Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7103 Utricularia gibba HOM05D003850 ORTHO05D004515 4.4e-263 911.0 548 100.0
Migut.M01390 Erythranthe guttata HOM05D003850 ORTHO05D004515 6.1e-172 608.2 532 71.2
MSTRG.7170 Avicennia marina HOM05D003850 ORTHO05D004515 3.0e-166 589.3 533 69.6
SGA_v2.0_scaffold4G01878 Striga asiatica HOM05D003850 ORTHO05D004515 2.2e-161 573.2 535 70.3
Nitab4.5_0001198g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 3.2e-160 569.3 534 68.7
Sopen11g006940 Solanum pennellii HOM05D003850 ORTHO05D004515 1.0e-158 564.3 534 68.0
CANSAT56G0590 Cannabis sativa HOM05D003850 ORTHO05D004515 1.4e-155 553.9 537 64.8
CSS0032808 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 1.2e-154 550.8 537 63.5
SalBow8G5272 Salvia bowleyana HOM05D003850 ORTHO05D004515 7.6e-154 548.1 546 65.4
Oeu002760.2 Olea europaea HOM05D003850 ORTHO05D004515 3.2e-152 542.7 568 64.8
CSS0007684 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 3.5e-151 539.3 538 63.4
QL05p069776 Quercus lobata HOM05D003850 ORTHO05D004515 3.5e-151 539.3 537 62.6
arahy.Tifrunner.gnm1.ann1.C17RPB Arachis hypogaea HOM05D003850 ORTHO05D004515 7.8e-151 538.1 536 62.1
Aqoxy1G04110 Aquilegia oxysepala HOM05D003850 ORTHO05D004515 2.3e-150 536.6 542 60.3
Cc09_g00920 Coffea canephora HOM05D003850 ORTHO05D004515 4.3e-149 532.3 535 65.8
Nitab4.5_0000143g0310 Nicotiana tabacum HOM05D003850 ORTHO05D004515 6.2e-148 528.5 534 65.9
arahy.Tifrunner.gnm1.ann1.IIR6TV Arachis hypogaea HOM05D003850 ORTHO05D004515 1.1e-147 527.7 536 62.1
Nn1g03331 Nelumbo nucifera HOM05D003850 ORTHO05D004515 1.1e-147 527.7 542 62.5
Sed0003006 Sechium edule HOM05D003850 ORTHO05D004515 1.1e-147 527.7 541 64.3
TAR624G0821 Trochodendron aralioides HOM05D003850 ORTHO05D004515 1.5e-146 523.9 542 62.7
Duzib160G0220 Durio zibethinus HOM05D003850 ORTHO05D004515 2.9e-145 519.6 550 62.7
Ca_00718_v3 Cicer arietinum L. HOM05D003850 ORTHO05D004515 2.3e-142 510.0 537 59.0
CsaV3_3G028740 Cucumis sativus L. HOM05D003850 ORTHO05D004515 5.1e-142 508.8 538 63.6
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 3.3e-141 506.1 537 61.8
Ciclev10014841m.g Citrus clementina HOM05D003850 ORTHO05D004515 9.6e-141 504.6 539 60.3
THA.LOC104812992 Tarenaya hassleriana HOM05D003850 ORTHO05D004515 1.3e-140 504.2 541 58.6
Thecc.06G232700 Theobroma cacao HOM05D003850 ORTHO05D004515 1.6e-140 503.8 546 61.5
PGSC0003DMG400013344 Solanum tuberosum HOM05D003850 ORTHO05D004515 2.8e-140 503.1 497 67.4
Glyma.09G009900 Glycine max HOM05D003850 ORTHO05D004515 1.8e-139 500.4 546 60.6
Phvul.006G143600 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 1.8e-139 500.4 538 59.9
ClCG07G001740 Citrullus lanatus HOM05D003850 ORTHO05D004515 5.3e-139 498.8 538 62.3
Solyc11g012150.3 Solanum lycopersicum HOM05D003850 ORTHO05D004515 6.9e-139 498.4 497 66.6
Atru.chr1.2461 Acer truncatum HOM05D003850 ORTHO05D004515 1.2e-138 497.7 540 59.4
Potri.006G009100 Populus trichocarpa HOM05D003850 ORTHO05D004515 2.0e-138 496.9 537 60.5
CiPaw.09G102000 Carya illinoinensis HOM05D003850 ORTHO05D004515 3.4e-138 496.1 570 56.0
Manes.07G088900 Manihot esculenta HOM05D003850 ORTHO05D004515 7.6e-138 495.0 535 64.7
Actinidia39269 Actinidia chinensis HOM05D003850 ORTHO05D004515 9.9e-138 494.6 381 71.9
Prupe.4G011300 Prunus persica HOM05D003850 ORTHO05D004515 2.2e-137 493.4 537 62.6
RhsimUnG0025700 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.9e-136 490.3 586 54.3
RhsimUnG0028500 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.9e-136 490.3 586 54.3
GSVIVG01003352001 Vitis vinifera HOM05D003850 ORTHO05D004515 4.2e-136 489.2 543 61.7
CAN.G1186.28 Capsicum annuum HOM05D003850 ORTHO05D004515 5.4e-136 488.8 534 63.3
VMungo0540G1287 Vigna mungo HOM05D003850 ORTHO05D004515 1.6e-135 487.3 538 59.1
TAR629G2665 Trochodendron aralioides HOM05D003850 ORTHO05D004515 3.5e-135 486.1 537 58.1
PSO210G4264 Papaver somniferum HOM05D003850 ORTHO05D004515 5.1e-134 482.3 538 59.9
VMungo1215G3075 Vigna mungo HOM05D003850 ORTHO05D004515 6.6e-134 481.9 538 59.9
arahy.Tifrunner.gnm1.ann1.97WSNQ Arachis hypogaea HOM05D003850 ORTHO05D004515 8.7e-134 481.5 548 61.7
Lalb_Chr20g0119201 Lupinus albus HOM05D003850 ORTHO05D004515 5.6e-133 478.8 539 57.9
Phvul.003G083500 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 9.6e-133 478.0 539 61.4
ECA233G3046 Erigeron canadensis HOM05D003850 ORTHO05D004515 1.4e-131 474.2 543 61.0
arahy.Tifrunner.gnm1.ann1.0C9QHL Arachis hypogaea HOM05D003850 ORTHO05D004515 2.6e-130 469.9 554 59.4
Lj2A262G45 Lonicera japonica HOM05D003850 ORTHO05D004515 9.9e-130 468.0 537 57.5
Oeu044421.3 Olea europaea HOM05D003850 ORTHO05D004515 1.3e-129 467.6 829 44.8
ATR0751G086 Amborella trichopoda HOM05D003850 ORTHO05D004515 1.7e-129 467.2 546 56.4
Medtr2g025590 Medicago truncatula HOM05D003850 ORTHO05D004515 8.4e-129 464.9 534 60.1
Peaxi162Scf00558g00516 Petunia axillaris HOM05D003850 ORTHO05D004515 9.3e-128 461.5 462 65.6
Gorai.010G186300 Gossypium raimondii HOM05D003850 ORTHO05D004515 2.7e-127 459.9 546 61.2
Eucgr.E03951 Eucalyptus grandis HOM05D003850 ORTHO05D004515 6.0e-127 458.8 543 55.1
HPP92_001629 Vanilla planifolia HOM05D003850 ORTHO05D004515 2.3e-126 456.8 538 55.6
Glyma.15G114200 Glycine max HOM05D003850 ORTHO05D004515 3.0e-126 456.4 536 56.0
vmacro03646 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 6.7e-126 455.3 545 53.0
Gohir.A06G153120 Gossypium hirsutum HOM05D003850 ORTHO05D004515 1.1e-125 454.5 546 60.6
TWI63G0294 Tripterygium wilfordii HOM05D003850 ORTHO05D004515 1.1e-125 454.5 537 60.7
Potri.016G015100 Populus trichocarpa HOM05D003850 ORTHO05D004515 9.6e-125 451.4 536 56.3
Gohir.D06G159600 Gossypium hirsutum HOM05D003850 ORTHO05D004515 1.3e-124 451.1 546 60.6
AL6G47570 Arabidopsis lyrata HOM05D003850 ORTHO05D004515 1.6e-124 450.7 541 59.7
FvH4_3g01042 Fragaria vesca HOM05D003850 ORTHO05D004515 3.7e-124 449.5 554 58.3
TPR.G3343 Trifolium pratense HOM05D003850 ORTHO05D004515 3.7e-124 449.5 561 54.9
Haze_08659 Corylus avellana HOM05D003850 ORTHO05D004515 1.1e-123 448.0 543 57.3
MBI16_g42266_MAGBIO Magnolia biondii HOM05D003850 ORTHO05D004515 1.1e-123 448.0 570 53.7
Aa31LG9G10040 Aethionema arabicum HOM05D003850 ORTHO05D004515 1.8e-123 447.2 554 57.0
vmacro15772 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 3.1e-123 446.4 549 57.2
CiPaw.10G077600 Carya illinoinensis HOM05D003850 ORTHO05D004515 1.7e-121 440.7 456 59.4
RhsimUnG0109100 Rhododendron simsii HOM05D003850 ORTHO05D004515 2.9e-121 439.9 548 57.3
PSO302G0165 Papaver somniferum HOM05D003850 ORTHO05D004515 3.8e-121 439.5 537 56.2
Cfa000110 Carpinus fangiana HOM05D003850 ORTHO05D004515 6.5e-121 438.7 538 57.8
PGR102G0753 Punica granatum HOM05D003850 ORTHO05D004515 8.4e-121 438.3 540 55.0
MD05G1357300 Malus domestica HOM05D003850 ORTHO05D004515 1.4e-120 437.6 548 56.4
Cpa.g.sc75.120 Carica papaya HOM05D003850 ORTHO05D004515 2.5e-120 436.8 518 60.0
HanXRQChr15g0470091 Helianthus annuus HOM05D003850 ORTHO05D004515 4.2e-120 436.0 521 60.5
AUR62021872 Chenopodium quinoa HOM05D003850 ORTHO05D004515 9.3e-120 434.9 544 53.9
AT4G12610 Arabidopsis thaliana HOM05D003850 ORTHO05D004515 3.0e-118 429.9 544 57.4
FAN25G3770 Fragaria x ananassa HOM05D003850 ORTHO05D004515 5.1e-118 429.1 579 52.3
Sabra06G0006900 Salix brachista HOM05D003850 ORTHO05D004515 6.7e-118 428.7 539 53.4
SEGI_18521 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 1.9e-117 427.2 546 52.4
COL.COLO4_31876 Corchorus olitorius HOM05D003850 ORTHO05D004515 4.3e-117 426.0 545 52.3
Sabra16G0017100 Salix brachista HOM05D003850 ORTHO05D004515 1.3e-116 424.5 543 55.1
FAN21G1422 Fragaria x ananassa HOM05D003850 ORTHO05D004515 4.8e-116 422.5 572 55.6
Carub.0006s3188 Capsella rubella HOM05D003850 ORTHO05D004515 6.9e-115 418.7 543 57.6
SHI24464 Sapria himalayana HOM05D003850 ORTHO05D004515 1.2e-114 417.9 536 51.9
Rhsim13G0146600 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.0e-113 414.8 602 52.2
RcHm_v2.0_Chr5g0001581 Rosa chinensis HOM05D003850 ORTHO05D004515 8.4e-113 411.8 554 55.4
Lj4g0025543 Lotus japonicus HOM05D003850 ORTHO05D004515 1.9e-112 410.6 539 55.1
Sabra16G0000900 Salix brachista HOM05D003850 ORTHO05D004515 4.6e-111 406.0 535 49.5
CARHR253560 Cardamine hirsuta HOM05D003850 ORTHO05D004515 6.1e-111 405.6 539 57.7
BcaC01g04577 Brassica carinata HOM05D003850 ORTHO05D004515 1.8e-110 404.1 541 56.6
BolC3t15918H Brassica oleracea HOM05D003850 ORTHO05D004515 1.8e-110 404.1 541 56.6
C03p36090 Brassica napus HOM05D003850 ORTHO05D004515 2.3e-110 403.7 539 56.4
PSO339G3925 Papaver somniferum HOM05D003850 ORTHO05D004515 3.0e-110 403.3 540 55.9
Lj6g0013016 Lotus japonicus HOM05D003850 ORTHO05D004515 5.1e-110 402.5 541 57.5
BraA03t12173Z Brassica rapa HOM05D003850 ORTHO05D004515 6.7e-110 402.1 541 56.0
A03p29830 Brassica napus HOM05D003850 ORTHO05D004515 1.9e-109 400.6 539 56.0
BolC9t56221H Brassica oleracea HOM05D003850 ORTHO05D004515 9.7e-109 398.3 542 55.5
BcaB01g01757 Brassica carinata HOM05D003850 ORTHO05D004515 8.2e-108 395.2 531 53.9
MELO3C012788.2 Cucumis melo HOM05D003850 ORTHO05D004515 1.2e-106 391.3 437 64.5
Sp6g04900 Schrenkiella parvula HOM05D003850 ORTHO05D004515 1.3e-105 387.9 538 54.5
MD10G1331000 Malus domestica HOM05D003850 ORTHO05D004515 1.7e-105 387.5 506 57.1
BraA09t38246Z Brassica rapa HOM05D003850 ORTHO05D004515 3.8e-105 386.3 558 51.8
Thhalv10028564m.g Eutrema salsugineum HOM05D003850 ORTHO05D004515 3.8e-105 386.3 537 54.9
Hund23984 Selenicereus undatus HOM05D003850 ORTHO05D004515 1.6e-103 380.9 551 54.8
CDE04G2591 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 3.0e-102 376.7 540 58.5
Lsat_1_v5_gn_7_13561 Lactuca sativa HOM05D003850 ORTHO05D004515 4.3e-101 372.9 511 55.4
BcaB01g02623 Brassica carinata HOM05D003850 ORTHO05D004515 7.4e-101 372.1 547 51.9
A09p26740 Brassica napus HOM05D003850 ORTHO05D004515 2.4e-99 367.1 552 50.5
Zm00001eb224360 Zea mays HOM05D003850 ORTHO05D004515 2.4e-99 367.1 459 58.0
CDE06G1774 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 1.3e-97 361.3 348 61.2
BcaC04g21251 Brassica carinata HOM05D003850 ORTHO05D004515 3.6e-95 353.2 535 52.5
C09p33830 Brassica napus HOM05D003850 ORTHO05D004515 3.6e-95 353.2 535 52.5
Psat1g176560 Pisum sativum HOM05D003850 ORTHO05D004515 2.8e-92 343.6 437 57.4
Lj8A171G42 Lonicera japonica HOM05D003850 ORTHO05D004515 1.4e-91 341.3 535 45.4
EL10Ac8g20176 Beta vulgaris HOM05D003850 ORTHO05D004515 1.2e-90 338.2 548 52.2
RcHm_v2.0_Chr5g0007791 Rosa chinensis HOM05D003850 ORTHO05D004515 1.0e-86 325.1 556 43.0
FAN03G2951 Fragaria x ananassa HOM05D003850 ORTHO05D004515 5.3e-83 312.8 543 43.5
Pp3c3_2280 Physcomitrium patens HOM05D003850 ORTHO05D004515 5.3e-83 312.8 547 42.6
FAN16G3024 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.7e-82 310.5 535 43.7
FvH4_3g04782 Fragaria vesca HOM05D003850 ORTHO05D004515 3.5e-82 310.1 536 43.1
FAN21G1676 Fragaria x ananassa HOM05D003850 ORTHO05D004515 3.5e-82 310.1 543 43.5
FvH4_2g22070 Fragaria vesca HOM05D003850 ORTHO05D004515 1.3e-81 308.1 539 42.3
FAN11G3915 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.7e-81 307.8 537 43.0
Duzib235G1223 Durio zibethinus HOM05D003850 ORTHO05D004515 5.5e-80 302.8 382 61.0
FAN24G0125 Fragaria x ananassa HOM05D003850 ORTHO05D008045 1.8e-78 297.7 539 41.9
Zm00001eb398520 Zea mays HOM05D003850 ORTHO05D004515 1.5e-77 294.7 536 40.3
AagrBONN_evm.TU.Sc2ySwM_228.4136 Anthoceros agrestis HOM05D003850 ORTHO05D004515 1.3e-76 291.6 374 47.1
Medtr2g025620 Medicago truncatula HOM05D003850 ORTHO05D004515 4.8e-76 289.7 539 47.5
TPR.G34491 Trifolium pratense HOM05D003850 ORTHO05D004515 4.8e-76 289.7 219 66.7
Mapoly0105s0015 Marchantia polymorpha HOM05D003850 ORTHO05D004515 1.4e-75 288.1 551 40.5
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 1.2e-74 285.0 415 54.5
AUR62012783 Chenopodium quinoa HOM05D003850 ORTHO05D004515 3.4e-69 266.9 399 51.1
Peaxi162Scf00015g02110 Petunia axillaris HOM05D003850 ORTHO05D004515 2.7e-66 257.3 330 52.7
Dinv07398 Davidia involucrata HOM05D003850 ORTHO05D004515 2.5e-64 250.8 320 57.8
SEGI_38016 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 6.1e-63 246.1 335 50.1
QL09p006300 Quercus lobata HOM05D003850 ORTHO05D004515 6.4e-60 236.1 334 54.8
Sc17g0007710 Simmondsia chinensis HOM05D003850 ORTHO05D004515 9.8e-53 212.2 368 52.7
HPP92_001646 Vanilla planifolia HOM05D003850 ORTHO05D004515 2.2e-52 211.1 236 56.8
TPR.G13041 Trifolium pratense HOM05D003850 ORTHO05D004515 7.5e-45 186.0 339 51.6
FAN25G2646 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.7e-41 174.9 495 35.4
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 7.1e-35 152.9 181 59.1
CBR_g38333 Chara braunii HOM05D000019 ORTHO05D000002 4.6e-34 150.2 276 36.6
Actinidia11880 Actinidia chinensis HOM05D003850 ORTHO05D004515 3.1e-30 137.5 319 42.3
HPP92_001645 Vanilla planifolia HOM05D003850 ORTHO05D004515 6.9e-30 136.3 125 58.4
Gorai.002G145900 Gossypium raimondii HOM05D003850 ORTHO05D004515 9.9e-29 132.5 175 54.9
RcHm_v2.0_Chr6g0288941 Rosa chinensis HOM05D003850 ORTHO05D004515 4.2e-27 127.1 284 38.0
AagrBONN_evm.TU.Sc2ySwM_228.3786 Anthoceros agrestis HOM05D003850 ORTHO05D004515 4.9e-20 103.6 162 40.1
Gohir.D01G119450 Gossypium hirsutum HOM05D003850 ORTHO05D004515 1.2e-18 99.0 82 69.5
Lsat_1_v5_gn_3_78300 Lactuca sativa HOM05D002115 ORTHO05D002263 4.6e-18 97.1 57 80.7
VMungo0720G0179 Vigna mungo HOM05D003850 ORTHO05D004515 5.1e-17 93.6 51 82.4
Eucgr.A01650 Eucalyptus grandis HOM05D002251 ORTHO05D004515 4.8e-15 87.0 55 63.6
PSO339G5270 Papaver somniferum HOM05D003850 ORTHO05D004515 1.1e-14 85.9 57 64.9
CAN.G1186.27 Capsicum annuum HOM05D001620 ORTHO05D005461 3.4e-13 80.9 53 71.7
TAR629G2548 Trochodendron aralioides HOM05D003850 ORTHO05D004515 4.6e-10 70.5 334 26.6
PSO384G4333 Papaver somniferum HOM05D003850 ORTHO05D004515 3.3e-08 64.3 121 43.0
AagrBONN_evm.TU.Sc2ySwM_228.3787 Anthoceros agrestis HOM05D003850 ORTHO05D004515 8.1e-07 59.7 218 34.9
arahy.Tifrunner.gnm1.ann1.N7GRQP Arachis hypogaea HOM05D003850 ORTHO05D004515 1.8e-06 58.5 47 72.3
arahy.Tifrunner.gnm1.ann1.UE8YUV Arachis hypogaea HOM05D003850 ORTHO05D004515 1.8e-06 58.5 47 72.3
arahy.Tifrunner.gnm1.ann1.5H9H8Z Arachis hypogaea HOM05D003850 ORTHO05D004515 4.0e-06 57.4 78 51.3
SEGI_29277 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 6.9e-06 56.6 193 33.7
HPP92_001647 Vanilla planifolia HOM05D003850 ORTHO05D004515 6.9e-06 56.6 57 61.4


User provided reference genes

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