Gene: TPR.G15798

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G15798
  • Transcript Identifier TPR.T16335
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG4 : 1714450-1716721 : positive

Gene Family Information

  • ID HOM05D003686
  • #Genes/#Species 186/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA16335.v2
  • id Tp57577_TGAC_v2_gene15798.v2
  • pacid 35963315

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000387
IEA
InterProspliceosomal snRNP assembly
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
InterProzinc ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005685
IEA
InterProU1 snRNP

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017340 U1 small nuclear ribonucleoprotein C
IPR003604 Matrin/U1-C-like, C2H2-type zinc finger
IPR013085 U1-C, C2H2-type zinc finger
IPR036236 Zinc finger C2H2 superfamily
Mapman id Description
16.2.1.1.3 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).protein factor (U1C)