Gene: arahy.Tifrunner.gnm1.ann1.KFTR8M

General Information

Structural Information

Species Arachis hypogaea
Gene Identifier arahy.Tifrunner.gnm1.ann1.KFTR8M
Transcript Identifier arahy.Tifrunner.gnm1.ann1.KFTR8M.1
Gene Type Coding gene
Location arahy.Tifrunner.gnm1.Arahy.19 : 143598714-143602758 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D006329
#Genes/#Species 126/93
Phylogenetic origin

ID ORTHO05D008357
#Genes/#Species 120/93
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id arahy.Tifrunner.gnm1.ann1.KFTR8M.v1.0
pacid 42602522

Descriptions

Short descriptions
Ortholog descriptions

Description 5.4.99.22 - 23S rRNA pseudouridine(2605) synthase

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0001522	IEA	InterPro	pseudouridine synthesis
GO:0009451	IEA	InterPro	RNA modification
GO:0000489	ISO	PLAZA Integrative Orthology	maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	AT2G39140
GO:0000488	ISO	PLAZA Integrative Orthology	maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	AT2G39140
GO:0032544	ISO	PLAZA Integrative Orthology	plastid translation	AT2G39140

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003723	IEA	InterPro	RNA binding
GO:0009982	IEA	InterPro	pseudouridine synthase activity
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT2G39140

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT2G39140
GO:0009501	ISO	PLAZA Integrative Orthology	amyloplast	AT2G39140
GO:0009536	ISO	PLAZA Integrative Orthology	plastid	AT2G39140

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR042092	Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain
IPR006145	Pseudouridine synthase, RsuA/RluA-like
IPR002942	RNA-binding S4 domain
IPR036986	RNA-binding S4 domain superfamily
IPR020103	Pseudouridine synthase, catalytic domain superfamily
IPR020094	Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal

Mapman id	Description
17.1.1.2.2.2	Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.pseudouridylation.rRNA pseudouridine synthase (RsuA)