Gene: Duzib133G0241

General Information

Structural Information

  • Species Durio zibethinus
  • Gene Identifier Duzib133G0241
  • Transcript Identifier Duzib133G0241.01
  • Gene Type Coding gene
  • Location NW_019167938.1 : 4842380-4843670 : negative

Gene Family Information

  • ID HOM05D003686
  • #Genes/#Species 186/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name LOC111314183
  • name XM_022915306.1
  • pid XP_022771041.1
  • id gene-LOC111314183
  • uniprot A0A6P6B260

Descriptions

  • product U1 small nuclear ribonucleoprotein C
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0000395
IEA
GOA DatabasemRNA 5'-splice site recognition
GO:0000387
IEA
GOA Databasespliceosomal snRNP assembly
GO:0000387
IEA
InterProspliceosomal snRNP assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0030619
IEA
GOA DatabaseU1 snRNA binding
GO:0003729
IEA
GOA DatabasemRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0000243
IEA
GOA Databasecommitment complex
GO:0005685
IEA
GOA DatabaseU1 snRNP
GO:0005685
IEA
InterProU1 snRNP
GO:0071004
IEA
GOA DatabaseU2-type prespliceosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017340 U1 small nuclear ribonucleoprotein C
IPR036236 Zinc finger C2H2 superfamily
IPR013085 U1-C, C2H2-type zinc finger
IPR003604 Matrin/U1-C-like, C2H2-type zinc finger
Mapman id Description
16.2.1.1.3 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).protein factor (U1C)