Gene: FAN03G2323
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN03G2323
- Transcript Identifier FAN03G2323.1
- Gene Type Coding gene
- Location Fvb7-3 : 8877804-8884590 : positive
Gene Family Information
- ID HOM05D003507
- #Genes/#Species 194/95
- Phylogenetic origin
- ID ORTHO05D004324
- #Genes/#Species 184/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id maker-Fvb7-3-snap-gene-88.38.v1.0.a1
- pacid 50480764
Descriptions
- Description 1.1.5.3//1.1.99.5 - Glycerol-3-phosphate dehydrogenase / sn-glycerol-3-phosphate dehydrogenase // Transferred entry: 1.1.5.3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0001522 | IEA | InterPro | pseudouridine synthesis | |
| GO:0009451 | IEA | InterPro | RNA modification | |
| GO:0006072 | IEA | InterPro | glycerol-3-phosphate metabolic process | |
| GO:0019563 | ISO | PLAZA Integrative Orthology | glycerol catabolic process | AT3G10370 |
| GO:0006127 | ISO | PLAZA Integrative Orthology | glycerophosphate shuttle | AT3G10370 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0009982 | IEA | InterPro | pseudouridine synthase activity | |
| GO:0004368 | IEA | InterPro | glycerol-3-phosphate dehydrogenase (quinone) activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009331 | IEA | InterPro | glycerol-3-phosphate dehydrogenase complex | |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT3G10370 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR031656 | Alpha-glycerophosphate oxidase, C-terminal |
| IPR020103 | Pseudouridine synthase, catalytic domain superfamily |
| IPR002942 | RNA-binding S4 domain |
| IPR036188 | FAD/NAD(P)-binding domain superfamily |
| IPR006145 | Pseudouridine synthase, RsuA/RluA-like |
| IPR042092 | Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain |
| IPR020094 | Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal |
| IPR036986 | RNA-binding S4 domain superfamily |
| IPR038299 | Alpha-glycerophosphate oxidase, C-terminal domain superfamily |
| IPR000447 | FAD-dependent glycerol-3-phosphate dehydrogenase |
| IPR006076 | FAD dependent oxidoreductase |
| Mapman id | Description |
|---|---|
| 17.1.1.2.2.2 | Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.pseudouridylation.rRNA pseudouridine synthase (RsuA) |
| 5.7.4.4 | Lipid metabolism.lipid degradation.glycerol metabolism.FAD-dependent glycerol-3-phosphate dehydrogenase |