Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.KFTR8M Arachis hypogaea HOM05D006329 ORTHO05D008357 1.9e-226 788.9 414 100.0
arahy.Tifrunner.gnm1.ann1.21BGD2 Arachis hypogaea HOM05D006329 ORTHO05D008357 1.9e-205 719.2 414 93.0
Glyma.10G207800 Glycine max HOM05D006329 ORTHO05D008357 8.5e-158 560.8 420 72.4
Phvul.007G098900 Phaseolus vulgaris HOM05D006329 ORTHO05D008357 1.3e-153 547.0 417 72.2
TPR.G10288 Trifolium pratense HOM05D006329 ORTHO05D008357 3.7e-153 545.4 416 72.4
Ca_10544_v3 Cicer arietinum L. HOM05D006329 ORTHO05D008357 1.4e-152 543.5 416 72.4
Medtr1g094190 Medicago truncatula HOM05D006329 ORTHO05D008357 1.9e-149 533.1 416 71.4
Lj5g0015116 Lotus japonicus HOM05D006329 ORTHO05D008357 3.0e-147 525.8 427 70.0
Psat6g180040 Pisum sativum HOM05D006329 ORTHO05D008357 5.7e-146 521.5 411 68.9
Lalb_Chr21g0313671 Lupinus albus HOM05D006329 ORTHO05D008357 3.1e-144 515.8 434 66.6
Atru.chr12.838 Acer truncatum HOM05D003507 ORTHO05D008357 4.5e-143 511.9 386 67.9
MD07G1170000 Malus domestica HOM05D006329 ORTHO05D008357 2.2e-142 509.6 412 67.7
QL08p054507 Quercus lobata HOM05D006329 ORTHO05D008357 1.9e-141 506.5 411 69.3
Sed0004104 Sechium edule HOM05D006329 ORTHO05D008357 1.6e-140 503.4 412 64.8
QL08p054383 Quercus lobata HOM05D006329 ORTHO05D008357 2.1e-140 503.1 411 68.9
Nitab4.5_0001659g0150 Nicotiana tabacum HOM05D006329 ORTHO05D008357 4.7e-140 501.9 421 64.8
Duzib114G0755 Durio zibethinus HOM05D006329 ORTHO05D008357 3.0e-139 499.2 424 65.6
Nitab4.5_0001450g0040 Nicotiana tabacum HOM05D006329 ORTHO05D008357 1.5e-138 496.9 421 63.9
PGR142G3823 Punica granatum HOM05D006329 ORTHO05D008357 1.3e-137 493.8 417 66.4
Actinidia34805 Actinidia chinensis HOM05D006329 ORTHO05D008357 2.8e-137 492.7 410 65.1
PGSC0003DMG400007434 Solanum tuberosum HOM05D006329 ORTHO05D008357 2.8e-137 492.7 430 65.6
Thecc.10G083200 Theobroma cacao HOM05D006329 ORTHO05D008357 3.7e-137 492.3 387 66.4
Solyc11g008360.3 Solanum lycopersicum HOM05D006329 ORTHO05D008357 6.3e-137 491.5 431 65.7
Manes.05G201000 Manihot esculenta HOM05D006329 ORTHO05D008357 8.3e-137 491.1 432 62.5
MELO3C019822.2 Cucumis melo HOM05D006329 ORTHO05D008357 1.4e-136 490.3 409 65.5
Potri.008G035500 Populus trichocarpa HOM05D006329 ORTHO05D008357 2.4e-136 489.6 410 64.1
Sabra08G0023700 Salix brachista HOM05D006329 ORTHO05D008357 4.1e-136 488.8 414 63.5
THA.LOC104824234 Tarenaya hassleriana HOM05D006329 ORTHO05D008357 4.1e-136 488.8 414 63.3
CsaV3_6G036680 Cucumis sativus L. HOM05D006329 ORTHO05D008357 1.2e-135 487.3 413 64.9
RcHm_v2.0_Chr1g0362601 Rosa chinensis HOM05D006329 ORTHO05D008357 1.2e-135 487.3 413 63.9
Prupe.2G208900 Prunus persica HOM05D006329 ORTHO05D008357 2.0e-135 486.5 407 66.3
COL.COLO4_17136 Corchorus olitorius HOM05D006329 ORTHO05D008357 3.5e-135 485.7 382 66.8
Thhalv10016747m.g Eutrema salsugineum HOM05D006329 ORTHO05D008357 4.5e-135 485.3 425 61.9
FvH4_7g18810 Fragaria vesca HOM05D006329 ORTHO05D008357 5.9e-135 485.0 409 65.3
Ciclev10031516m.g Citrus clementina HOM05D006329 ORTHO05D008357 1.7e-134 483.4 391 65.0
Cc02_g10940 Coffea canephora HOM05D006329 ORTHO05D008357 2.9e-134 482.6 425 62.8
FAN10G3782 Fragaria x ananassa HOM05D006329 ORTHO05D008357 3.8e-134 482.3 410 63.9
BcaB02g09141 Brassica carinata HOM05D006329 ORTHO05D008357 5.0e-134 481.9 416 62.0
Gohir.D10G211400 Gossypium hirsutum HOM05D006329 ORTHO05D008357 6.6e-134 481.5 398 64.1
Gorai.011G237100 Gossypium raimondii HOM05D006329 ORTHO05D008357 6.6e-134 481.5 398 64.1
Gohir.A10G203300 Gossypium hirsutum HOM05D006329 ORTHO05D008357 1.5e-133 480.3 398 63.8
FAN06G3910 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.5e-133 479.6 409 64.5
CiPaw.01G268700 Carya illinoinensis HOM05D006329 ORTHO05D008357 1.8e-131 473.4 339 69.9
FAN10G0068 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.3e-131 473.0 409 62.3
Hma1.2p1_2894F.1_g329960 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 5.2e-131 471.9 415 61.7
VMungo0251G3605 Vigna mungo HOM05D006329 ORTHO05D008357 1.5e-130 470.3 333 72.7
AL4G36440 Arabidopsis lyrata HOM05D006329 ORTHO05D008357 2.0e-130 469.9 442 58.1
Nn6g35280 Nelumbo nucifera HOM05D006329 ORTHO05D008357 2.6e-130 469.5 392 64.3
Aqoxy1G01144 Aquilegia oxysepala HOM05D006329 ORTHO05D008357 3.4e-130 469.2 421 61.0
AT2G39140 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 4.4e-130 468.8 438 58.4
Eucgr.G02867 Eucalyptus grandis HOM05D006329 ORTHO05D008357 5.7e-130 468.4 339 69.9
Sp4g21490 Schrenkiella parvula HOM05D006329 ORTHO05D008357 7.5e-130 468.0 426 59.2
TAR623G1379 Trochodendron aralioides HOM05D006329 ORTHO05D008357 7.5e-130 468.0 418 61.7
ClCG08G007690 Citrullus lanatus HOM05D006329 ORTHO05D008357 9.8e-130 467.6 372 69.4
CARHR133910 Cardamine hirsuta HOM05D006329 ORTHO05D008357 1.7e-129 466.8 428 58.6
SalBow6G7241 Salvia bowleyana HOM05D006329 ORTHO05D008357 2.9e-129 466.1 413 61.0
MSTRG.389 Avicennia marina HOM05D006329 ORTHO05D008357 1.8e-128 463.4 414 61.1
CANSAT56G2601 Cannabis sativa HOM05D006329 ORTHO05D008357 2.4e-128 463.0 388 65.7
Migut.F01702 Erythranthe guttata HOM05D006329 ORTHO05D008357 1.6e-127 460.3 412 61.4
PSO063G6532 Papaver somniferum HOM05D006329 ORTHO05D008357 2.7e-127 459.5 400 61.8
Haze_16856 Corylus avellana HOM05D006329 ORTHO05D008357 4.6e-127 458.8 351 67.0
FAN06G0494 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.0e-126 457.6 414 62.3
Carub.0004s2119 Capsella rubella HOM05D006329 ORTHO05D008357 8.6e-126 454.5 431 58.0
PSO339G5012 Papaver somniferum HOM05D006329 ORTHO05D008357 1.1e-125 454.1 425 59.3
MBI18_g02633_MAGBIO Magnolia biondii HOM05D006329 ORTHO05D008357 1.9e-125 453.4 391 62.1
BraA05t19681Z Brassica rapa HOM05D006329 ORTHO05D008357 3.3e-125 452.6 423 58.6
Cpa.g.sc53.128 Carica papaya HOM05D006329 ORTHO05D008357 3.3e-125 452.6 364 65.1
A05p07160 Brassica napus HOM05D006329 ORTHO05D008357 5.6e-125 451.8 423 58.6
Sopen11g004170 Solanum pennellii HOM05D006329 ORTHO05D008357 1.8e-123 446.8 310 72.9
Peaxi162Scf00145g01311 Petunia axillaris HOM05D006329 ORTHO05D008357 4.0e-123 445.7 382 64.9
CDE03G0204 Ceratophyllum demersum HOM05D006329 ORTHO05D008357 1.5e-122 443.7 399 59.6
Oeu013841.1 Olea europaea HOM05D006329 ORTHO05D008357 2.0e-122 443.4 402 61.9
BcaC02g12042 Brassica carinata HOM05D006329 ORTHO05D008357 7.5e-122 441.4 348 64.4
C04p08570 Brassica napus HOM05D006329 ORTHO05D008357 7.5e-122 441.4 348 64.4
BolC4t22452H Brassica oleracea HOM05D006329 ORTHO05D008357 1.6e-119 433.7 421 59.1
GSVIVG01016221001 Vitis vinifera HOM05D006329 ORTHO05D008357 4.6e-119 432.2 307 71.0
HanXRQChr14g0456591 Helianthus annuus HOM05D006329 ORTHO05D008357 1.0e-118 431.0 332 66.9
SGA_v2.0_scaffold51G18714 Striga asiatica HOM05D006329 ORTHO05D008357 1.1e-117 427.6 398 59.8
Ah.02g128110 Amaranthus hybridus HOM05D006329 ORTHO05D008357 2.5e-117 426.4 417 58.3
FAN03G2323 Fragaria x ananassa HOM05D003507 ORTHO05D004324 2.5e-117 426.4 317 68.5
Rhsim09G0148200 Rhododendron simsii HOM05D000461 ORTHO05D001829 5.6e-117 425.2 432 57.2
EL10Ac6g14260 Beta vulgaris HOM05D006329 ORTHO05D008357 1.6e-116 423.7 315 67.6
Lsat_1_v5_gn_2_113040 Lactuca sativa HOM05D006329 ORTHO05D008357 1.1e-115 421.0 315 67.6
Zm00001eb004240 Zea mays HOM05D006329 ORTHO05D008357 7.5e-114 414.8 425 55.5
DCAR_005490 Daucus carota HOM05D006329 ORTHO05D008357 9.8e-114 414.5 384 61.7
ATR0219G015 Amborella trichopoda HOM05D006329 ORTHO05D008357 8.3e-113 411.4 363 59.5
EL10Ac4g09587 Beta vulgaris HOM05D006329 ORTHO05D008357 7.1e-112 408.3 340 63.8
Cfa001679 Carpinus fangiana HOM05D006329 ORTHO05D008357 2.1e-111 406.8 293 69.6
CAN.G321.64 Capsicum annuum HOM05D006329 ORTHO05D008357 3.5e-111 406.0 265 74.7
HPP92_026018 Vanilla planifolia HOM05D006329 ORTHO05D008357 3.0e-110 402.9 389 57.3
CSS0005771 Camellia sinensis var. sinensis HOM05D006329 ORTHO05D008357 1.5e-109 400.6 419 55.8
ECA238G1295 Erigeron canadensis HOM05D006329 ORTHO05D001676 3.3e-109 399.4 258 74.0
vmacro04842 Vaccinium macrocarpon HOM05D006329 ORTHO05D008357 1.6e-108 397.1 436 54.1
Hund20700 Selenicereus undatus HOM05D006329 ORTHO05D008357 2.0e-106 390.2 490 48.6
HPP92_027741 Vanilla planifolia HOM05D006329 ORTHO05D008357 1.1e-104 384.4 314 65.6
Dinv31231 Davidia involucrata HOM05D006329 ORTHO05D008357 2.5e-101 373.2 333 62.8
Lalb_Chr21g0313541 Lupinus albus HOM05D006329 ORTHO05D008357 1.4e-99 367.5 220 81.4
Lj3A938T44 Lonicera japonica HOM05D006329 ORTHO05D008357 8.9e-99 364.8 393 56.5
AUR62002759 Chenopodium quinoa HOM05D006329 ORTHO05D008357 9.9e-98 361.3 377 55.7
RhsimUnG0185600 Rhododendron simsii HOM05D000461 ORTHO05D001829 5.4e-96 355.5 396 54.5
Os03g0152700 Oryza sativa ssp. japonica HOM05D006329 ORTHO05D008357 1.6e-95 354.0 354 57.6
Aa31LG5G20460 Aethionema arabicum HOM05D006329 ORTHO05D008357 2.7e-87 326.6 380 51.8
Mapoly0002s0007 Marchantia polymorpha HOM05D006329 ORTHO05D008357 1.3e-86 324.3 271 59.8
Pp3c7_13640 Physcomitrium patens HOM05D006329 ORTHO05D008357 4.5e-82 309.3 336 51.8
Cfa001678 Carpinus fangiana HOM05D006329 ORTHO05D008357 6.4e-81 305.4 230 68.3
SMO329G0071 Selaginella moellendorffii HOM05D006329 ORTHO05D008357 1.1e-80 304.7 261 59.4
Sc09g0006060 Simmondsia chinensis HOM05D006329 ORTHO05D008357 1.6e-68 264.2 308 52.3
FAN01G2166 Fragaria x ananassa HOM05D006329 ORTHO05D008357 3.2e-64 250.0 200 66.0
HPP92_026744 Vanilla planifolia HOM05D006329 ORTHO05D008357 5.7e-61 239.2 263 54.4
CBR_g29624 Chara braunii HOM05D006329 ORTHO05D008357 3.1e-51 206.8 172 60.5
MCO14G528 Micromonas commoda HOM05D006329 ORTHO05D008357 2.6e-50 203.8 266 43.2
Cre02.g095121 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 4.7e-47 193.0 336 37.8
AUR62014125 Chenopodium quinoa HOM05D006329 ORTHO05D008357 2.3e-46 190.7 159 62.9
PRCOL_00004574 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 4.5e-42 176.4 263 38.8
Hma1.2p1_2894F.1_g329970 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 1.0e-30 138.7 82 75.6
CAN.G176.13 Capsicum annuum HOM05D006329 ORTHO05D033978 5.2e-30 136.3 83 74.7
Pp3s196_90 Physcomitrium patens HOM05D006329 ORTHO05D008357 9.1e-27 125.6 257 30.7
AT3G43340 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 8.8e-22 109.0 74 68.9
Hma1.2p1_2894F.1_g329973 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 3.1e-19 100.5 57 77.2
Cre07.g323550 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 3.3e-16 90.5 257 26.8
Glyma.20G182966 Glycine max HOM05D006329 ORTHO05D028485 6.1e-15 86.3 81 56.8
Lalb_Chr21g0313531 Lupinus albus HOM05D006329 ORTHO05D008357 5.7e-13 79.7 102 47.1
MCO04G216 Micromonas commoda HOM05D006329 ORTHO05D008357 2.2e-12 77.8 270 26.3
CAN.G184.4 Capsicum annuum HOM05D006329 ORTHO05D028485 1.2e-10 72.0 53 60.4
Potri.010G226901 Populus trichocarpa HOM05D006329 ORTHO05D028485 1.7e-09 68.2 51 66.7


User provided reference genes

Program Settings