Gene: CAN.G176.13
General Information
Structural Information
- Species Capsicum annuum
- Gene Identifier CAN.G176.13
- Transcript Identifier CAN.T176.13
- Gene Type Coding gene
- Location PGAv.1.6.scaffold176 : 2302257-2325657 : negative
Gene Family Information
- ID HOM05D006329
- #Genes/#Species 126/93
- Phylogenetic origin
- ID ORTHO05D033978
- #Genes/#Species 3/2
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id CA.PGAv.1.6.scaffold176.13
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005992 | IEA | InterPro | trehalose biosynthetic process | |
| GO:0001522 | IEA | InterPro | pseudouridine synthesis | |
| GO:0009451 | IEA | InterPro | RNA modification |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0009982 | IEA | InterPro | pseudouridine synthase activity | |
| GO:0003824 | IEA | InterPro | catalytic activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR020094 | Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal |
| IPR036412 | HAD-like superfamily |
| IPR003337 | Trehalose-phosphatase |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001830 | Glycosyl transferase, family 20 |
| IPR020103 | Pseudouridine synthase, catalytic domain superfamily |
| IPR023214 | HAD superfamily |
| Mapman id | Description |
|---|---|
| 17.1.1.2.2.2 | Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.pseudouridylation.rRNA pseudouridine synthase (RsuA) |