Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_744.g24241 Utricularia gibba HOM05D006129 ORTHO05D007446 0.0e+00 1565.1 781 100.0
Migut.B00306 Erythranthe guttata HOM05D006129 ORTHO05D007446 7.0e-278 960.7 774 62.1
MSTRG.20134 Avicennia marina HOM05D006129 ORTHO05D007446 2.2e-276 955.7 776 62.2
Dinv42121 Davidia involucrata HOM05D006129 ORTHO05D007446 2.0e-256 889.4 761 58.0
SGA_v2.0_scaffold58G20604 Striga asiatica HOM05D006129 ORTHO05D007446 9.1e-254 880.6 764 58.5
Lj5P206T15 Lonicera japonica HOM05D006129 ORTHO05D007446 5.9e-253 877.9 772 56.7
Duzib248G0151 Durio zibethinus HOM05D006129 ORTHO05D007446 2.9e-252 875.5 749 57.7
Oeu057674.1 Olea europaea HOM05D006129 ORTHO05D007446 3.8e-252 875.2 750 57.7
QL11p038411 Quercus lobata HOM05D006129 ORTHO05D007446 1.1e-251 873.6 739 57.2
GSVIVG01031785001 Vitis vinifera HOM05D006129 ORTHO05D007446 1.2e-250 870.2 737 56.0
Peaxi162Scf00789g00530 Petunia axillaris HOM05D006129 ORTHO05D007446 3.6e-250 868.6 751 57.4
Nn4g23272 Nelumbo nucifera HOM05D006129 ORTHO05D007446 1.5e-248 863.2 777 55.0
CSS0025307 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 5.7e-248 861.3 748 57.2
CSS0048591 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 7.5e-248 860.9 748 57.2
DCAR_003623 Daucus carota HOM05D006129 ORTHO05D007446 8.3e-247 857.4 757 56.3
Thecc.02G095400 Theobroma cacao HOM05D006129 ORTHO05D007446 1.1e-246 857.1 746 56.2
Haze_01881 Corylus avellana HOM05D006129 ORTHO05D007446 4.1e-246 855.1 776 54.4
Solyc11g066850.3 Solanum lycopersicum HOM05D006129 ORTHO05D007446 4.1e-246 855.1 757 56.4
Cfa005424 Carpinus fangiana HOM05D006129 ORTHO05D007446 7.0e-246 854.4 769 54.6
CiPaw.05G055300 Carya illinoinensis HOM05D006129 ORTHO05D007446 9.2e-246 854.0 740 56.8
Nitab4.5_0007303g0010 Nicotiana tabacum HOM05D006129 ORTHO05D007446 5.9e-245 851.3 716 57.7
TWI79G0519 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 7.8e-245 850.9 794 53.9
TWI31G0609 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 9.5e-243 844.0 758 55.3
vmacro02172 Vaccinium macrocarpon HOM05D006129 ORTHO05D007446 1.6e-242 843.2 739 56.2
CANSAT25G2181 Cannabis sativa HOM05D006129 ORTHO05D007446 2.1e-242 842.8 715 55.8
COL.COLO4_11724 Corchorus olitorius HOM05D006129 ORTHO05D007446 6.2e-242 841.3 730 55.8
Gohir.D01G006000 Gossypium hirsutum HOM05D006129 ORTHO05D007446 6.2e-242 841.3 747 55.4
Gohir.A01G005900 Gossypium hirsutum HOM05D006129 ORTHO05D007446 3.1e-241 839.0 747 55.2
Gorai.002G007000 Gossypium raimondii HOM05D006129 ORTHO05D007446 3.1e-241 839.0 746 55.8
Rhsim11G0169300 Rhododendron simsii HOM05D006129 ORTHO05D007446 6.8e-241 837.8 747 56.1
Dinv23594 Davidia involucrata HOM05D006129 ORTHO05D007446 9.8e-240 833.9 750 54.9
CAN.G644.34 Capsicum annuum HOM05D006129 ORTHO05D007446 1.3e-239 833.6 702 57.7
MD10G1089000 Malus domestica HOM05D006129 ORTHO05D007446 2.2e-239 832.8 744 55.5
Nitab4.5_0001453g0090 Nicotiana tabacum HOM05D006129 ORTHO05D007446 3.7e-239 832.0 801 52.6
RcHm_v2.0_Chr6g0259211 Rosa chinensis HOM05D006129 ORTHO05D007446 1.9e-238 829.7 752 53.3
Atru.BG.82.p Acer truncatum HOM05D006129 ORTHO05D007446 7.0e-238 827.8 658 58.2
MELO3C026699.2 Cucumis melo HOM05D006129 ORTHO05D007446 3.5e-237 825.5 772 53.9
ClCG07G001810 Citrullus lanatus HOM05D006129 ORTHO05D007446 4.6e-237 825.1 738 54.5
Sc08g0000140 Simmondsia chinensis HOM05D006129 ORTHO05D007446 5.0e-236 821.6 745 54.8
Cpa.g.sc62.53 Carica papaya HOM05D006129 ORTHO05D007446 2.5e-235 819.3 729 54.7
Sed0004701 Sechium edule HOM05D006129 ORTHO05D007446 2.5e-235 819.3 718 53.8
Lalb_Chr10g0095451 Lupinus albus HOM05D006129 ORTHO05D007446 4.3e-235 818.5 769 52.5
Ciclev10027854m.g Citrus clementina HOM05D006129 ORTHO05D007446 7.3e-235 817.8 741 54.4
FvH4_2g06900 Fragaria vesca HOM05D006129 ORTHO05D007446 2.8e-234 815.8 745 52.9
Lj2g0010354 Lotus japonicus HOM05D006129 ORTHO05D007446 2.8e-234 815.8 734 55.2
Lsat_1_v5_gn_5_113460 Lactuca sativa HOM05D006129 ORTHO05D007446 8.1e-234 814.3 728 55.1
CsaV3_3G028800 Cucumis sativus L. HOM05D006129 ORTHO05D007446 4.0e-233 812.0 743 53.8
FAN24G2628 Fragaria x ananassa HOM05D006129 ORTHO05D007446 6.8e-233 811.2 716 53.6
FAN15G2181 Fragaria x ananassa HOM05D006129 ORTHO05D007446 8.9e-233 810.8 762 51.8
FAN27G0179 Fragaria x ananassa HOM05D006129 ORTHO05D007446 8.9e-233 810.8 704 54.8
Aqoxy3G03484 Aquilegia oxysepala HOM05D006129 ORTHO05D007446 1.2e-232 810.4 774 52.2
ECA234G4125 Erigeron canadensis HOM05D006129 ORTHO05D007446 2.2e-231 806.2 737 53.3
Potri.009G106800 Populus trichocarpa HOM05D006129 ORTHO05D007446 2.2e-231 806.2 737 54.5
Eucgr.L01320 Eucalyptus grandis HOM05D006129 ORTHO05D007446 3.2e-230 802.4 746 53.8
Manes.17G094600 Manihot esculenta HOM05D006129 ORTHO05D007446 4.1e-230 802.0 769 52.4
Medtr1g026035 Medicago truncatula HOM05D006129 ORTHO05D007446 3.5e-229 798.9 690 54.8
TAR371G0476 Trochodendron aralioides HOM05D006129 ORTHO05D007446 4.6e-229 798.5 677 57.6
HanXRQChr10g0303221 Helianthus annuus HOM05D006129 ORTHO05D007446 1.7e-228 796.6 706 55.0
Prupe.8G116000 Prunus persica HOM05D006129 ORTHO05D007446 1.9e-227 793.1 732 54.0
Ca_13480_v3 Cicer arietinum L. HOM05D006129 ORTHO05D007446 4.3e-227 792.0 686 54.8
Glyma.20G009700 Glycine max HOM05D006129 ORTHO05D007446 6.2e-226 788.1 676 54.4
PGSC0003DMG400026525 Solanum tuberosum HOM05D006129 ORTHO05D007446 1.2e-224 783.9 655 58.0
PGR042G1055 Punica granatum HOM05D006129 ORTHO05D007446 1.7e-223 780.0 747 52.5
Actinidia12976 Actinidia chinensis HOM05D006129 ORTHO05D007446 6.4e-223 778.1 734 53.4
Phvul.002G308800 Phaseolus vulgaris HOM05D006129 ORTHO05D007446 6.4e-223 778.1 686 53.6
Sopen11g026560 Solanum pennellii HOM05D006129 ORTHO05D007446 6.4e-223 778.1 659 57.5
VMungo0464G0688 Vigna mungo HOM05D006129 ORTHO05D007446 8.4e-223 777.7 683 53.7
Glyma.07G178800 Glycine max HOM05D006129 ORTHO05D007446 7.1e-222 774.6 686 52.8
TPR.G26422 Trifolium pratense HOM05D006129 ORTHO05D007446 9.2e-222 774.2 686 53.8
THA.LOC104807348 Tarenaya hassleriana HOM05D006129 ORTHO05D007446 7.8e-221 771.2 681 54.5
CARHR106180 Cardamine hirsuta HOM05D006129 ORTHO05D007446 1.0e-220 770.8 713 52.2
EL10Ac9g21818 Beta vulgaris HOM05D006129 ORTHO05D007446 1.7e-220 770.0 713 52.2
AUR62011424 Chenopodium quinoa HOM05D006129 ORTHO05D007446 2.3e-220 769.6 733 52.0
Thhalv10022548m.g Eutrema salsugineum HOM05D006129 ORTHO05D007446 2.5e-219 766.1 684 53.2
Sp3g29130 Schrenkiella parvula HOM05D006129 ORTHO05D007446 4.3e-219 765.4 665 53.7
arahy.Tifrunner.gnm1.ann1.769PPM Arachis hypogaea HOM05D006129 ORTHO05D007446 8.1e-218 761.1 735 51.8
A07p04960 Brassica napus HOM05D006129 ORTHO05D007446 6.8e-217 758.1 654 54.7
Carub.0003s2972 Capsella rubella HOM05D006129 ORTHO05D007446 1.2e-216 757.3 676 54.0
AL3G47590 Arabidopsis lyrata HOM05D006129 ORTHO05D007446 7.6e-216 754.6 677 53.5
BcaC06g36090 Brassica carinata HOM05D006129 ORTHO05D007446 3.8e-215 752.3 654 54.4
C07p07940 Brassica napus HOM05D006129 ORTHO05D007446 3.8e-215 752.3 654 54.4
BolC7t41212H Brassica oleracea HOM05D006129 ORTHO05D007446 3.8e-215 752.3 654 54.4
BraA07t28289Z Brassica rapa HOM05D006129 ORTHO05D007446 3.2e-214 749.2 654 54.1
BcaB03g16332 Brassica carinata HOM05D006129 ORTHO05D007446 2.1e-213 746.5 654 54.3
Ah.01g006750 Amaranthus hybridus HOM05D006129 ORTHO05D007446 6.0e-213 745.0 711 50.9
Aa31LG8G13380 Aethionema arabicum HOM05D006129 ORTHO05D007446 1.7e-212 743.4 758 49.6
AT2G15820 Arabidopsis thaliana HOM05D006129 ORTHO05D007446 1.1e-209 734.2 685 52.3
Zm00001eb251880 Zea mays HOM05D006129 ORTHO05D007446 6.4e-207 724.9 769 49.3
Os02g0702000 Oryza sativa ssp. japonica HOM05D006129 ORTHO05D007446 4.6e-205 718.8 702 50.9
AUR62016636 Chenopodium quinoa HOM05D006129 ORTHO05D007446 3.4e-200 702.6 633 53.7
ATR0665G475 Amborella trichopoda HOM05D006129 ORTHO05D007446 1.4e-198 697.2 687 48.6
HPP92_022045 Vanilla planifolia HOM05D006129 ORTHO05D007446 1.6e-197 693.7 680 50.7
FAN20G2787 Fragaria x ananassa HOM05D006129 ORTHO05D007446 1.1e-187 661.0 612 52.5
Sabra09G0081600 Salix brachista HOM05D006129 ORTHO05D007446 5.7e-187 658.7 585 55.4
Medtr0381s0010 Medicago truncatula HOM05D006129 ORTHO05D007446 1.4e-174 617.5 605 49.9
SEGI_31419 Sequoiadendron giganteum HOM05D006129 ORTHO05D007446 7.9e-173 611.7 674 45.0
TAR629G1168 Trochodendron aralioides HOM05D006129 ORTHO05D007446 1.8e-172 610.5 537 54.7
Eucgr.G01504 Eucalyptus grandis HOM05D006129 ORTHO05D007446 2.7e-165 586.6 725 44.3
Eucgr.L00820 Eucalyptus grandis HOM05D006129 ORTHO05D007446 4.8e-154 549.3 508 54.9
CDE04G1903 Ceratophyllum demersum HOM05D006129 ORTHO05D007446 1.4e-153 547.7 650 43.4
Psat6g001360 Pisum sativum HOM05D006129 ORTHO05D007446 9.2e-137 491.9 681 38.6
Hund00318 Selenicereus undatus HOM05D006129 ORTHO05D007446 6.4e-130 469.2 409 55.3
Cc02_g18440 Coffea canephora HOM05D006129 ORTHO05D007446 1.8e-124 451.1 457 49.9
Atru.chr5.2887 Acer truncatum HOM05D006129 ORTHO05D007446 1.4e-113 414.8 529 44.4
TAR371G0992 Trochodendron aralioides HOM05D006129 ORTHO05D007446 4.9e-98 363.2 515 40.6
Atru.chr5.2823 Acer truncatum HOM05D006129 ORTHO05D007446 9.3e-97 359.0 495 43.0
Pp3c25_10050 Physcomitrium patens HOM05D006129 ORTHO05D007446 3.8e-90 337.0 659 31.7
QL11p038542 Quercus lobata HOM05D006129 ORTHO05D007446 3.0e-87 327.4 309 56.6
TAR371G0058 Trochodendron aralioides HOM05D006129 ORTHO05D007446 9.6e-86 322.4 319 52.7
Atru.chr5.2881 Acer truncatum HOM05D006129 ORTHO05D007446 9.3e-81 305.8 311 50.2
Atru.chr5.2826 Acer truncatum HOM05D006129 ORTHO05D007446 1.8e-76 291.6 336 50.0
AagrBONN_evm.TU.Sc2ySwM_344.1734 Anthoceros agrestis HOM05D006129 ORTHO05D007446 5.3e-68 263.5 649 28.2
Mapoly0036s0055 Marchantia polymorpha HOM05D006129 ORTHO05D007446 2.5e-62 244.6 658 25.8
SMO356G0628 Selaginella moellendorffii HOM05D006129 ORTHO05D007446 3.8e-58 230.7 688 25.0
TAR629G1760 Trochodendron aralioides HOM05D006129 ORTHO05D007446 1.1e-52 212.6 146 65.8
AagrBONN_evm.TU.Sc2ySwM_344.5085 Anthoceros agrestis HOM05D006129 ORTHO05D007446 1.4e-47 195.7 674 23.4
Cc02_g18430 Coffea canephora HOM05D006129 ORTHO05D007446 1.7e-45 188.7 164 56.7
arahy.Tifrunner.gnm1.ann1.SUMB0F Arachis hypogaea HOM05D006129 ORTHO05D007446 4.8e-45 187.2 161 57.8
Pp3c16_23700 Physcomitrium patens HOM05D006129 ORTHO05D007446 1.1e-41 176.0 676 23.5
Atru.chr5.2882 Acer truncatum HOM05D006129 ORTHO05D007446 1.7e-26 125.6 204 38.2
QL11p038477 Quercus lobata HOM05D006129 ORTHO05D007446 8.9e-23 113.2 72 63.9
Atru.chr5.2820 Acer truncatum HOM05D006129 ORTHO05D007446 4.7e-16 90.9 101 46.5
RcHm_v2.0_Chr6g0302241 Rosa chinensis HOM05D006129 ORTHO05D007446 5.2e-15 87.4 61 62.3
RcHm_v2.0_Chr1g0376021 Rosa chinensis HOM05D006129 ORTHO05D007446 3.7e-13 81.3 53 66.0
RcHm_v2.0_Chr2g0152801 Rosa chinensis HOM05D006129 ORTHO05D007446 7.0e-12 77.0 54 66.7
CBR_g19584 Chara braunii HOM05D006129 ORTHO05D007446 1.7e-10 72.4 592 19.4
CBR_g8924 Chara braunii HOM05D006129 ORTHO05D007446 7.3e-09 67.0 686 17.8
Eucgr.K02161 Eucalyptus grandis HOM05D001779 ORTHO05D001753 2.3e-07 62.0 204 25.5
MSTRG.20959 Avicennia marina HOM05D001779 ORTHO05D001753 4.4e-06 57.8 205 23.9
Cpa.g.sc8.143 Carica papaya HOM05D001779 ORTHO05D001753 5.8e-06 57.4 103 30.1
Prupe.8G201700 Prunus persica HOM05D001779 ORTHO05D001753 9.8e-06 56.6 142 26.1


User provided reference genes

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