Gene: FAN06G3910
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN06G3910
- Transcript Identifier FAN06G3910.1
- Gene Type Coding gene
- Location Fvb7-2 : 14277247-14280588 : negative
Gene Family Information
- ID HOM05D006329
- #Genes/#Species 126/93
- Phylogenetic origin
- ID ORTHO05D008357
- #Genes/#Species 120/93
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id maker-Fvb7-2-augustus-gene-142.54.v1.0.a1
- pacid 50493515
Descriptions
- Description 5.4.99.22 - 23S rRNA pseudouridine(2605) synthase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0001522 | IEA | InterPro | pseudouridine synthesis | |
| GO:0009451 | IEA | InterPro | RNA modification |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0009982 | IEA | InterPro | pseudouridine synthase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR042092 | Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain |
| IPR006145 | Pseudouridine synthase, RsuA/RluA-like |
| IPR002942 | RNA-binding S4 domain |
| IPR036986 | RNA-binding S4 domain superfamily |
| IPR020094 | Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal |
| IPR020103 | Pseudouridine synthase, catalytic domain superfamily |
| Mapman id | Description |
|---|---|
| 17.1.1.2.2.2 | Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.pseudouridylation.rRNA pseudouridine synthase (RsuA) |