Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.0C9QHL Arachis hypogaea HOM05D003850 ORTHO05D004515 4.6e-252 874.4 547 100.0
arahy.Tifrunner.gnm1.ann1.97WSNQ Arachis hypogaea HOM05D003850 ORTHO05D004515 4.8e-233 811.2 556 92.1
Ca_00718_v3 Cicer arietinum L. HOM05D003850 ORTHO05D004515 3.2e-189 665.6 556 72.5
Glyma.09G009900 Glycine max HOM05D003850 ORTHO05D004515 4.2e-189 665.2 556 76.1
Phvul.006G143600 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 1.4e-184 650.2 556 72.1
arahy.Tifrunner.gnm1.ann1.C17RPB Arachis hypogaea HOM05D003850 ORTHO05D004515 2.9e-182 642.5 554 71.1
VMungo1215G3075 Vigna mungo HOM05D003850 ORTHO05D004515 2.9e-182 642.5 556 76.4
arahy.Tifrunner.gnm1.ann1.IIR6TV Arachis hypogaea HOM05D003850 ORTHO05D004515 1.5e-181 640.2 556 71.2
VMungo0540G1287 Vigna mungo HOM05D003850 ORTHO05D004515 8.0e-180 634.4 556 70.9
Phvul.003G083500 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 4.5e-175 618.6 556 74.3
TPR.G3343 Trifolium pratense HOM05D003850 ORTHO05D004515 1.7e-174 616.7 577 69.3
CANSAT56G0590 Cannabis sativa HOM05D003850 ORTHO05D004515 3.8e-174 615.5 557 68.4
QL05p069776 Quercus lobata HOM05D003850 ORTHO05D004515 2.5e-173 612.8 556 70.3
Ciclev10014841m.g Citrus clementina HOM05D003850 ORTHO05D004515 1.8e-171 606.7 558 71.3
Medtr2g025590 Medicago truncatula HOM05D003850 ORTHO05D004515 6.8e-171 604.7 555 73.9
CSS0007684 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 1.2e-170 604.0 558 70.6
CSS0032808 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 1.5e-170 603.6 558 68.1
Nn1g03331 Nelumbo nucifera HOM05D003850 ORTHO05D004515 2.0e-170 603.2 559 69.9
TAR624G0821 Trochodendron aralioides HOM05D003850 ORTHO05D004515 6.4e-169 598.2 558 70.4
Lalb_Chr20g0119201 Lupinus albus HOM05D003850 ORTHO05D004515 8.3e-169 597.8 556 67.3
Atru.chr1.2461 Acer truncatum HOM05D003850 ORTHO05D004515 2.1e-164 583.2 558 68.8
CiPaw.09G102000 Carya illinoinensis HOM05D003850 ORTHO05D004515 4.0e-163 578.9 557 71.1
Glyma.15G114200 Glycine max HOM05D003850 ORTHO05D004515 1.2e-162 577.4 556 66.0
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 2.6e-162 576.2 557 69.8
Potri.006G009100 Populus trichocarpa HOM05D003850 ORTHO05D004515 3.4e-162 575.9 556 69.1
MSTRG.7170 Avicennia marina HOM05D003850 ORTHO05D004515 3.7e-161 572.4 558 69.2
TAR629G2665 Trochodendron aralioides HOM05D003850 ORTHO05D004515 5.4e-160 568.5 554 68.4
Sed0003006 Sechium edule HOM05D003850 ORTHO05D004515 7.0e-160 568.2 553 66.0
Eucgr.E03951 Eucalyptus grandis HOM05D003850 ORTHO05D004515 2.0e-159 566.6 562 68.5
Aqoxy1G04110 Aquilegia oxysepala HOM05D003850 ORTHO05D004515 4.6e-159 565.5 560 62.9
GSVIVG01003352001 Vitis vinifera HOM05D003850 ORTHO05D004515 8.6e-158 561.2 558 69.9
Duzib160G0220 Durio zibethinus HOM05D003850 ORTHO05D004515 3.3e-157 559.3 563 66.6
Prupe.4G011300 Prunus persica HOM05D003850 ORTHO05D004515 1.8e-155 553.5 557 65.0
Nitab4.5_0001198g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 1.2e-154 550.8 550 63.8
RhsimUnG0025700 Rhododendron simsii HOM05D003850 ORTHO05D004515 2.6e-154 549.7 595 64.4
RhsimUnG0028500 Rhododendron simsii HOM05D003850 ORTHO05D004515 2.6e-154 549.7 595 64.4
Sopen11g006940 Solanum pennellii HOM05D003850 ORTHO05D004515 2.6e-154 549.7 556 62.9
THA.LOC104812992 Tarenaya hassleriana HOM05D003850 ORTHO05D004515 1.7e-153 547.0 557 62.5
Migut.M01390 Erythranthe guttata HOM05D003850 ORTHO05D004515 2.2e-153 546.6 555 60.9
Thecc.06G232700 Theobroma cacao HOM05D003850 ORTHO05D004515 6.4e-153 545.0 563 67.0
MBI16_g42266_MAGBIO Magnolia biondii HOM05D003850 ORTHO05D004515 1.2e-151 540.8 559 66.7
PGR102G0753 Punica granatum HOM05D003850 ORTHO05D004515 6.6e-150 535.0 559 68.0
PSO210G4264 Papaver somniferum HOM05D003850 ORTHO05D004515 1.9e-149 533.5 567 63.5
SalBow8G5272 Salvia bowleyana HOM05D003850 ORTHO05D004515 3.3e-149 532.7 570 66.1
Gohir.A06G153120 Gossypium hirsutum HOM05D003850 ORTHO05D004515 4.3e-149 532.3 561 70.2
Cc09_g00920 Coffea canephora HOM05D003850 ORTHO05D004515 5.6e-149 531.9 559 69.2
ECA233G3046 Erigeron canadensis HOM05D003850 ORTHO05D004515 5.6e-149 531.9 559 68.9
CsaV3_3G028740 Cucumis sativus L. HOM05D003850 ORTHO05D004515 6.2e-148 528.5 553 63.7
Gorai.010G186300 Gossypium raimondii HOM05D003850 ORTHO05D004515 8.1e-148 528.1 561 70.6
Lj4g0025543 Lotus japonicus HOM05D003850 ORTHO05D004515 5.2e-147 525.4 556 63.3
Lj6g0013016 Lotus japonicus HOM05D003850 ORTHO05D004515 6.8e-147 525.0 558 69.9
SGA_v2.0_scaffold4G01878 Striga asiatica HOM05D003850 ORTHO05D004515 6.8e-147 525.0 541 68.0
Oeu002760.2 Olea europaea HOM05D003850 ORTHO05D004515 1.2e-146 524.2 593 63.9
Potri.016G015100 Populus trichocarpa HOM05D003850 ORTHO05D004515 2.0e-146 523.5 557 64.6
vmacro15772 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 3.8e-145 519.2 572 68.0
Gohir.D06G159600 Gossypium hirsutum HOM05D003850 ORTHO05D004515 1.9e-144 516.9 561 69.9
Nitab4.5_0000143g0310 Nicotiana tabacum HOM05D003850 ORTHO05D004515 7.1e-144 515.0 553 61.3
Manes.07G088900 Manihot esculenta HOM05D003850 ORTHO05D004515 3.5e-143 512.7 553 64.0
ClCG07G001740 Citrullus lanatus HOM05D003850 ORTHO05D004515 4.6e-143 512.3 554 63.2
AL6G47570 Arabidopsis lyrata HOM05D003850 ORTHO05D004515 1.7e-142 510.4 567 66.1
MD05G1357300 Malus domestica HOM05D003850 ORTHO05D004515 1.1e-141 507.7 562 62.8
COL.COLO4_31876 Corchorus olitorius HOM05D003850 ORTHO05D004515 9.6e-141 504.6 562 63.5
Aa31LG9G10040 Aethionema arabicum HOM05D003850 ORTHO05D004515 6.2e-140 501.9 576 63.7
Sabra06G0006900 Salix brachista HOM05D003850 ORTHO05D004515 6.9e-139 498.4 560 61.6
AT4G12610 Arabidopsis thaliana HOM05D003850 ORTHO05D004515 2.6e-138 496.5 568 65.3
Cpa.g.sc75.120 Carica papaya HOM05D003850 ORTHO05D004515 2.6e-138 496.5 560 66.6
SEGI_18521 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 5.8e-138 495.4 564 62.8
Cfa000110 Carpinus fangiana HOM05D003850 ORTHO05D004515 1.7e-137 493.8 557 65.0
Haze_08659 Corylus avellana HOM05D003850 ORTHO05D004515 8.4e-137 491.5 596 60.1
ATR0751G086 Amborella trichopoda HOM05D003850 ORTHO05D004515 1.4e-136 490.7 570 59.6
PSO302G0165 Papaver somniferum HOM05D003850 ORTHO05D004515 2.4e-136 490.0 566 60.8
PGSC0003DMG400013344 Solanum tuberosum HOM05D003850 ORTHO05D004515 9.3e-136 488.0 519 62.4
TWI63G0294 Tripterygium wilfordii HOM05D003850 ORTHO05D004515 1.6e-135 487.3 520 66.7
Lj2A262G45 Lonicera japonica HOM05D003850 ORTHO05D004515 3.5e-135 486.1 527 66.8
Solyc11g012150.3 Solanum lycopersicum HOM05D003850 ORTHO05D004515 1.3e-134 484.2 519 62.0
Carub.0006s3188 Capsella rubella HOM05D003850 ORTHO05D004515 7.3e-133 478.4 558 65.1
Actinidia39269 Actinidia chinensis HOM05D003850 ORTHO05D004515 1.3e-132 477.6 361 76.2
CiPaw.10G077600 Carya illinoinensis HOM05D003850 ORTHO05D004515 2.8e-132 476.5 512 60.4
SHI24464 Sapria himalayana HOM05D003850 ORTHO05D004515 8.1e-132 474.9 540 56.7
HPP92_001629 Vanilla planifolia HOM05D003850 ORTHO05D004515 8.1e-132 474.9 555 54.2
BcaC01g04577 Brassica carinata HOM05D003850 ORTHO05D004515 4.0e-131 472.6 559 65.7
BolC3t15918H Brassica oleracea HOM05D003850 ORTHO05D004515 4.0e-131 472.6 559 65.7
Sabra16G0017100 Salix brachista HOM05D003850 ORTHO05D004515 4.0e-131 472.6 588 55.3
HanXRQChr15g0470091 Helianthus annuus HOM05D003850 ORTHO05D004515 6.9e-131 471.9 538 65.4
Peaxi162Scf00558g00516 Petunia axillaris HOM05D003850 ORTHO05D004515 6.9e-131 471.9 505 66.7
Hund23984 Selenicereus undatus HOM05D003850 ORTHO05D004515 2.0e-130 470.3 558 62.0
AUR62021872 Chenopodium quinoa HOM05D003850 ORTHO05D004515 5.8e-130 468.8 561 52.8
C03p36090 Brassica napus HOM05D003850 ORTHO05D004515 1.7e-129 467.2 559 65.5
unitig_748.g7103 Utricularia gibba HOM05D003850 ORTHO05D004515 2.2e-129 466.8 554 59.4
BraA03t12173Z Brassica rapa HOM05D003850 ORTHO05D004515 4.9e-129 465.7 559 64.9
A03p29830 Brassica napus HOM05D003850 ORTHO05D004515 9.3e-128 461.5 559 64.9
FAN25G3770 Fragaria x ananassa HOM05D003850 ORTHO05D004515 9.3e-128 461.5 601 53.7
MD10G1331000 Malus domestica HOM05D003850 ORTHO05D004515 1.6e-127 460.7 527 64.5
Sabra16G0000900 Salix brachista HOM05D003850 ORTHO05D004515 4.6e-127 459.1 566 51.6
Psat1g176560 Pisum sativum HOM05D003850 ORTHO05D004515 7.9e-127 458.4 480 69.6
PSO339G3925 Papaver somniferum HOM05D003850 ORTHO05D004515 1.0e-126 458.0 562 60.9
CARHR253560 Cardamine hirsuta HOM05D003850 ORTHO05D004515 3.9e-126 456.1 556 62.8
CAN.G1186.28 Capsicum annuum HOM05D003850 ORTHO05D004515 1.1e-125 454.5 560 55.9
FvH4_3g01042 Fragaria vesca HOM05D003850 ORTHO05D004515 2.5e-125 453.4 575 55.1
RcHm_v2.0_Chr5g0001581 Rosa chinensis HOM05D003850 ORTHO05D004515 1.5e-122 444.1 575 56.7
vmacro03646 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 4.9e-121 439.1 572 51.2
FAN21G1422 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.1e-120 438.0 592 53.0
EL10Ac8g20176 Beta vulgaris HOM05D003850 ORTHO05D004515 1.2e-119 434.5 556 60.1
Thhalv10028564m.g Eutrema salsugineum HOM05D003850 ORTHO05D004515 6.0e-119 432.2 558 60.8
BolC9t56221H Brassica oleracea HOM05D003850 ORTHO05D004515 1.9e-117 427.2 570 58.2
Sp6g04900 Schrenkiella parvula HOM05D003850 ORTHO05D004515 1.9e-117 427.2 561 60.1
BcaB01g01757 Brassica carinata HOM05D003850 ORTHO05D004515 5.6e-117 425.6 552 59.2
BcaB01g02623 Brassica carinata HOM05D003850 ORTHO05D004515 1.4e-115 421.0 545 60.4
Oeu044421.3 Olea europaea HOM05D003850 ORTHO05D004515 1.7e-113 414.1 855 41.3
Lsat_1_v5_gn_7_13561 Lactuca sativa HOM05D003850 ORTHO05D004515 8.4e-113 411.8 506 62.8
BraA09t38246Z Brassica rapa HOM05D003850 ORTHO05D004515 5.5e-112 409.1 569 55.2
RhsimUnG0109100 Rhododendron simsii HOM05D003850 ORTHO05D004515 2.7e-111 406.8 536 53.5
Medtr2g025620 Medicago truncatula HOM05D003850 ORTHO05D004515 6.7e-110 402.1 524 60.5
Lj8A171G42 Lonicera japonica HOM05D003850 ORTHO05D004515 6.3e-108 395.6 551 47.9
MELO3C012788.2 Cucumis melo HOM05D003850 ORTHO05D004515 2.6e-106 390.2 477 61.2
CDE04G2591 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 4.5e-106 389.4 559 53.3
Zm00001eb224360 Zea mays HOM05D003850 ORTHO05D004515 5.9e-106 389.0 506 56.5
A09p26740 Brassica napus HOM05D003850 ORTHO05D004515 7.2e-104 382.1 556 52.7
Rhsim13G0146600 Rhododendron simsii HOM05D003850 ORTHO05D004515 9.3e-104 381.7 590 48.6
BcaC04g21251 Brassica carinata HOM05D003850 ORTHO05D004515 7.9e-103 378.6 555 56.0
C09p33830 Brassica napus HOM05D003850 ORTHO05D004515 7.9e-103 378.6 555 56.0
RcHm_v2.0_Chr5g0007791 Rosa chinensis HOM05D003850 ORTHO05D004515 9.1e-99 365.2 566 51.9
CDE06G1774 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 1.1e-93 348.2 328 60.7
Mapoly0105s0015 Marchantia polymorpha HOM05D003850 ORTHO05D004515 9.7e-93 345.1 556 47.8
Pp3c3_2280 Physcomitrium patens HOM05D003850 ORTHO05D004515 2.8e-92 343.6 565 48.5
TPR.G13041 Trifolium pratense HOM05D003850 ORTHO05D004515 1.8e-91 340.9 379 71.2
Duzib235G1223 Durio zibethinus HOM05D003850 ORTHO05D004515 2.9e-89 333.6 404 67.8
FvH4_3g04782 Fragaria vesca HOM05D003850 ORTHO05D004515 7.2e-88 328.9 566 46.3
FAN11G3915 Fragaria x ananassa HOM05D003850 ORTHO05D004515 7.2e-88 328.9 566 46.1
FAN21G1676 Fragaria x ananassa HOM05D003850 ORTHO05D004515 7.2e-88 328.9 553 47.4
QL09p006300 Quercus lobata HOM05D003850 ORTHO05D004515 7.2e-88 328.9 377 66.6
FAN03G2951 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.6e-87 327.8 553 47.2
FAN16G3024 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.1e-87 327.4 563 46.0
Zm00001eb398520 Zea mays HOM05D003850 ORTHO05D004515 1.8e-86 324.3 559 41.3
FvH4_2g22070 Fragaria vesca HOM05D003850 ORTHO05D004515 1.3e-84 318.2 568 41.2
FAN24G0125 Fragaria x ananassa HOM05D003850 ORTHO05D008045 9.1e-83 312.0 564 41.1
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 1.6e-82 311.2 455 58.9
TPR.G34491 Trifolium pratense HOM05D003850 ORTHO05D004515 1.2e-79 301.6 195 75.9
AUR62012783 Chenopodium quinoa HOM05D003850 ORTHO05D004515 2.2e-76 290.8 440 48.4
Dinv07398 Davidia involucrata HOM05D003850 ORTHO05D004515 1.1e-75 288.5 314 72.9
AagrBONN_evm.TU.Sc2ySwM_228.4136 Anthoceros agrestis HOM05D003850 ORTHO05D004515 4.1e-75 286.6 353 53.8
SEGI_38016 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 5.9e-58 229.6 334 46.7
Peaxi162Scf00015g02110 Petunia axillaris HOM05D003850 ORTHO05D004515 4.3e-56 223.4 311 50.5
Sc17g0007710 Simmondsia chinensis HOM05D003850 ORTHO05D004515 4.7e-55 219.9 364 60.4
Actinidia11880 Actinidia chinensis HOM05D003850 ORTHO05D004515 3.0e-49 200.7 306 53.6
FAN25G2646 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.5e-48 197.6 510 37.1
HPP92_001646 Vanilla planifolia HOM05D003850 ORTHO05D004515 1.3e-44 185.3 249 55.8
Gorai.002G145900 Gossypium raimondii HOM05D003850 ORTHO05D004515 1.4e-38 165.2 178 78.1
arahy.Tifrunner.gnm1.ann1.5H9H8Z Arachis hypogaea HOM05D003850 ORTHO05D004515 1.7e-36 158.3 111 82.9
HPP92_001645 Vanilla planifolia HOM05D003850 ORTHO05D004515 1.4e-35 155.2 101 69.3
arahy.Tifrunner.gnm1.ann1.4A53N1 Arachis hypogaea HOM05D003850 ORTHO05D004515 7.1e-35 152.9 114 80.7
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 6.0e-34 149.8 178 66.3
arahy.Tifrunner.gnm1.ann1.N7GRQP Arachis hypogaea HOM05D003850 ORTHO05D004515 2.4e-27 127.9 75 89.3
arahy.Tifrunner.gnm1.ann1.UE8YUV Arachis hypogaea HOM05D003850 ORTHO05D004515 2.4e-27 127.9 75 89.3
PSO339G5270 Papaver somniferum HOM05D003850 ORTHO05D004515 2.1e-26 124.8 224 43.8
CBR_g38333 Chara braunii HOM05D000019 ORTHO05D000002 3.5e-26 124.0 250 38.8
arahy.Tifrunner.gnm1.ann1.GFC3N0 Arachis hypogaea HOM05D003850 ORTHO05D004515 1.3e-25 122.1 88 90.9
Gohir.D01G119450 Gossypium hirsutum HOM05D003850 ORTHO05D004515 8.6e-25 119.4 90 82.2
TAR629G2548 Trochodendron aralioides HOM05D003850 ORTHO05D004515 5.6e-24 116.7 306 32.4
AagrBONN_evm.TU.Sc2ySwM_228.3786 Anthoceros agrestis HOM05D003850 ORTHO05D004515 9.9e-21 105.9 136 41.9
CDE06G0619 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 1.4e-19 102.1 220 43.6
PSO384G4333 Papaver somniferum HOM05D003850 ORTHO05D004515 4.6e-18 97.1 180 41.7
Eucgr.A01650 Eucalyptus grandis HOM05D002251 ORTHO05D004515 7.8e-18 96.3 54 75.9
Lsat_1_v5_gn_3_78300 Lactuca sativa HOM05D002115 ORTHO05D002263 1.3e-15 89.0 68 67.6
RcHm_v2.0_Chr6g0288941 Rosa chinensis HOM05D003850 ORTHO05D004515 3.4e-13 80.9 273 34.8
VMungo0720G0179 Vigna mungo HOM05D003850 ORTHO05D004515 6.4e-12 76.6 42 81.0
SEGI_29277 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 1.4e-11 75.5 224 36.2
HPP92_001647 Vanilla planifolia HOM05D003850 ORTHO05D004515 5.4e-11 73.6 120 46.7
CAN.G1186.27 Capsicum annuum HOM05D001620 ORTHO05D005461 7.1e-11 73.2 59 61.0
Nitab4.5_0013082g0020 Nicotiana tabacum HOM05D003850 ORTHO05D004515 9.3e-11 72.8 69 55.1
AagrBONN_evm.TU.Sc2ySwM_228.3787 Anthoceros agrestis HOM05D003850 ORTHO05D004515 1.0e-09 69.3 254 32.7
FAN21G0780 Fragaria x ananassa HOM05D003850 ORTHO05D004515 3.0e-09 67.8 243 39.1
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 3.9e-09 67.4 72 52.8
Nitab4.5_0006771g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 1.1e-08 65.9 70 51.4
SEGI_19210 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 4.8e-07 60.5 122 31.1


User provided reference genes

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