Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G3075 Vigna mungo HOM05D003850 ORTHO05D004515 1.0e-267 926.4 540 100.0
Phvul.003G083500 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 2.5e-234 815.5 542 91.1
arahy.Tifrunner.gnm1.ann1.C17RPB Arachis hypogaea HOM05D003850 ORTHO05D004515 1.7e-203 713.0 541 75.0
QL05p069776 Quercus lobata HOM05D003850 ORTHO05D004515 1.1e-200 703.7 544 77.8
arahy.Tifrunner.gnm1.ann1.IIR6TV Arachis hypogaea HOM05D003850 ORTHO05D004515 5.8e-199 698.0 543 73.7
Phvul.006G143600 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 7.6e-199 697.6 543 74.8
Ca_00718_v3 Cicer arietinum L. HOM05D003850 ORTHO05D004515 4.2e-197 691.8 544 73.5
Glyma.09G009900 Glycine max HOM05D003850 ORTHO05D004515 2.1e-196 689.5 544 75.0
VMungo0540G1287 Vigna mungo HOM05D003850 ORTHO05D004515 2.5e-194 682.6 542 73.4
Ciclev10014841m.g Citrus clementina HOM05D003850 ORTHO05D004515 4.3e-194 681.8 545 77.2
TAR624G0821 Trochodendron aralioides HOM05D003850 ORTHO05D004515 6.2e-193 677.9 544 75.7
Nn1g03331 Nelumbo nucifera HOM05D003850 ORTHO05D004515 6.9e-192 674.5 546 75.5
CiPaw.09G102000 Carya illinoinensis HOM05D003850 ORTHO05D004515 6.4e-190 667.9 543 75.1
CANSAT56G0590 Cannabis sativa HOM05D003850 ORTHO05D004515 7.9e-188 661.0 544 70.8
arahy.Tifrunner.gnm1.ann1.97WSNQ Arachis hypogaea HOM05D003850 ORTHO05D004515 3.0e-187 659.1 555 74.8
arahy.Tifrunner.gnm1.ann1.0C9QHL Arachis hypogaea HOM05D003850 ORTHO05D004515 8.7e-187 657.5 556 76.4
Potri.006G009100 Populus trichocarpa HOM05D003850 ORTHO05D004515 1.1e-186 657.1 544 75.2
CSS0007684 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 1.5e-186 656.8 546 72.7
Atru.chr1.2461 Acer truncatum HOM05D003850 ORTHO05D004515 1.3e-185 653.7 546 73.3
CSS0032808 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 2.8e-185 652.5 545 70.1
TPR.G3343 Trifolium pratense HOM05D003850 ORTHO05D004515 2.8e-185 652.5 567 71.3
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 1.2e-183 647.1 543 75.7
Duzib160G0220 Durio zibethinus HOM05D003850 ORTHO05D004515 6.5e-182 641.3 555 70.1
MSTRG.7170 Avicennia marina HOM05D003850 ORTHO05D004515 6.0e-180 634.8 544 71.1
Medtr2g025590 Medicago truncatula HOM05D003850 ORTHO05D004515 6.0e-180 634.8 543 75.0
Eucgr.E03951 Eucalyptus grandis HOM05D003850 ORTHO05D004515 2.3e-179 632.9 549 72.7
TAR629G2665 Trochodendron aralioides HOM05D003850 ORTHO05D004515 2.8e-177 625.9 541 72.3
Sed0003006 Sechium edule HOM05D003850 ORTHO05D004515 6.3e-177 624.8 543 70.2
Lalb_Chr20g0119201 Lupinus albus HOM05D003850 ORTHO05D004515 8.2e-177 624.4 544 68.2
Thecc.06G232700 Theobroma cacao HOM05D003850 ORTHO05D004515 1.4e-176 623.6 555 68.5
Glyma.15G114200 Glycine max HOM05D003850 ORTHO05D004515 4.1e-176 622.1 543 68.9
GSVIVG01003352001 Vitis vinifera HOM05D003850 ORTHO05D004515 1.5e-175 620.2 545 73.8
Aqoxy1G04110 Aquilegia oxysepala HOM05D003850 ORTHO05D004515 5.9e-175 618.2 546 66.1
Lj4g0025543 Lotus japonicus HOM05D003850 ORTHO05D004515 1.4e-173 613.6 545 71.0
RhsimUnG0025700 Rhododendron simsii HOM05D003850 ORTHO05D004515 2.7e-172 609.4 590 68.3
RhsimUnG0028500 Rhododendron simsii HOM05D003850 ORTHO05D004515 2.7e-172 609.4 590 68.3
Prupe.4G011300 Prunus persica HOM05D003850 ORTHO05D004515 7.9e-172 607.8 544 68.9
Gorai.010G186300 Gossypium raimondii HOM05D003850 ORTHO05D004515 8.8e-171 604.4 553 71.6
Gohir.A06G153120 Gossypium hirsutum HOM05D003850 ORTHO05D004515 1.5e-170 603.6 553 71.4
PGR102G0753 Punica granatum HOM05D003850 ORTHO05D004515 1.9e-170 603.2 546 71.2
Cc09_g00920 Coffea canephora HOM05D003850 ORTHO05D004515 2.5e-170 602.8 545 73.6
THA.LOC104812992 Tarenaya hassleriana HOM05D003850 ORTHO05D004515 2.2e-169 599.7 550 66.4
Migut.M01390 Erythranthe guttata HOM05D003850 ORTHO05D004515 3.7e-169 599.0 542 64.9
CsaV3_3G028740 Cucumis sativus L. HOM05D003850 ORTHO05D004515 1.4e-168 597.0 542 68.5
Nitab4.5_0001198g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 1.8e-168 596.7 532 69.0
Cfa000110 Carpinus fangiana HOM05D003850 ORTHO05D004515 3.1e-168 595.9 543 72.4
MBI16_g42266_MAGBIO Magnolia biondii HOM05D003850 ORTHO05D004515 9.1e-168 594.3 546 69.0
Gohir.D06G159600 Gossypium hirsutum HOM05D003850 ORTHO05D004515 1.2e-167 594.0 553 70.9
Potri.016G015100 Populus trichocarpa HOM05D003850 ORTHO05D004515 1.5e-167 593.6 544 69.9
Oeu002760.2 Olea europaea HOM05D003850 ORTHO05D004515 1.0e-166 590.9 579 67.5
Sopen11g006940 Solanum pennellii HOM05D003850 ORTHO05D004515 1.0e-166 590.9 543 65.9
SalBow8G5272 Salvia bowleyana HOM05D003850 ORTHO05D004515 1.3e-166 590.5 555 69.2
SGA_v2.0_scaffold4G01878 Striga asiatica HOM05D003850 ORTHO05D004515 1.3e-166 590.5 530 72.5
Lj6g0013016 Lotus japonicus HOM05D003850 ORTHO05D004515 2.1e-164 583.2 548 71.5
Haze_08659 Corylus avellana HOM05D003850 ORTHO05D004515 3.6e-164 582.4 583 65.5
Sabra06G0006900 Salix brachista HOM05D003850 ORTHO05D004515 3.9e-163 578.9 547 67.6
ClCG07G001740 Citrullus lanatus HOM05D003850 ORTHO05D004515 6.7e-163 578.2 542 67.9
PSO210G4264 Papaver somniferum HOM05D003850 ORTHO05D004515 2.6e-162 576.2 545 66.6
Manes.07G088900 Manihot esculenta HOM05D003850 ORTHO05D004515 2.2e-161 573.2 540 67.8
COL.COLO4_31876 Corchorus olitorius HOM05D003850 ORTHO05D004515 6.3e-161 571.6 553 66.0
ECA233G3046 Erigeron canadensis HOM05D003850 ORTHO05D004515 1.1e-160 570.9 550 68.7
vmacro15772 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 5.3e-160 568.5 557 68.9
MD05G1357300 Malus domestica HOM05D003850 ORTHO05D004515 9.1e-160 567.8 553 67.3
Nitab4.5_0000143g0310 Nicotiana tabacum HOM05D003850 ORTHO05D004515 3.4e-159 565.8 531 67.0
AL6G47570 Arabidopsis lyrata HOM05D003850 ORTHO05D004515 7.7e-159 564.7 551 69.5
Cpa.g.sc75.120 Carica papaya HOM05D003850 ORTHO05D004515 9.7e-154 547.7 544 69.5
Sabra16G0017100 Salix brachista HOM05D003850 ORTHO05D004515 2.8e-153 546.2 575 60.9
Aa31LG9G10040 Aethionema arabicum HOM05D003850 ORTHO05D004515 8.2e-153 544.7 565 66.5
CiPaw.10G077600 Carya illinoinensis HOM05D003850 ORTHO05D004515 8.2e-153 544.7 498 66.3
AT4G12610 Arabidopsis thaliana HOM05D003850 ORTHO05D004515 2.4e-152 543.1 552 68.1
TWI63G0294 Tripterygium wilfordii HOM05D003850 ORTHO05D004515 7.0e-152 541.6 514 70.2
Lj2A262G45 Lonicera japonica HOM05D003850 ORTHO05D004515 3.5e-151 539.3 516 70.0
PSO302G0165 Papaver somniferum HOM05D003850 ORTHO05D004515 5.0e-150 535.4 544 64.0
ATR0751G086 Amborella trichopoda HOM05D003850 ORTHO05D004515 3.2e-149 532.7 556 62.9
Sabra16G0000900 Salix brachista HOM05D003850 ORTHO05D004515 4.2e-149 532.3 552 57.4
PGSC0003DMG400013344 Solanum tuberosum HOM05D003850 ORTHO05D004515 4.7e-148 528.9 506 65.8
SEGI_18521 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 4.0e-147 525.8 553 62.2
AUR62021872 Chenopodium quinoa HOM05D003850 ORTHO05D004515 6.7e-147 525.0 546 56.6
HPP92_001629 Vanilla planifolia HOM05D003850 ORTHO05D004515 6.7e-147 525.0 542 58.1
Solyc11g012150.3 Solanum lycopersicum HOM05D003850 ORTHO05D004515 5.7e-146 521.9 506 65.0
Carub.0006s3188 Capsella rubella HOM05D003850 ORTHO05D004515 9.7e-146 521.2 550 66.4
Peaxi162Scf00558g00516 Petunia axillaris HOM05D003850 ORTHO05D004515 2.2e-145 520.0 488 69.9
MD10G1331000 Malus domestica HOM05D003850 ORTHO05D004515 2.8e-145 519.6 525 66.7
Actinidia39269 Actinidia chinensis HOM05D003850 ORTHO05D004515 4.1e-144 515.8 359 79.9
FAN25G3770 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.3e-142 510.8 589 57.2
HanXRQChr15g0470091 Helianthus annuus HOM05D003850 ORTHO05D004515 2.2e-142 510.0 529 68.1
Psat1g176560 Pisum sativum HOM05D003850 ORTHO05D004515 2.9e-142 509.6 467 74.5
SHI24464 Sapria himalayana HOM05D003850 ORTHO05D004515 2.9e-142 509.6 539 58.3
C03p36090 Brassica napus HOM05D003850 ORTHO05D004515 3.8e-142 509.2 549 66.1
BcaC01g04577 Brassica carinata HOM05D003850 ORTHO05D004515 1.5e-141 507.3 551 65.9
BolC3t15918H Brassica oleracea HOM05D003850 ORTHO05D004515 1.5e-141 507.3 551 65.9
FvH4_3g01042 Fragaria vesca HOM05D003850 ORTHO05D004515 1.9e-141 506.9 563 58.6
RcHm_v2.0_Chr5g0001581 Rosa chinensis HOM05D003850 ORTHO05D004515 4.2e-141 505.8 562 60.7
A03p29830 Brassica napus HOM05D003850 ORTHO05D004515 5.5e-141 505.4 549 65.8
BraA03t12173Z Brassica rapa HOM05D003850 ORTHO05D004515 5.5e-141 505.4 551 65.5
vmacro03646 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 3.6e-140 502.7 564 55.1
CARHR253560 Cardamine hirsuta HOM05D003850 ORTHO05D004515 5.7e-138 495.4 547 65.6
unitig_748.g7103 Utricularia gibba HOM05D003850 ORTHO05D004515 1.3e-137 494.2 538 59.9
PSO339G3925 Papaver somniferum HOM05D003850 ORTHO05D004515 1.1e-136 491.1 551 60.8
BcaB01g01757 Brassica carinata HOM05D003850 ORTHO05D004515 1.8e-136 490.3 540 61.7
CAN.G1186.28 Capsicum annuum HOM05D003850 ORTHO05D004515 7.7e-135 485.0 545 58.5
BolC9t56221H Brassica oleracea HOM05D003850 ORTHO05D004515 1.0e-134 484.6 552 61.8
Thhalv10028564m.g Eutrema salsugineum HOM05D003850 ORTHO05D004515 2.3e-134 483.4 547 64.2
Sp6g04900 Schrenkiella parvula HOM05D003850 ORTHO05D004515 9.5e-133 478.0 554 63.2
Hund23984 Selenicereus undatus HOM05D003850 ORTHO05D004515 2.3e-131 473.4 557 61.2
FAN21G1422 Fragaria x ananassa HOM05D003850 ORTHO05D004515 6.8e-131 471.9 581 55.2
Oeu044421.3 Olea europaea HOM05D003850 ORTHO05D004515 2.2e-129 466.8 839 42.6
BcaB01g02623 Brassica carinata HOM05D003850 ORTHO05D004515 4.1e-128 462.6 537 61.5
BraA09t38246Z Brassica rapa HOM05D003850 ORTHO05D004515 2.7e-127 459.9 552 57.6
MELO3C012788.2 Cucumis melo HOM05D003850 ORTHO05D004515 6.6e-126 455.3 466 66.1
CDE04G2591 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 1.9e-125 453.8 547 57.2
Lsat_1_v5_gn_7_13561 Lactuca sativa HOM05D003850 ORTHO05D004515 2.5e-125 453.4 500 65.2
Lj8A171G42 Lonicera japonica HOM05D003850 ORTHO05D004515 5.6e-125 452.2 545 51.0
RhsimUnG0109100 Rhododendron simsii HOM05D003850 ORTHO05D004515 2.8e-124 449.9 532 56.2
EL10Ac8g20176 Beta vulgaris HOM05D003850 ORTHO05D004515 1.7e-121 440.7 551 59.2
Zm00001eb224360 Zea mays HOM05D003850 ORTHO05D004515 1.0e-118 431.4 494 59.3
A09p26740 Brassica napus HOM05D003850 ORTHO05D004515 1.3e-118 431.0 543 56.2
BcaC04g21251 Brassica carinata HOM05D003850 ORTHO05D004515 5.0e-118 429.1 543 58.9
C09p33830 Brassica napus HOM05D003850 ORTHO05D004515 5.0e-118 429.1 543 58.9
Rhsim13G0146600 Rhododendron simsii HOM05D003850 ORTHO05D004515 9.5e-117 424.9 586 51.0
RcHm_v2.0_Chr5g0007791 Rosa chinensis HOM05D003850 ORTHO05D004515 4.9e-113 412.5 557 54.0
Pp3c3_2280 Physcomitrium patens HOM05D003850 ORTHO05D004515 5.4e-112 409.1 553 52.3
Medtr2g025620 Medicago truncatula HOM05D003850 ORTHO05D004515 1.3e-110 404.4 524 59.4
Mapoly0105s0015 Marchantia polymorpha HOM05D003850 ORTHO05D004515 3.1e-107 393.3 552 49.1
Duzib235G1223 Durio zibethinus HOM05D003850 ORTHO05D004515 1.5e-106 391.0 413 66.6
CDE06G1774 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 1.3e-105 387.9 326 64.7
QL09p006300 Quercus lobata HOM05D003850 ORTHO05D004515 3.0e-102 376.7 365 72.9
FvH4_3g04782 Fragaria vesca HOM05D003850 ORTHO05D004515 4.7e-100 369.4 560 48.0
FAN11G3915 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.1e-99 368.2 560 47.9
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 1.2e-98 364.8 443 63.0
FAN21G1676 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.2e-98 364.8 552 48.2
FAN03G2951 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.6e-98 363.6 552 48.0
FAN16G3024 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.6e-98 363.6 557 47.0
FvH4_2g22070 Fragaria vesca HOM05D003850 ORTHO05D004515 4.4e-98 362.8 556 45.9
Zm00001eb398520 Zea mays HOM05D003850 ORTHO05D004515 6.4e-97 359.0 542 42.1
FAN24G0125 Fragaria x ananassa HOM05D003850 ORTHO05D008045 1.6e-95 354.4 555 45.8
Dinv07398 Davidia involucrata HOM05D003850 ORTHO05D004515 1.5e-93 347.8 325 78.5
TPR.G13041 Trifolium pratense HOM05D003850 ORTHO05D004515 6.2e-92 342.4 367 71.7
AUR62012783 Chenopodium quinoa HOM05D003850 ORTHO05D004515 1.1e-91 341.7 425 52.7
TPR.G34491 Trifolium pratense HOM05D003850 ORTHO05D004515 5.8e-90 335.9 195 81.5
AagrBONN_evm.TU.Sc2ySwM_228.4136 Anthoceros agrestis HOM05D003850 ORTHO05D004515 4.9e-81 306.2 375 53.6
Sc17g0007710 Simmondsia chinensis HOM05D003850 ORTHO05D004515 1.4e-67 261.5 370 62.4
SEGI_38016 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 4.0e-67 260.0 332 48.8
Peaxi162Scf00015g02110 Petunia axillaris HOM05D003850 ORTHO05D004515 4.9e-65 253.1 309 55.0
FAN25G2646 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.5e-58 231.5 509 39.3
Actinidia11880 Actinidia chinensis HOM05D003850 ORTHO05D004515 1.7e-57 228.0 337 54.0
HPP92_001646 Vanilla planifolia HOM05D003850 ORTHO05D004515 7.4e-53 212.6 245 60.4
Gorai.002G145900 Gossypium raimondii HOM05D003850 ORTHO05D004515 1.2e-39 168.7 176 79.5
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 3.1e-35 154.1 165 70.3
HPP92_001645 Vanilla planifolia HOM05D003850 ORTHO05D004515 1.6e-34 151.8 101 66.3
CBR_g38333 Chara braunii HOM05D000019 ORTHO05D000002 2.9e-33 147.5 236 40.7
PSO339G5270 Papaver somniferum HOM05D003850 ORTHO05D004515 1.4e-27 128.6 213 45.5
Gohir.D01G119450 Gossypium hirsutum HOM05D003850 ORTHO05D004515 3.5e-26 124.0 102 77.5
CDE06G0619 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 2.5e-24 117.9 222 49.1
arahy.Tifrunner.gnm1.ann1.5H9H8Z Arachis hypogaea HOM05D003850 ORTHO05D004515 4.2e-24 117.1 110 68.2
arahy.Tifrunner.gnm1.ann1.4A53N1 Arachis hypogaea HOM05D003850 ORTHO05D004515 2.7e-23 114.4 113 66.4
TAR629G2548 Trochodendron aralioides HOM05D003850 ORTHO05D004515 1.8e-22 111.7 312 31.1
AagrBONN_evm.TU.Sc2ySwM_228.3786 Anthoceros agrestis HOM05D003850 ORTHO05D004515 1.5e-21 108.6 136 41.9
PSO384G4333 Papaver somniferum HOM05D003850 ORTHO05D004515 6.3e-20 103.2 174 46.0
RcHm_v2.0_Chr6g0288941 Rosa chinensis HOM05D003850 ORTHO05D004515 1.4e-19 102.1 273 37.7
arahy.Tifrunner.gnm1.ann1.N7GRQP Arachis hypogaea HOM05D003850 ORTHO05D004515 9.1e-19 99.4 77 74.0
arahy.Tifrunner.gnm1.ann1.UE8YUV Arachis hypogaea HOM05D003850 ORTHO05D004515 9.1e-19 99.4 77 74.0
VMungo0720G0179 Vigna mungo HOM05D003850 ORTHO05D004515 1.2e-18 99.0 51 86.3
AagrBONN_evm.TU.Sc2ySwM_228.3787 Anthoceros agrestis HOM05D003850 ORTHO05D004515 5.9e-18 96.7 246 36.6
Eucgr.A01650 Eucalyptus grandis HOM05D002251 ORTHO05D004515 1.0e-17 95.9 54 74.1
SEGI_29277 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 3.8e-17 94.0 210 39.0
HPP92_001647 Vanilla planifolia HOM05D003850 ORTHO05D004515 3.6e-15 87.4 110 49.1
Lsat_1_v5_gn_3_78300 Lactuca sativa HOM05D002115 ORTHO05D002263 8.0e-15 86.3 56 80.4
Nitab4.5_0013082g0020 Nicotiana tabacum HOM05D003850 ORTHO05D004515 1.0e-14 85.9 97 49.5
arahy.Tifrunner.gnm1.ann1.GFC3N0 Arachis hypogaea HOM05D003850 ORTHO05D004515 4.0e-14 84.0 94 57.4
FAN21G0780 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.3e-12 79.0 211 40.3
Nitab4.5_0006771g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 2.8e-12 77.8 99 49.5
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 7.0e-11 73.2 65 53.8
CAN.G1186.27 Capsicum annuum HOM05D001620 ORTHO05D005461 1.2e-10 72.4 59 61.0
SEGI_19210 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 6.6e-09 66.6 122 33.6
Aa31LG9G10030 Aethionema arabicum HOM05D003850 ORTHO05D004515 1.4e-06 58.9 54 59.3
CARHR253550 Cardamine hirsuta HOM05D003850 ORTHO05D004515 1.8e-06 58.5 64 48.4
CBR_g38329 Chara braunii HOM05D003850 ORTHO05D004515 3.1e-06 57.8 89 38.2


User provided reference genes

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