Gene: Carub.0006s3393

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0006s3393
  • Transcript Identifier Carub.0006s3393.1
  • Gene Type Coding gene
  • Location scaffold_6 : 15297250-15298758 : negative

Gene Family Information

  • ID HOM05D003686
  • #Genes/#Species 186/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0006s3393.v1.1
  • pacid 39249239
  • synonym Carubv10002027m.g

Descriptions

  • Description K11095 - U1 small nuclear ribonucleoprotein C (SNRPC)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000387
IEA
InterProspliceosomal snRNP assembly
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005685
IEA
InterProU1 snRNP

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013085 U1-C, C2H2-type zinc finger
IPR017340 U1 small nuclear ribonucleoprotein C
IPR036236 Zinc finger C2H2 superfamily
IPR003604 Matrin/U1-C-like, C2H2-type zinc finger
Mapman id Description
16.2.1.1.3 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).protein factor (U1C)