Dinv11293 Davidia involucrata HOM05D003686 ORTHO05D004322 4.6e-34 148.7 185 61.6
Dinv11297 Davidia involucrata HOM05D003686 ORTHO05D004322 1.3e-33 147.1 185 61.1
CSS0007511 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 3.0e-33 146.0 88 83.0
CSS0037271 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 3.0e-33 146.0 88 83.0
Manes.01G213100 Manihot esculenta HOM05D003686 ORTHO05D004322 1.9e-32 143.3 196 53.6
Potri.003G058400 Populus trichocarpa HOM05D003686 ORTHO05D004322 7.3e-32 141.4 189 52.4
Manes.05G068800 Manihot esculenta HOM05D003686 ORTHO05D004322 1.2e-31 140.6 190 60.5
Atru.chr5.1287 Acer truncatum HOM05D003686 ORTHO05D004322 6.2e-31 138.3 192 56.2
Eucgr.A00286 Eucalyptus grandis HOM05D003686 ORTHO05D004322 1.1e-30 137.5 191 48.2
QL93p0358_0011 Quercus lobata HOM05D003686 ORTHO05D004322 1.1e-30 137.5 190 53.2
QL07p015848 Quercus lobata HOM05D003686 ORTHO05D004322 2.4e-30 136.3 190 46.3
Glyma.02G152300 Glycine max HOM05D003686 ORTHO05D004322 6.8e-30 134.8 190 53.7
Duzib133G0241 Durio zibethinus HOM05D003686 ORTHO05D004322 1.2e-29 134.0 192 56.8
VMungo0720G0802 Vigna mungo HOM05D003686 ORTHO05D004322 1.5e-29 133.7 191 51.8
Phvul.007G166600 Phaseolus vulgaris HOM05D003686 ORTHO05D004322 3.4e-29 132.5 190 57.9
Eucgr.B02749 Eucalyptus grandis HOM05D003686 ORTHO05D004322 4.4e-29 132.1 189 64.6
Lsat_1_v5_gn_5_188760 Lactuca sativa HOM05D003686 ORTHO05D004322 4.4e-29 132.1 88 76.1
Ciclev10022350m.g Citrus clementina HOM05D003686 ORTHO05D004322 7.6e-29 131.3 190 60.0
Duzib138G0197 Durio zibethinus HOM05D003686 ORTHO05D004322 7.6e-29 131.3 191 63.4
Glyma.10G021900 Glycine max HOM05D003686 ORTHO05D004322 7.6e-29 131.3 190 43.2
TAR365G0683 Trochodendron aralioides HOM05D003686 ORTHO05D004322 7.6e-29 131.3 97 71.1
GSVIVG01011011001 Vitis vinifera HOM05D003686 ORTHO05D004322 1.3e-28 130.6 97 72.2
QL04p005272 Quercus lobata HOM05D003686 ORTHO05D004322 2.2e-28 129.8 190 44.7
TAR636G2878 Trochodendron aralioides HOM05D003686 ORTHO05D004322 2.2e-28 129.8 188 44.7
Lj1g0025208 Lotus japonicus HOM05D003686 ORTHO05D004322 2.9e-28 129.4 190 43.2
Sabra03G0032800 Salix brachista HOM05D003686 ORTHO05D004322 3.8e-28 129.0 189 46.6
Gohir.A11G118400 Gossypium hirsutum HOM05D003686 ORTHO05D004322 8.4e-28 127.9 192 60.4
DCAR_007018 Daucus carota HOM05D003686 ORTHO05D004322 1.4e-27 127.1 88 71.6
Gorai.007G132200 Gossypium raimondii HOM05D003686 ORTHO05D004322 1.4e-27 127.1 192 59.9
RcHm_v2.0_Chr6g0292481 Rosa chinensis HOM05D003686 ORTHO05D004322 1.9e-27 126.7 190 49.5
Thecc.10G102800 Theobroma cacao HOM05D003686 ORTHO05D004322 1.9e-27 126.7 92 70.7
TAR362G1277 Trochodendron aralioides HOM05D003686 ORTHO05D004322 3.2e-27 125.9 188 44.1
CiPaw.07G099200 Carya illinoinensis HOM05D003686 ORTHO05D004322 5.4e-27 125.2 190 49.5
DCAR_012430 Daucus carota HOM05D003686 ORTHO05D004322 9.2e-27 124.4 89 70.8
COL.COLO4_08036 Corchorus olitorius HOM05D003686 ORTHO05D004322 1.2e-26 124.0 192 52.1
Haze_04804 Corylus avellana HOM05D003686 ORTHO05D004322 1.2e-26 124.0 191 45.0
Lalb_Chr06g0163281 Lupinus albus HOM05D003686 ORTHO05D004322 1.2e-26 124.0 192 47.9
FAN20G1534 Fragaria x ananassa HOM05D003686 ORTHO05D004322 2.1e-26 123.2 188 49.5
arahy.Tifrunner.gnm1.ann1.MV1AMG Arachis hypogaea HOM05D003686 ORTHO05D004322 2.7e-26 122.9 189 56.1
CiPaw.08G100800 Carya illinoinensis HOM05D003686 ORTHO05D004322 2.7e-26 122.9 188 61.7
Gohir.D11G123300 Gossypium hirsutum HOM05D003686 ORTHO05D004322 2.7e-26 122.9 191 45.0
Nn1g08910 Nelumbo nucifera HOM05D003686 ORTHO05D004322 3.5e-26 122.5 173 47.4
Cpa.g.sc9.157 Carica papaya HOM05D003686 ORTHO05D004322 4.6e-26 122.1 92 72.8
ECA248G2178 Erigeron canadensis HOM05D003686 ORTHO05D004322 4.6e-26 122.1 88 71.6
Aqoxy2G03146 Aquilegia oxysepala HOM05D003686 ORTHO05D004322 6.0e-26 121.7 92 70.7
arahy.Tifrunner.gnm1.ann1.TAZ1K7 Arachis hypogaea HOM05D003686 ORTHO05D004322 6.0e-26 121.7 191 55.5
FAN20G0133 Fragaria x ananassa HOM05D003686 ORTHO05D004322 6.0e-26 121.7 187 49.2
FAN27G0391 Fragaria x ananassa HOM05D003686 ORTHO05D004322 6.0e-26 121.7 187 49.2
ClCG09G006530 Citrullus lanatus HOM05D003686 ORTHO05D004322 7.8e-26 121.3 82 76.8
HanXRQChr01g0002781 Helianthus annuus HOM05D003686 ORTHO05D004322 1.0e-25 120.9 68 85.3
CDE11G0890 Ceratophyllum demersum HOM05D003686 ORTHO05D004322 2.3e-25 119.8 95 64.2
CsaV3_7G028310 Cucumis sativus L. HOM05D003686 ORTHO05D004322 2.3e-25 119.8 82 75.6
TWI14G0352 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 2.3e-25 119.8 92 71.7
FAN24G2968 Fragaria x ananassa HOM05D003686 ORTHO05D004322 3.0e-25 119.4 188 46.3
Lj3A810T51 Lonicera japonica HOM05D003686 ORTHO05D004322 3.0e-25 119.4 96 64.6
PGR031G1643 Punica granatum HOM05D003686 ORTHO05D004322 3.0e-25 119.4 90 72.2
Nn2g12370 Nelumbo nucifera HOM05D003686 ORTHO05D004322 3.9e-25 119.0 181 44.8
ECA247G2101 Erigeron canadensis HOM05D003686 ORTHO05D004322 5.1e-25 118.6 84 72.6
Sed0010038 Sechium edule HOM05D003686 ORTHO05D004322 5.1e-25 118.6 79 77.2
MELO3C015891.2 Cucumis melo HOM05D003686 ORTHO05D004322 6.6e-25 118.2 82 74.4
FvH4_2g24650 Fragaria vesca HOM05D003686 ORTHO05D004322 8.6e-25 117.9 187 48.7
Gorai.004G053600 Gossypium raimondii HOM05D003686 ORTHO05D004322 8.6e-25 117.9 190 45.8
HPP92_021461 Vanilla planifolia HOM05D003686 ORTHO05D004322 1.1e-24 117.5 91 69.2
Sed0008045 Sechium edule HOM05D003686 ORTHO05D004322 1.5e-24 117.1 79 75.9
CANSAT78G2257 Cannabis sativa HOM05D003686 ORTHO05D004322 1.9e-24 116.7 89 71.9
Lj2P1184T34 Lonicera japonica HOM05D003686 ORTHO05D004322 1.9e-24 116.7 89 69.7
FAN15G3346 Fragaria x ananassa HOM05D003686 ORTHO05D004322 2.5e-24 116.3 190 48.4
Cfa010467 Carpinus fangiana HOM05D003686 ORTHO05D004322 3.3e-24 115.9 92 70.7
Nitab4.5_0001149g0030 Nicotiana tabacum HOM05D003686 ORTHO05D004322 3.3e-24 115.9 94 64.9
Nitab4.5_0001624g0040 Nicotiana tabacum HOM05D003686 ORTHO05D004322 3.3e-24 115.9 94 64.9
Lalb_Chr02g0143061 Lupinus albus HOM05D003686 ORTHO05D004322 5.6e-24 115.2 192 47.9
Nitab4.5_0000295g0050 Nicotiana tabacum HOM05D003686 ORTHO05D004322 5.6e-24 115.2 186 44.6
Medtr7g107640 Medicago truncatula HOM05D003686 ORTHO05D004322 7.3e-24 114.8 77 74.0
TWI23G0547 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 7.3e-24 114.8 92 69.6
Ca_09109_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 1.6e-23 113.6 77 75.3
Gohir.A08G043900 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.6e-23 113.6 190 44.2
MSTRG.21821 Avicennia marina HOM05D003686 ORTHO05D004322 2.1e-23 113.2 95 63.2
C09p02540 Brassica napus HOM05D003686 ORTHO05D004322 2.8e-23 112.8 75 76.0
Migut.N00130 Erythranthe guttata HOM05D003686 ORTHO05D004322 3.6e-23 112.5 95 62.1
HanXRQChr11g0330151 Helianthus annuus HOM05D003686 ORTHO05D004322 3.6e-23 112.5 69 81.2
Psat3g024960 Pisum sativum HOM05D003686 ORTHO05D004322 4.7e-23 112.1 77 72.7
Ca_10377_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 6.2e-23 111.7 198 41.4
Ca_29655_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 6.2e-23 111.7 198 41.4
Lj5g0005016 Lotus japonicus HOM05D003686 ORTHO05D004322 6.2e-23 111.7 194 47.9
Nitab4.5_0004238g0080 Nicotiana tabacum HOM05D003686 ORTHO05D004322 6.2e-23 111.7 186 43.5
TPR.G15798 Trifolium pratense HOM05D003686 ORTHO05D004322 6.2e-23 111.7 193 52.3
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 8.1e-23 111.3 77 74.0
ATR0706G002 Amborella trichopoda HOM05D003686 ORTHO05D004322 1.1e-22 110.9 90 64.4
Thhalv10028986m.g Eutrema salsugineum HOM05D003686 ORTHO05D004322 1.1e-22 110.9 88 68.2
Sp6g03160 Schrenkiella parvula HOM05D003686 ORTHO05D004322 1.1e-22 110.9 88 68.2
Gohir.D08G053600 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.8e-22 110.2 92 67.4
Hma1.2p1_0643F.1_g194695 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 3.1e-22 109.4 90 66.7
Hma1.2p1_0643F.1_g194700 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 3.1e-22 109.4 90 66.7
Hma1.2p1_0643F.1_g194710 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 3.1e-22 109.4 90 66.7
Hma1.2p1_0643F.1_g194711 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 3.1e-22 109.4 90 66.7
Prupe.8G251800 Prunus persica HOM05D003686 ORTHO05D004322 3.1e-22 109.4 94 66.0
C03p37160 Brassica napus HOM05D003686 ORTHO05D004322 4.0e-22 109.0 89 66.3
Psat6g168000 Pisum sativum HOM05D003686 ORTHO05D004322 4.0e-22 109.0 91 69.2
Medtr1g088990 Medicago truncatula HOM05D003686 ORTHO05D004322 5.2e-22 108.6 90 65.6
BcaB01g02510 Brassica carinata HOM05D003686 ORTHO05D004322 6.9e-22 108.2 71 78.9
BcaC01g06704 Brassica carinata HOM05D003686 ORTHO05D004322 6.9e-22 108.2 71 78.9
A03p30600 Brassica napus HOM05D003686 ORTHO05D004322 6.9e-22 108.2 71 78.9
BolC3t16013H Brassica oleracea HOM05D003686 ORTHO05D004322 6.9e-22 108.2 71 78.9
BraA03t12240Z Brassica rapa HOM05D003686 ORTHO05D004322 6.9e-22 108.2 71 78.9
BcaB01g01979 Brassica carinata HOM05D003686 ORTHO05D004322 9.0e-22 107.8 71 77.5
BolC9t53184H Brassica oleracea HOM05D003686 ORTHO05D004322 9.0e-22 107.8 71 77.5
Os02g0266100 Oryza sativa ssp. japonica HOM05D003686 ORTHO05D004322 1.2e-21 107.5 96 67.7
Solyc01g067830.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 1.2e-21 107.5 80 67.5
PGSC0003DMG400022854 Solanum tuberosum HOM05D003686 ORTHO05D004322 1.2e-21 107.5 80 67.5
THA.LOC104826011 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 1.2e-21 107.5 72 77.8
CAN.G185.6 Capsicum annuum HOM05D003686 ORTHO05D004322 1.5e-21 107.1 93 61.3
CAN.G1006.23 Capsicum annuum HOM05D003686 ORTHO05D004322 2.0e-21 106.7 88 62.5
BcaB05g23688 Brassica carinata HOM05D003686 ORTHO05D004322 2.6e-21 106.3 88 65.9
BcaB05g23689 Brassica carinata HOM05D003686 ORTHO05D004322 2.6e-21 106.3 88 65.9
A09p02440 Brassica napus HOM05D003686 ORTHO05D004322 2.6e-21 106.3 71 76.1
BraA09t35891Z Brassica rapa HOM05D003686 ORTHO05D004322 2.6e-21 106.3 71 76.1
CARHR251560 Cardamine hirsuta HOM05D003686 ORTHO05D004322 3.4e-21 105.9 77 74.0
Peaxi162Scf00936g00218 Petunia axillaris HOM05D003686 ORTHO05D004322 4.4e-21 105.5 92 62.0
AT4G03120 Arabidopsis thaliana HOM05D003686 ORTHO05D004322 7.6e-21 104.8 75 76.0
Sopen01g029780 Solanum pennellii HOM05D003686 ORTHO05D004322 9.9e-21 104.4 80 66.2
PGSC0003DMG400021997 Solanum tuberosum HOM05D003686 ORTHO05D004322 9.9e-21 104.4 88 62.5
Zm00001eb203990 Zea mays HOM05D003686 ORTHO05D004322 9.9e-21 104.4 96 65.6
Peaxi162Scf01364g00015 Petunia axillaris HOM05D003686 ORTHO05D004322 1.3e-20 104.0 80 63.8
Solyc06g008860.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 1.7e-20 103.6 88 62.5
Sopen06g003610 Solanum pennellii HOM05D003686 ORTHO05D004322 1.7e-20 103.6 88 62.5
THA.LOC104817532 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 1.7e-20 103.6 73 74.0
vmacro14959 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.7e-20 103.6 178 40.4
Carub.0006s3393 Capsella rubella HOM05D003686 ORTHO05D004322 1.4e-19 100.5 70 74.3
BcaC03g16209 Brassica carinata HOM05D003686 ORTHO05D004322 2.4e-19 99.8 71 74.6
BolC2t10013H Brassica oleracea HOM05D003686 ORTHO05D004322 2.4e-19 99.8 71 74.6
Cc01_g20160 Coffea canephora HOM05D003686 ORTHO05D004322 4.2e-19 99.0 202 36.6
Oeu022800.1 Olea europaea HOM05D003686 ORTHO05D004322 5.4e-19 98.6 78 70.5
Oeu022802.1 Olea europaea HOM05D003686 ORTHO05D004322 5.4e-19 98.6 78 70.5
MD03G1275200 Malus domestica HOM05D003686 ORTHO05D004322 7.1e-19 98.2 99 58.6
Mapoly0103s0046 Marchantia polymorpha HOM05D003686 ORTHO05D004322 7.1e-19 98.2 95 62.1
PSO801G0146 Papaver somniferum HOM05D003686 ORTHO05D004322 1.2e-18 97.4 91 59.3
A02p25120 Brassica napus HOM05D003686 ORTHO05D004322 2.1e-18 96.7 73 71.2
MSTRG.12592 Avicennia marina HOM05D003686 ORTHO05D004322 2.7e-18 96.3 68 70.6
Sc25g0004660 Simmondsia chinensis HOM05D003686 ORTHO05D004322 4.6e-18 95.5 82 65.9
MD11G1297300 Malus domestica HOM05D003686 ORTHO05D004322 7.8e-18 94.7 78 66.7
Ah.12g061550 Amaranthus hybridus HOM05D003686 ORTHO05D004322 2.3e-17 93.2 75 70.7
AUR62025901 Chenopodium quinoa HOM05D003686 ORTHO05D004322 2.3e-17 93.2 76 69.7
AUR62025902 Chenopodium quinoa HOM05D003686 ORTHO05D004322 2.3e-17 93.2 76 69.7
Hund24902 Selenicereus undatus HOM05D003686 ORTHO05D004322 2.3e-17 93.2 102 54.9
BraA02t07500Z Brassica rapa HOM05D003686 ORTHO05D004322 3.0e-17 92.8 71 70.4
PSO339G4974 Papaver somniferum HOM05D003686 ORTHO05D004322 3.0e-17 92.8 77 63.6
COL.COLO4_34092 Corchorus olitorius HOM05D003686 ORTHO05D004322 3.9e-17 92.4 91 60.4
Duzib211G0369 Durio zibethinus HOM05D003686 ORTHO05D004322 3.9e-17 92.4 79 63.3
vmacro14957 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 5.1e-17 92.0 181 45.3
Pp3c4_170 Physcomitrium patens HOM05D003686 ORTHO05D004322 8.7e-17 91.3 101 56.4
Pp3c12_26180 Physcomitrium patens HOM05D003686 ORTHO05D004322 1.9e-16 90.1 101 56.4
AUR62029649 Chenopodium quinoa HOM05D003686 ORTHO05D004322 2.5e-16 89.7 76 68.4
unitig_61.g26148 Utricularia gibba HOM05D003686 ORTHO05D004322 1.3e-15 87.4 88 56.8
Peaxi162Scf01067g00002 Petunia axillaris HOM05D003686 ORTHO05D004322 1.6e-15 87.0 80 57.5
SGA_v2.0_scaffold172G39059 Striga asiatica HOM05D003686 ORTHO05D004322 2.1e-15 86.7 99 52.5
SGA_v2.0_scaffold36G14363 Striga asiatica HOM05D003686 ORTHO05D004322 2.1e-15 86.7 81 59.3
Migut.N02118 Erythranthe guttata HOM05D003686 ORTHO05D004322 2.8e-15 86.3 79 60.8
Migut.O00643 Erythranthe guttata HOM05D003686 ORTHO05D004322 2.8e-15 86.3 79 60.8
SalBow6G6913 Salvia bowleyana HOM05D003686 ORTHO05D004322 3.6e-15 85.9 84 61.9
SalBow8G5349 Salvia bowleyana HOM05D003686 ORTHO05D004322 3.6e-15 85.9 84 61.9
EL10Ac2g03326 Beta vulgaris HOM05D003686 ORTHO05D004322 6.2e-15 85.1 59 74.6
AagrBONN_evm.TU.Sc2ySwM_228.930 Anthoceros agrestis HOM05D003686 ORTHO05D004322 1.8e-14 83.6 72 63.9
Mapoly0087s0074 Marchantia polymorpha HOM05D003686 ORTHO05D004322 3.1e-14 82.8 90 57.8
SGA_v2.0_scaffold89G27564 Striga asiatica HOM05D003686 ORTHO05D004322 2.0e-13 80.1 83 56.6
CSS0048633 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 1.7e-12 77.0 98 50.0
Psat3g182400 Pisum sativum HOM05D003686 ORTHO05D004322 9.3e-11 71.2 45 75.6
Psat0s3642g0040 Pisum sativum HOM05D000068 ORTHO05D025728 1.2e-10 70.9 45 77.8
unitig_22.g6331 Utricularia gibba HOM05D003686 ORTHO05D004322 1.2e-10 70.9 79 54.4
HPP92_021468 Vanilla planifolia HOM05D003686 ORTHO05D004322 2.7e-10 69.7 41 85.4
QL07p015856 Quercus lobata HOM05D003686 ORTHO05D004322 1.0e-09 67.8 57 61.4
QL93p0358_0018 Quercus lobata HOM05D003686 ORTHO05D004322 5.1e-09 65.5 57 59.6
PSO384G1563 Papaver somniferum HOM05D003686 ORTHO05D004322 1.4e-06 57.4 77 50.6
PSO384G1591 Papaver somniferum HOM05D000185 ORTHO05D000105 1.4e-06 57.4 77 50.6
PSO384G1636 Papaver somniferum HOM05D000185 ORTHO05D000105 1.4e-06 57.4 77 50.6
PSO384G1681 Papaver somniferum HOM05D003686 ORTHO05D004322 1.4e-06 57.4 77 50.6


User provided reference genes

Program Settings