Gene: TPR.G18851

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G18851
  • Transcript Identifier TPR.T19507
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_scaf_307 : 193028-204793 : positive

Gene Family Information

  • ID HOM05D004763
  • #Genes/#Species 154/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA19507.v2
  • id Tp57577_TGAC_v2_gene18851.v2
  • pacid 35954280
  • uniprot A0A2K3P4Z9

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010026
ISO
PLAZA Integrative Orthologytrichome differentiation AT3G20780
GO:0009741
ISO
PLAZA Integrative Orthologyresponse to brassinosteroid AT3G20780
GO:0007389
ISO
PLAZA Integrative Orthologypattern specification process AT3G20780
GO:0042023
ISO
PLAZA Integrative OrthologyDNA endoreduplication AT3G20780
GO:0000902
ISO
PLAZA Integrative Orthologycell morphogenesis AT3G20780
GO:0006265
IEA
GOA DatabaseDNA topological change
GO:0006265
IEA
InterProDNA topological change

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G20780
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT3G20780
GO:0042803
IEA
GOA Databaseprotein homodimerization activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003918
IEA
GOA DatabaseDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0003918
IEA
InterProDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0016853
IEA
GOA Databaseisomerase activity
GO:0003916
IEA
GOA DatabaseDNA topoisomerase activity
GO:0008270
IEA
InterProzinc ion binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036236 Zinc finger C2H2 superfamily
IPR015320 DNA topoisomerase VI, subunit B, transducer
IPR005734 DNA topoisomerase VI, subunit B
IPR036890 Histidine kinase/HSP90-like ATPase superfamily
IPR003604 Matrin/U1-C-like, C2H2-type zinc finger
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
IPR020568 Ribosomal protein S5 domain 2-type fold
IPR013085 U1-C, C2H2-type zinc finger
Mapman id Description
13.2.6.1.2 Cell cycle organisation.DNA replication.endoreduplication.somatic DNA topoisomerase VI complex.subunit TOP6B
16.2.1.1.3 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).protein factor (U1C)