Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6331 Utricularia gibba HOM05D003686 ORTHO05D004322 2.7e-116 422.2 238 100.0
MSTRG.21821 Avicennia marina HOM05D003686 ORTHO05D004322 1.9e-32 143.7 146 57.5
Migut.N00130 Erythranthe guttata HOM05D003686 ORTHO05D004322 3.2e-32 142.9 144 55.6
Solyc01g067830.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 1.1e-29 134.4 138 56.5
CAN.G185.6 Capsicum annuum HOM05D003686 ORTHO05D004322 3.6e-28 129.4 164 48.2
Sopen01g029780 Solanum pennellii HOM05D003686 ORTHO05D004322 6.2e-28 128.6 164 48.2
PGSC0003DMG400022854 Solanum tuberosum HOM05D003686 ORTHO05D004322 3.8e-25 119.4 107 59.8
Peaxi162Scf01067g00002 Petunia axillaris HOM05D003686 ORTHO05D004322 4.2e-24 115.9 107 60.7
GSVIVG01011011001 Vitis vinifera HOM05D003686 ORTHO05D004322 5.4e-24 115.5 127 54.3
CANSAT78G2257 Cannabis sativa HOM05D003686 ORTHO05D004322 7.1e-24 115.2 131 54.2
Peaxi162Scf01364g00015 Petunia axillaris HOM05D003686 ORTHO05D004322 7.1e-24 115.2 98 60.2
Eucgr.A00286 Eucalyptus grandis HOM05D003686 ORTHO05D004322 2.1e-23 113.6 157 48.4
Manes.05G068800 Manihot esculenta HOM05D003686 ORTHO05D004322 2.7e-23 113.2 131 54.2
Nn1g08910 Nelumbo nucifera HOM05D003686 ORTHO05D004322 6.0e-23 112.1 153 49.0
Ciclev10022350m.g Citrus clementina HOM05D003686 ORTHO05D004322 1.0e-22 111.3 127 53.5
TAR636G2878 Trochodendron aralioides HOM05D003686 ORTHO05D004322 1.0e-22 111.3 155 49.7
Gohir.A11G118400 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.3e-22 110.9 125 53.6
Gorai.007G132200 Gossypium raimondii HOM05D003686 ORTHO05D004322 1.3e-22 110.9 125 52.8
PGR031G1643 Punica granatum HOM05D003686 ORTHO05D004322 1.3e-22 110.9 136 51.5
COL.COLO4_08036 Corchorus olitorius HOM05D003686 ORTHO05D004322 1.7e-22 110.5 130 53.1
Eucgr.B02749 Eucalyptus grandis HOM05D003686 ORTHO05D004322 1.7e-22 110.5 121 56.2
Aqoxy2G03146 Aquilegia oxysepala HOM05D003686 ORTHO05D004322 2.3e-22 110.2 142 50.7
QL04p005272 Quercus lobata HOM05D003686 ORTHO05D004322 2.3e-22 110.2 145 50.3
CiPaw.07G099200 Carya illinoinensis HOM05D003686 ORTHO05D004322 5.1e-22 109.0 140 53.6
Manes.01G213100 Manihot esculenta HOM05D003686 ORTHO05D004322 5.1e-22 109.0 131 52.7
Hma1.2p1_0643F.1_g194700 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 6.6e-22 108.6 120 55.8
Hma1.2p1_0643F.1_g194711 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 6.6e-22 108.6 120 55.8
Atru.chr5.1287 Acer truncatum HOM05D003686 ORTHO05D004322 8.7e-22 108.2 128 53.1
Potri.003G058400 Populus trichocarpa HOM05D003686 ORTHO05D004322 8.7e-22 108.2 127 52.8
TWI14G0352 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 1.1e-21 107.8 124 55.6
TAR362G1277 Trochodendron aralioides HOM05D003686 ORTHO05D004322 1.1e-21 107.8 152 50.7
TAR365G0683 Trochodendron aralioides HOM05D003686 ORTHO05D004322 1.1e-21 107.8 146 51.4
Gohir.D11G123300 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.5e-21 107.5 150 47.3
Hma1.2p1_0643F.1_g194695 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.5e-21 107.5 110 56.4
Hma1.2p1_0643F.1_g194710 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.5e-21 107.5 110 56.4
PSO801G0146 Papaver somniferum HOM05D003686 ORTHO05D004322 1.5e-21 107.5 129 52.7
QL07p015848 Quercus lobata HOM05D003686 ORTHO05D004322 2.5e-21 106.7 145 50.3
Haze_04804 Corylus avellana HOM05D003686 ORTHO05D004322 3.3e-21 106.3 141 50.4
MD03G1275200 Malus domestica HOM05D003686 ORTHO05D004322 3.3e-21 106.3 155 47.1
TWI23G0547 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 3.3e-21 106.3 124 54.0
CDE11G0890 Ceratophyllum demersum HOM05D003686 ORTHO05D004322 5.6e-21 105.5 137 48.9
Cpa.g.sc9.157 Carica papaya HOM05D003686 ORTHO05D004322 7.3e-21 105.1 150 48.7
Nitab4.5_0001149g0030 Nicotiana tabacum HOM05D003686 ORTHO05D004322 9.6e-21 104.8 133 50.4
ATR0706G002 Amborella trichopoda HOM05D003686 ORTHO05D004322 1.3e-20 104.4 145 48.3
Prupe.8G251800 Prunus persica HOM05D003686 ORTHO05D004322 1.3e-20 104.4 118 54.2
Os02g0266100 Oryza sativa ssp. japonica HOM05D003686 ORTHO05D004322 1.6e-20 104.0 145 50.3
QL93p0358_0011 Quercus lobata HOM05D003686 ORTHO05D004322 1.6e-20 104.0 127 52.0
Thecc.10G102800 Theobroma cacao HOM05D003686 ORTHO05D004322 1.6e-20 104.0 111 54.1
FAN20G0133 Fragaria x ananassa HOM05D003686 ORTHO05D004322 2.1e-20 103.6 120 55.0
FAN27G0391 Fragaria x ananassa HOM05D003686 ORTHO05D004322 2.1e-20 103.6 120 55.0
Cfa010467 Carpinus fangiana HOM05D003686 ORTHO05D004322 2.8e-20 103.2 125 52.0
Nitab4.5_0001624g0040 Nicotiana tabacum HOM05D003686 ORTHO05D004322 3.6e-20 102.8 107 58.9
FAN15G3346 Fragaria x ananassa HOM05D003686 ORTHO05D004322 4.8e-20 102.4 123 53.7
ClCG09G006530 Citrullus lanatus HOM05D003686 ORTHO05D004322 1.1e-19 101.3 125 53.6
Duzib133G0241 Durio zibethinus HOM05D003686 ORTHO05D004322 1.1e-19 101.3 111 53.2
CsaV3_7G028310 Cucumis sativus L. HOM05D003686 ORTHO05D004322 1.4e-19 100.9 125 52.8
Gohir.D08G053600 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.4e-19 100.9 127 50.4
Gorai.004G053600 Gossypium raimondii HOM05D003686 ORTHO05D004322 1.4e-19 100.9 127 50.4
RcHm_v2.0_Chr6g0292481 Rosa chinensis HOM05D003686 ORTHO05D004322 1.4e-19 100.9 159 47.8
Phvul.007G166600 Phaseolus vulgaris HOM05D003686 ORTHO05D004322 1.8e-19 100.5 131 48.9
Duzib138G0197 Durio zibethinus HOM05D003686 ORTHO05D004322 2.4e-19 100.1 98 56.1
Sed0010038 Sechium edule HOM05D003686 ORTHO05D004322 2.4e-19 100.1 125 52.8
Zm00001eb203990 Zea mays HOM05D003686 ORTHO05D004322 3.1e-19 99.8 133 50.4
FvH4_2g24650 Fragaria vesca HOM05D003686 ORTHO05D004322 4.0e-19 99.4 120 53.3
Glyma.10G021900 Glycine max HOM05D003686 ORTHO05D004322 4.0e-19 99.4 137 47.4
Glyma.02G152300 Glycine max HOM05D003686 ORTHO05D004322 5.3e-19 99.0 150 44.7
VMungo0720G0802 Vigna mungo HOM05D003686 ORTHO05D004322 6.9e-19 98.6 128 49.2
Lalb_Chr02g0143061 Lupinus albus HOM05D003686 ORTHO05D004322 9.0e-19 98.2 131 48.1
Actinidia00703 Actinidia chinensis HOM05D003686 ORTHO05D004322 1.5e-18 97.4 128 49.2
Sed0008045 Sechium edule HOM05D003686 ORTHO05D004322 1.5e-18 97.4 93 57.0
MELO3C015891.2 Cucumis melo HOM05D003686 ORTHO05D004322 3.4e-18 96.3 121 52.1
TPR.G15798 Trifolium pratense HOM05D003686 ORTHO05D004322 3.4e-18 96.3 124 48.4
CiPaw.08G100800 Carya illinoinensis HOM05D003686 ORTHO05D004322 4.5e-18 95.9 99 55.6
Gohir.A08G043900 Gossypium hirsutum HOM05D003686 ORTHO05D004322 4.5e-18 95.9 139 48.2
Lalb_Chr06g0163281 Lupinus albus HOM05D003686 ORTHO05D004322 4.5e-18 95.9 132 47.0
Medtr7g107640 Medicago truncatula HOM05D003686 ORTHO05D004322 4.5e-18 95.9 128 46.9
SGA_v2.0_scaffold89G27564 Striga asiatica HOM05D003686 ORTHO05D004322 5.8e-18 95.5 166 42.8
THA.LOC104826011 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 7.6e-18 95.1 138 48.6
Medtr1g088990 Medicago truncatula HOM05D003686 ORTHO05D004322 9.9e-18 94.7 125 47.2
Sp6g03160 Schrenkiella parvula HOM05D003686 ORTHO05D004322 1.3e-17 94.4 113 47.8
DCAR_007018 Daucus carota HOM05D003686 ORTHO05D004322 1.7e-17 94.0 142 45.1
Thhalv10028986m.g Eutrema salsugineum HOM05D003686 ORTHO05D004322 2.9e-17 93.2 117 47.0
BolC3t16013H Brassica oleracea HOM05D003686 ORTHO05D004322 3.8e-17 92.8 121 46.3
C03p37160 Brassica napus HOM05D003686 ORTHO05D004322 4.9e-17 92.4 125 45.6
MD11G1297300 Malus domestica HOM05D003686 ORTHO05D004322 4.9e-17 92.4 144 42.4
BcaC01g06704 Brassica carinata HOM05D003686 ORTHO05D004322 1.1e-16 91.3 110 48.2
A03p30600 Brassica napus HOM05D003686 ORTHO05D004322 1.1e-16 91.3 121 45.5
BraA03t12240Z Brassica rapa HOM05D003686 ORTHO05D004322 1.1e-16 91.3 121 45.5
Mapoly0103s0046 Marchantia polymorpha HOM05D003686 ORTHO05D004322 1.9e-16 90.5 131 46.6
vmacro17192 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.9e-16 90.5 133 45.9
Ah.12g061550 Amaranthus hybridus HOM05D003686 ORTHO05D004322 2.4e-16 90.1 131 48.1
arahy.Tifrunner.gnm1.ann1.MV1AMG Arachis hypogaea HOM05D003686 ORTHO05D004322 2.4e-16 90.1 129 46.5
BcaB01g02510 Brassica carinata HOM05D003686 ORTHO05D004322 2.4e-16 90.1 110 47.3
CARHR251560 Cardamine hirsuta HOM05D003686 ORTHO05D004322 2.4e-16 90.1 117 49.6
BcaB05g23688 Brassica carinata HOM05D003686 ORTHO05D004322 3.2e-16 89.7 113 46.0
BcaB05g23689 Brassica carinata HOM05D003686 ORTHO05D004322 3.2e-16 89.7 113 46.0
BolC2t10013H Brassica oleracea HOM05D003686 ORTHO05D004322 3.2e-16 89.7 123 46.3
ECA247G2101 Erigeron canadensis HOM05D003686 ORTHO05D004322 3.2e-16 89.7 158 42.4
A09p02440 Brassica napus HOM05D003686 ORTHO05D004322 4.2e-16 89.4 110 46.4
BraA09t35891Z Brassica rapa HOM05D003686 ORTHO05D004322 4.2e-16 89.4 110 46.4
ECA248G2178 Erigeron canadensis HOM05D003686 ORTHO05D004322 4.2e-16 89.4 142 45.1
Ca_10377_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 5.4e-16 89.0 133 42.9
Ca_29655_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 5.4e-16 89.0 133 42.9
Ca_09109_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 7.1e-16 88.6 137 45.3
Sabra03G0032800 Salix brachista HOM05D003686 ORTHO05D004322 7.1e-16 88.6 118 52.5
THA.LOC104817532 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 7.1e-16 88.6 138 44.9
AT4G03120 Arabidopsis thaliana HOM05D003686 ORTHO05D004322 9.3e-16 88.2 122 46.7
BcaC03g16209 Brassica carinata HOM05D003686 ORTHO05D004322 1.2e-15 87.8 119 47.9
Lsat_1_v5_gn_5_188760 Lactuca sativa HOM05D003686 ORTHO05D004322 1.6e-15 87.4 139 43.9
Psat3g024960 Pisum sativum HOM05D003686 ORTHO05D004322 1.6e-15 87.4 110 47.3
BraA02t07500Z Brassica rapa HOM05D003686 ORTHO05D004322 2.1e-15 87.0 145 42.1
Lj1g0025208 Lotus japonicus HOM05D003686 ORTHO05D004322 2.7e-15 86.7 170 38.8
PSO339G4974 Papaver somniferum HOM05D003686 ORTHO05D004322 3.5e-15 86.3 128 45.3
Rhsim13G0017700 Rhododendron simsii HOM05D003686 ORTHO05D004322 3.5e-15 86.3 154 42.9
DCAR_012430 Daucus carota HOM05D003686 ORTHO05D004322 4.6e-15 85.9 143 43.4
Nn2g12370 Nelumbo nucifera HOM05D003686 ORTHO05D004322 4.6e-15 85.9 124 48.4
BcaB01g01979 Brassica carinata HOM05D003686 ORTHO05D004322 6.0e-15 85.5 169 36.7
BolC9t53184H Brassica oleracea HOM05D003686 ORTHO05D004322 6.0e-15 85.5 169 36.7
Lj5g0005016 Lotus japonicus HOM05D003686 ORTHO05D004322 6.0e-15 85.5 110 50.9
Lj3A810T51 Lonicera japonica HOM05D003686 ORTHO05D004322 7.9e-15 85.1 130 45.4
Dinv11293 Davidia involucrata HOM05D003686 ORTHO05D004322 1.0e-14 84.7 113 49.6
Mapoly0087s0074 Marchantia polymorpha HOM05D003686 ORTHO05D004322 1.0e-14 84.7 133 45.9
Dinv11297 Davidia involucrata HOM05D003686 ORTHO05D004322 1.3e-14 84.3 113 49.6
HanXRQChr11g0330151 Helianthus annuus HOM05D003686 ORTHO05D004322 1.8e-14 84.0 137 45.3
HanXRQChr01g0002781 Helianthus annuus HOM05D003686 ORTHO05D004322 3.9e-14 82.8 138 44.9
unitig_61.g26148 Utricularia gibba HOM05D003686 ORTHO05D004322 5.1e-14 82.4 131 42.0
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 8.7e-14 81.6 121 47.9
Carub.0006s3393 Capsella rubella HOM05D003686 ORTHO05D004322 1.1e-13 81.3 89 50.6
HPP92_021461 Vanilla planifolia HOM05D003686 ORTHO05D004322 1.9e-13 80.5 120 47.5
AUR62025901 Chenopodium quinoa HOM05D003686 ORTHO05D004322 3.3e-13 79.7 141 45.4
AUR62025902 Chenopodium quinoa HOM05D003686 ORTHO05D004322 3.3e-13 79.7 141 45.4
A02p25120 Brassica napus HOM05D003686 ORTHO05D004322 4.3e-13 79.3 132 40.9
SGA_v2.0_scaffold36G14363 Striga asiatica HOM05D003686 ORTHO05D004322 5.6e-13 79.0 142 38.0
arahy.Tifrunner.gnm1.ann1.TAZ1K7 Arachis hypogaea HOM05D003686 ORTHO05D004322 7.4e-13 78.6 159 37.7
SGA_v2.0_scaffold172G39059 Striga asiatica HOM05D003686 ORTHO05D004322 7.4e-13 78.6 144 36.8
Cc01_g20160 Coffea canephora HOM05D003686 ORTHO05D004322 1.3e-12 77.8 162 37.0
Sc25g0004660 Simmondsia chinensis HOM05D003686 ORTHO05D004322 1.3e-12 77.8 125 42.4
FAN20G1534 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.6e-12 77.4 91 56.0
Nitab4.5_0004238g0080 Nicotiana tabacum HOM05D003686 ORTHO05D004322 3.7e-12 76.3 117 42.7
Nitab4.5_0000295g0050 Nicotiana tabacum HOM05D003686 ORTHO05D004322 4.8e-12 75.9 117 43.6
Pp3c12_26180 Physcomitrium patens HOM05D003686 ORTHO05D004322 4.8e-12 75.9 126 42.1
CAN.G1006.23 Capsicum annuum HOM05D003686 ORTHO05D004322 6.2e-12 75.5 136 41.2
COL.COLO4_34092 Corchorus olitorius HOM05D003686 ORTHO05D004322 6.2e-12 75.5 110 44.5
Psat6g168000 Pisum sativum HOM05D003686 ORTHO05D004322 6.2e-12 75.5 99 48.5
Oeu022800.1 Olea europaea HOM05D003686 ORTHO05D004322 8.1e-12 75.1 92 46.7
Oeu022802.1 Olea europaea HOM05D003686 ORTHO05D004322 8.1e-12 75.1 92 46.7
Solyc06g008860.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 1.1e-11 74.7 136 41.2
Sopen06g003610 Solanum pennellii HOM05D003686 ORTHO05D004322 1.1e-11 74.7 136 41.2
FAN24G2968 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.4e-11 74.3 106 50.0
Pp3c4_170 Physcomitrium patens HOM05D003686 ORTHO05D004322 1.4e-11 74.3 126 42.1
CSS0048633 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 2.4e-11 73.6 130 43.8
AUR62029649 Chenopodium quinoa HOM05D003686 ORTHO05D004322 3.1e-11 73.2 134 44.8
PGSC0003DMG400021997 Solanum tuberosum HOM05D003686 ORTHO05D004322 1.2e-10 71.2 167 38.9
vmacro14959 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 2.0e-10 70.5 126 42.9
Duzib211G0369 Durio zibethinus HOM05D003686 ORTHO05D004322 2.6e-10 70.1 83 50.6
Migut.N02118 Erythranthe guttata HOM05D003686 ORTHO05D004322 3.4e-10 69.7 118 43.2
Migut.O00643 Erythranthe guttata HOM05D003686 ORTHO05D004322 3.4e-10 69.7 118 43.2
AagrBONN_evm.TU.Sc2ySwM_228.930 Anthoceros agrestis HOM05D003686 ORTHO05D004322 5.8e-10 68.9 128 39.1
Lj2P1184T34 Lonicera japonica HOM05D003686 ORTHO05D004322 7.6e-10 68.6 110 42.7
MSTRG.12592 Avicennia marina HOM05D003686 ORTHO05D004322 1.7e-09 67.4 125 40.0
EL10Ac2g03326 Beta vulgaris HOM05D003686 ORTHO05D004322 2.9e-09 66.6 183 37.7
HPP92_021468 Vanilla planifolia HOM05D003686 ORTHO05D004322 3.8e-09 66.2 53 60.4
vmacro02511 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 4.9e-09 65.9 79 54.4
CSS0007511 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 6.4e-09 65.5 88 48.9
CSS0037271 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 6.4e-09 65.5 88 48.9
SalBow6G6913 Salvia bowleyana HOM05D003686 ORTHO05D004322 2.5e-08 63.5 140 39.3
SalBow8G5349 Salvia bowleyana HOM05D003686 ORTHO05D004322 2.5e-08 63.5 140 39.3
Lj5g0025755 Lotus japonicus HOM05D003686 ORTHO05D009933 3.2e-08 63.2 40 70.0
C09p02540 Brassica napus HOM05D003686 ORTHO05D004322 3.5e-07 59.7 140 33.6
Psat3g182400 Pisum sativum HOM05D003686 ORTHO05D004322 3.5e-07 59.7 55 50.9
Psat0s3642g0040 Pisum sativum HOM05D000068 ORTHO05D025728 1.3e-06 57.8 54 53.7
vmacro14957 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 3.0e-06 56.6 128 38.3
Hund24902 Selenicereus undatus HOM05D003686 ORTHO05D004322 6.7e-06 55.5 106 45.3


User provided reference genes

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