Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.MV1AMG Arachis hypogaea HOM05D003686 ORTHO05D004322 2.9e-90 335.5 206 100.0
arahy.Tifrunner.gnm1.ann1.TAZ1K7 Arachis hypogaea HOM05D003686 ORTHO05D004322 2.1e-80 302.8 236 84.3
Glyma.10G021900 Glycine max HOM05D003686 ORTHO05D004322 1.0e-71 273.9 207 71.0
Lalb_Chr06g0163281 Lupinus albus HOM05D003686 ORTHO05D004322 2.0e-67 259.6 209 70.8
Phvul.007G166600 Phaseolus vulgaris HOM05D003686 ORTHO05D004322 2.0e-67 259.6 207 76.3
Glyma.02G152300 Glycine max HOM05D003686 ORTHO05D004322 6.5e-66 254.6 207 69.6
VMungo0720G0802 Vigna mungo HOM05D003686 ORTHO05D004322 2.7e-64 249.2 206 68.0
Ca_10377_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 2.3e-63 246.1 207 69.1
Ca_29655_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 2.3e-63 246.1 207 69.1
Lalb_Chr02g0143061 Lupinus albus HOM05D003686 ORTHO05D004322 5.1e-63 245.0 209 67.9
Lj1g0025208 Lotus japonicus HOM05D003686 ORTHO05D004322 6.9e-60 234.6 209 63.6
TPR.G15798 Trifolium pratense HOM05D003686 ORTHO05D004322 2.6e-59 232.6 210 67.6
Lj5g0005016 Lotus japonicus HOM05D003686 ORTHO05D004322 2.2e-58 229.6 211 66.8
QL07p015848 Quercus lobata HOM05D003686 ORTHO05D004322 2.7e-56 222.6 208 60.6
QL04p005272 Quercus lobata HOM05D003686 ORTHO05D004322 4.7e-56 221.9 208 60.1
Manes.01G213100 Manihot esculenta HOM05D003686 ORTHO05D004322 1.8e-55 219.9 211 64.9
Potri.003G058400 Populus trichocarpa HOM05D003686 ORTHO05D004322 8.8e-55 217.6 210 61.9
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 3.3e-54 215.7 235 63.8
QL93p0358_0011 Quercus lobata HOM05D003686 ORTHO05D004322 6.3e-53 211.5 208 60.1
Haze_04804 Corylus avellana HOM05D003686 ORTHO05D004322 1.1e-52 210.7 209 57.9
FAN20G0133 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.8e-52 209.9 209 63.2
FAN27G0391 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.8e-52 209.9 209 63.2
Medtr1g088990 Medicago truncatula HOM05D003686 ORTHO05D004322 1.8e-52 209.9 213 69.0
CiPaw.07G099200 Carya illinoinensis HOM05D003686 ORTHO05D004322 9.1e-52 207.6 210 62.9
Atru.chr5.1287 Acer truncatum HOM05D003686 ORTHO05D004322 3.5e-51 205.7 209 62.7
RcHm_v2.0_Chr6g0292481 Rosa chinensis HOM05D003686 ORTHO05D004322 5.9e-51 204.9 208 61.1
COL.COLO4_08036 Corchorus olitorius HOM05D003686 ORTHO05D004322 1.0e-50 204.1 210 62.9
TWI14G0352 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 1.3e-50 203.8 209 61.7
Ciclev10022350m.g Citrus clementina HOM05D003686 ORTHO05D004322 1.7e-50 203.4 210 69.0
FvH4_2g24650 Fragaria vesca HOM05D003686 ORTHO05D004322 2.2e-50 203.0 209 62.2
Gorai.004G053600 Gossypium raimondii HOM05D003686 ORTHO05D004322 2.2e-50 203.0 210 60.5
Duzib133G0241 Durio zibethinus HOM05D003686 ORTHO05D004322 2.9e-50 202.6 210 62.9
FAN15G3346 Fragaria x ananassa HOM05D003686 ORTHO05D004322 2.9e-50 202.6 212 61.8
TAR365G0683 Trochodendron aralioides HOM05D003686 ORTHO05D004322 5.0e-50 201.8 239 54.0
TAR636G2878 Trochodendron aralioides HOM05D003686 ORTHO05D004322 6.5e-50 201.4 206 57.8
Gohir.A08G043900 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.9e-49 199.9 218 56.9
Manes.05G068800 Manihot esculenta HOM05D003686 ORTHO05D004322 1.9e-49 199.9 209 67.0
TWI23G0547 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 2.5e-49 199.5 207 65.7
Gohir.D11G123300 Gossypium hirsutum HOM05D003686 ORTHO05D004322 3.2e-49 199.1 216 55.1
Eucgr.A00286 Eucalyptus grandis HOM05D003686 ORTHO05D004322 1.2e-48 197.2 210 57.6
Gorai.007G132200 Gossypium raimondii HOM05D003686 ORTHO05D004322 1.6e-48 196.8 210 64.3
Gohir.A11G118400 Gossypium hirsutum HOM05D003686 ORTHO05D004322 2.7e-48 196.1 210 63.8
Duzib138G0197 Durio zibethinus HOM05D003686 ORTHO05D004322 4.7e-48 195.3 209 67.9
Ca_09109_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 6.1e-48 194.9 179 61.5
CANSAT78G2257 Cannabis sativa HOM05D003686 ORTHO05D004322 1.8e-47 193.4 220 60.9
TAR362G1277 Trochodendron aralioides HOM05D003686 ORTHO05D004322 2.3e-47 193.0 198 58.1
CiPaw.08G100800 Carya illinoinensis HOM05D003686 ORTHO05D004322 5.2e-47 191.8 208 64.4
Nn1g08910 Nelumbo nucifera HOM05D003686 ORTHO05D004322 6.7e-47 191.4 204 59.8
Gohir.D08G053600 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.5e-46 190.3 210 58.6
Psat6g168000 Pisum sativum HOM05D003686 ORTHO05D004322 3.3e-46 189.1 193 64.2
ClCG09G006530 Citrullus lanatus HOM05D003686 ORTHO05D004322 4.4e-46 188.7 208 63.9
Eucgr.B02749 Eucalyptus grandis HOM05D003686 ORTHO05D004322 2.2e-45 186.4 210 63.3
Dinv11293 Davidia involucrata HOM05D003686 ORTHO05D004322 3.7e-45 185.7 213 60.1
Actinidia00703 Actinidia chinensis HOM05D003686 ORTHO05D004322 6.3e-45 184.9 207 58.5
Sed0010038 Sechium edule HOM05D003686 ORTHO05D004322 6.3e-45 184.9 209 63.6
Dinv11297 Davidia involucrata HOM05D003686 ORTHO05D004322 1.1e-44 184.1 213 59.6
Aqoxy2G03146 Aquilegia oxysepala HOM05D003686 ORTHO05D004322 2.4e-44 183.0 203 55.2
Rhsim13G0017700 Rhododendron simsii HOM05D003686 ORTHO05D004322 4.1e-44 182.2 222 51.4
CsaV3_7G028310 Cucumis sativus L. HOM05D003686 ORTHO05D004322 7.0e-44 181.4 209 63.6
Psat3g024960 Pisum sativum HOM05D003686 ORTHO05D004322 7.0e-44 181.4 181 64.6
Medtr7g107640 Medicago truncatula HOM05D003686 ORTHO05D004322 9.1e-44 181.0 182 69.2
vmacro17192 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.6e-43 180.3 206 51.9
MELO3C015891.2 Cucumis melo HOM05D003686 ORTHO05D004322 5.9e-43 178.3 209 65.6
DCAR_007018 Daucus carota HOM05D003686 ORTHO05D004322 8.5e-42 174.5 212 54.2
Sabra03G0032800 Salix brachista HOM05D003686 ORTHO05D004322 1.5e-41 173.7 193 57.0
Cpa.g.sc9.157 Carica papaya HOM05D003686 ORTHO05D004322 1.9e-41 173.3 210 54.3
Lsat_1_v5_gn_5_188760 Lactuca sativa HOM05D003686 ORTHO05D004322 1.6e-40 170.2 214 54.7
FAN20G1534 Fragaria x ananassa HOM05D003686 ORTHO05D004322 2.7e-40 169.5 192 59.9
Thecc.10G102800 Theobroma cacao HOM05D003686 ORTHO05D004322 2.7e-40 169.5 224 56.7
MD03G1275200 Malus domestica HOM05D003686 ORTHO05D004322 8.0e-40 167.9 214 49.5
PGR031G1643 Punica granatum HOM05D003686 ORTHO05D004322 1.8e-39 166.8 211 51.7
MD11G1297300 Malus domestica HOM05D003686 ORTHO05D004322 8.8e-39 164.5 210 51.9
GSVIVG01011011001 Vitis vinifera HOM05D003686 ORTHO05D004322 1.5e-38 163.7 129 69.8
CDE11G0890 Ceratophyllum demersum HOM05D003686 ORTHO05D004322 4.4e-38 162.2 137 67.9
Nitab4.5_0000295g0050 Nicotiana tabacum HOM05D003686 ORTHO05D004322 4.4e-38 162.2 214 50.9
FAN24G2968 Fragaria x ananassa HOM05D003686 ORTHO05D004322 7.5e-38 161.4 192 55.7
Nn2g12370 Nelumbo nucifera HOM05D003686 ORTHO05D004322 1.3e-37 160.6 198 53.0
PSO801G0146 Papaver somniferum HOM05D003686 ORTHO05D004322 1.3e-37 160.6 204 58.3
Sed0008045 Sechium edule HOM05D003686 ORTHO05D004322 2.8e-37 159.5 210 59.0
Cc01_g20160 Coffea canephora HOM05D003686 ORTHO05D004322 6.3e-37 158.3 228 48.2
Thhalv10028986m.g Eutrema salsugineum HOM05D003686 ORTHO05D004322 6.3e-37 158.3 210 58.1
HanXRQChr01g0002781 Helianthus annuus HOM05D003686 ORTHO05D004322 6.3e-37 158.3 224 55.4
ATR0706G002 Amborella trichopoda HOM05D003686 ORTHO05D004322 1.4e-36 157.1 207 50.2
ECA248G2178 Erigeron canadensis HOM05D003686 ORTHO05D004322 1.8e-36 156.8 270 47.4
Cfa010467 Carpinus fangiana HOM05D003686 ORTHO05D004322 2.4e-36 156.4 125 69.6
Solyc01g067830.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 2.4e-36 156.4 196 50.0
Solyc06g008860.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 4.1e-36 155.6 215 50.7
PGSC0003DMG400021997 Solanum tuberosum HOM05D003686 ORTHO05D004322 5.4e-36 155.2 215 50.2
DCAR_012430 Daucus carota HOM05D003686 ORTHO05D004322 7.0e-36 154.8 207 49.8
THA.LOC104826011 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 7.0e-36 154.8 210 50.5
Sopen06g003610 Solanum pennellii HOM05D003686 ORTHO05D004322 9.1e-36 154.5 215 50.7
Sopen01g029780 Solanum pennellii HOM05D003686 ORTHO05D004322 1.6e-35 153.7 196 54.1
Nitab4.5_0004238g0080 Nicotiana tabacum HOM05D003686 ORTHO05D004322 3.5e-35 152.5 214 49.5
A03p30600 Brassica napus HOM05D003686 ORTHO05D004322 1.3e-34 150.6 210 57.6
HanXRQChr11g0330151 Helianthus annuus HOM05D003686 ORTHO05D004322 1.7e-34 150.2 208 49.0
Os02g0266100 Oryza sativa ssp. japonica HOM05D003686 ORTHO05D004322 1.7e-34 150.2 114 71.9
Migut.N00130 Erythranthe guttata HOM05D003686 ORTHO05D004322 3.8e-34 149.1 215 48.4
BcaB05g23688 Brassica carinata HOM05D003686 ORTHO05D004322 8.6e-34 147.9 107 73.8
BcaB05g23689 Brassica carinata HOM05D003686 ORTHO05D004322 8.6e-34 147.9 107 73.8
Prupe.8G251800 Prunus persica HOM05D003686 ORTHO05D004322 8.6e-34 147.9 110 73.6
PGSC0003DMG400022854 Solanum tuberosum HOM05D003686 ORTHO05D004322 1.1e-33 147.5 201 54.7
Zm00001eb203990 Zea mays HOM05D003686 ORTHO05D004322 1.1e-33 147.5 113 70.8
MSTRG.21821 Avicennia marina HOM05D003686 ORTHO05D004322 1.9e-33 146.7 195 49.2
Sp6g03160 Schrenkiella parvula HOM05D003686 ORTHO05D004322 1.9e-33 146.7 207 55.6
BraA03t12240Z Brassica rapa HOM05D003686 ORTHO05D004322 3.3e-33 146.0 208 57.2
AT4G03120 Arabidopsis thaliana HOM05D003686 ORTHO05D004322 4.2e-33 145.6 98 73.5
CARHR251560 Cardamine hirsuta HOM05D003686 ORTHO05D004322 4.2e-33 145.6 177 60.5
CAN.G185.6 Capsicum annuum HOM05D003686 ORTHO05D004322 7.2e-33 144.8 207 52.7
BcaB01g01979 Brassica carinata HOM05D003686 ORTHO05D004322 9.5e-33 144.4 208 52.4
PSO339G4974 Papaver somniferum HOM05D003686 ORTHO05D004322 9.5e-33 144.4 209 58.9
THA.LOC104817532 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 9.5e-33 144.4 132 62.9
CAN.G1006.23 Capsicum annuum HOM05D003686 ORTHO05D004322 1.2e-32 144.1 217 46.1
Ah.12g061550 Amaranthus hybridus HOM05D003686 ORTHO05D004322 2.1e-32 143.3 230 52.6
Sc25g0004660 Simmondsia chinensis HOM05D003686 ORTHO05D004322 2.1e-32 143.3 193 58.5
BcaC01g06704 Brassica carinata HOM05D003686 ORTHO05D004322 2.8e-32 142.9 96 77.1
BcaB01g02510 Brassica carinata HOM05D003686 ORTHO05D004322 3.6e-32 142.5 96 77.1
Peaxi162Scf01364g00015 Petunia axillaris HOM05D003686 ORTHO05D004322 4.7e-32 142.1 103 68.9
C03p37160 Brassica napus HOM05D003686 ORTHO05D004322 6.1e-32 141.7 101 75.2
Carub.0006s3393 Capsella rubella HOM05D003686 ORTHO05D004322 1.0e-31 141.0 209 58.4
BolC3t16013H Brassica oleracea HOM05D003686 ORTHO05D004322 1.4e-31 140.6 99 74.7
BolC9t53184H Brassica oleracea HOM05D003686 ORTHO05D004322 2.3e-31 139.8 206 51.9
ECA247G2101 Erigeron canadensis HOM05D003686 ORTHO05D004322 6.8e-31 138.3 243 52.3
Hma1.2p1_0643F.1_g194695 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 8.9e-31 137.9 105 70.5
Hma1.2p1_0643F.1_g194700 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 8.9e-31 137.9 105 70.5
Hma1.2p1_0643F.1_g194710 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 8.9e-31 137.9 105 70.5
Hma1.2p1_0643F.1_g194711 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 8.9e-31 137.9 105 70.5
Mapoly0103s0046 Marchantia polymorpha HOM05D003686 ORTHO05D004322 1.2e-30 137.5 106 70.8
AUR62029649 Chenopodium quinoa HOM05D003686 ORTHO05D004322 2.0e-30 136.7 199 57.3
A09p02440 Brassica napus HOM05D003686 ORTHO05D004322 3.4e-30 136.0 206 51.0
BraA09t35891Z Brassica rapa HOM05D003686 ORTHO05D004322 3.4e-30 136.0 206 51.0
Nitab4.5_0001149g0030 Nicotiana tabacum HOM05D003686 ORTHO05D004322 1.7e-29 133.7 196 47.4
BolC2t10013H Brassica oleracea HOM05D003686 ORTHO05D004322 8.3e-29 131.3 97 71.1
AUR62025901 Chenopodium quinoa HOM05D003686 ORTHO05D004322 8.3e-29 131.3 191 55.5
AUR62025902 Chenopodium quinoa HOM05D003686 ORTHO05D004322 8.3e-29 131.3 191 55.5
CSS0048633 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 1.4e-28 130.6 223 46.2
Pp3c4_170 Physcomitrium patens HOM05D003686 ORTHO05D004322 1.4e-28 130.6 116 65.5
Nitab4.5_0001624g0040 Nicotiana tabacum HOM05D003686 ORTHO05D004322 2.4e-28 129.8 196 46.9
AagrBONN_evm.TU.Sc2ySwM_228.930 Anthoceros agrestis HOM05D003686 ORTHO05D004322 3.1e-28 129.4 63 93.7
COL.COLO4_34092 Corchorus olitorius HOM05D003686 ORTHO05D004322 3.1e-28 129.4 105 68.6
MSTRG.12592 Avicennia marina HOM05D003686 ORTHO05D004322 4.1e-28 129.0 131 68.7
Migut.N02118 Erythranthe guttata HOM05D003686 ORTHO05D004322 4.1e-28 129.0 106 64.2
Migut.O00643 Erythranthe guttata HOM05D003686 ORTHO05D004322 4.1e-28 129.0 106 64.2
Pp3c12_26180 Physcomitrium patens HOM05D003686 ORTHO05D004322 5.4e-28 128.6 116 64.7
SGA_v2.0_scaffold172G39059 Striga asiatica HOM05D003686 ORTHO05D004322 2.0e-27 126.7 222 42.8
SalBow6G6913 Salvia bowleyana HOM05D003686 ORTHO05D004322 2.7e-27 126.3 209 50.2
EL10Ac2g03326 Beta vulgaris HOM05D003686 ORTHO05D004322 3.5e-27 125.9 190 49.5
Lj2P1184T34 Lonicera japonica HOM05D003686 ORTHO05D004322 3.5e-27 125.9 197 44.7
BraA02t07500Z Brassica rapa HOM05D003686 ORTHO05D004322 5.9e-27 125.2 120 62.5
Oeu022800.1 Olea europaea HOM05D003686 ORTHO05D004322 5.9e-27 125.2 99 69.7
Oeu022802.1 Olea europaea HOM05D003686 ORTHO05D004322 5.9e-27 125.2 99 69.7
SGA_v2.0_scaffold36G14363 Striga asiatica HOM05D003686 ORTHO05D004322 1.0e-26 124.4 203 44.8
Mapoly0087s0074 Marchantia polymorpha HOM05D003686 ORTHO05D004322 2.9e-26 122.9 214 43.5
BcaC03g16209 Brassica carinata HOM05D003686 ORTHO05D004322 1.1e-25 120.9 208 51.0
SalBow8G5349 Salvia bowleyana HOM05D003686 ORTHO05D004322 1.1e-25 120.9 98 70.4
unitig_61.g26148 Utricularia gibba HOM05D003686 ORTHO05D004322 1.5e-25 120.6 171 49.7
Lj3A810T51 Lonicera japonica HOM05D003686 ORTHO05D004322 3.3e-25 119.4 177 54.2
Psat3g182400 Pisum sativum HOM05D003686 ORTHO05D004322 5.6e-25 118.6 74 78.4
A02p25120 Brassica napus HOM05D003686 ORTHO05D004322 4.7e-24 115.5 199 52.8
Psat0s3642g0040 Pisum sativum HOM05D000068 ORTHO05D025728 4.7e-24 115.5 62 88.7
HPP92_021468 Vanilla planifolia HOM05D003686 ORTHO05D004322 1.4e-23 114.0 56 96.4
CSS0007511 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 3.0e-23 112.8 87 69.0
CSS0037271 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 3.0e-23 112.8 87 69.0
HPP92_021461 Vanilla planifolia HOM05D003686 ORTHO05D004322 4.0e-23 112.5 169 47.3
vmacro02511 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.2e-22 110.9 189 56.1
vmacro14959 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 7.5e-22 108.2 210 39.0
SGA_v2.0_scaffold89G27564 Striga asiatica HOM05D003686 ORTHO05D004322 1.3e-21 107.5 241 44.8
C09p02540 Brassica napus HOM05D003686 ORTHO05D004322 1.4e-20 104.0 191 48.2
unitig_22.g6331 Utricularia gibba HOM05D003686 ORTHO05D004322 2.3e-18 96.7 129 46.5
Hund24902 Selenicereus undatus HOM05D003686 ORTHO05D004322 8.6e-18 94.7 113 52.2
vmacro14957 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 3.6e-16 89.4 184 41.3
Peaxi162Scf01067g00002 Petunia axillaris HOM05D003686 ORTHO05D004322 6.2e-16 88.6 107 51.4
Peaxi162Scf00936g00218 Petunia axillaris HOM05D003686 ORTHO05D004322 1.8e-15 87.0 209 37.8
Duzib211G0369 Durio zibethinus HOM05D003686 ORTHO05D004322 4.0e-15 85.9 73 67.1
Cre09.g401300 Chlamydomonas reinhardtii HOM05D003686 ORTHO05D004322 4.4e-14 82.4 41 82.9
QL07p015856 Quercus lobata HOM05D003686 ORTHO05D004322 7.5e-14 81.6 197 36.5
QL93p0358_0018 Quercus lobata HOM05D003686 ORTHO05D004322 3.7e-13 79.3 197 36.0
Lj5g0025755 Lotus japonicus HOM05D003686 ORTHO05D009933 4.1e-12 75.9 66 63.6
Lj5g0006065 Lotus japonicus HOM05D003686 ORTHO05D004322 2.3e-10 70.1 129 40.3
PSO384G1636 Papaver somniferum HOM05D000185 ORTHO05D000105 5.0e-10 68.9 184 35.9
PSO384G1591 Papaver somniferum HOM05D000185 ORTHO05D000105 6.6e-10 68.6 184 35.9
PRCOL_00005459 Prasinoderma coloniale HOM05D003686 ORTHO05D004322 3.6e-08 62.8 41 65.9


User provided reference genes

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