Gene: AUR62014125

General Information

Structural Information

Species Chenopodium quinoa
Gene Identifier AUR62014125
Transcript Identifier AUR62014125-RA
Gene Type Coding gene
Location C_Quinoa_Scaffold_3035 : 4676672-4687918 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D006329
#Genes/#Species 126/93
Phylogenetic origin

ID ORTHO05D008357
#Genes/#Species 120/93
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id AUR62014125.v1.0
pacid 36308992
uniprot A0A803LJH8

Descriptions

Short descriptions
Ortholog descriptions

Description Mb1738: Uncharacterized RNA pseudouridine synthase Mb1738

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0001522	ISO	PLAZA Homology (enrichment)	pseudouridine synthesis	HOM05D006329
GO:0009451	ISO	PLAZA Homology (enrichment)	RNA modification	HOM05D006329
GO:0000489	ISO	PLAZA Integrative Orthology	maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	AT2G39140
GO:0000488	ISO	PLAZA Integrative Orthology	maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	AT2G39140
GO:0032544	ISO	PLAZA Integrative Orthology	plastid translation	AT2G39140

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003723	IEA	GOA Database	RNA binding
GO:0003723	IEA	InterPro	RNA binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT2G39140
GO:0009982	ISO	PLAZA Integrative Orthology	pseudouridine synthase activity	AT2G39140

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT2G39140
GO:0009501	ISO	PLAZA Integrative Orthology	amyloplast	AT2G39140
GO:0009536	ISO	PLAZA Integrative Orthology	plastid	AT2G39140

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002942	RNA-binding S4 domain
IPR036986	RNA-binding S4 domain superfamily

Mapman id	Description
17.1.1.2.2.2	Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.pseudouridylation.rRNA pseudouridine synthase (RsuA)