Gene: Psat0s3642g0040
General Information
Structural Information
- Species Pisum sativum
- Gene Identifier Psat0s3642g0040
- Transcript Identifier Psat0s3642g0040.1
- Gene Type Coding gene
- Location scaffold03642 : 28813-30170 : negative
Gene Family Information
- ID HOM05D000068
- #Genes/#Species 3957/100
- Phylogenetic origin
- ID ORTHO05D025728
- #Genes/#Species 5/2
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Psat0s3642g0040.1
Descriptions
- Description ABC transporter
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0055085 | ISO | PLAZA Homology (enrichment) | transmembrane transport | HOM05D000068 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0140359 | ISO | PLAZA Homology (enrichment) | ABC-type transporter activity | HOM05D000068 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | ISO | PLAZA Homology (enrichment) | integral component of membrane | HOM05D000068 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR039421 | Type 1 protein exporter |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR003593 | AAA+ ATPase domain |
| IPR013085 | U1-C, C2H2-type zinc finger |
| IPR036236 | Zinc finger C2H2 superfamily |
| IPR003439 | ABC transporter-like, ATP-binding domain |
| IPR003604 | Matrin/U1-C-like, C2H2-type zinc finger |
| Mapman id | Description |
|---|---|
| 16.2.1.1.3 | RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).protein factor (U1C) |