Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10288 Trifolium pratense HOM05D006329 ORTHO05D008357 3.8e-219 764.6 409 100.0
Ca_10544_v3 Cicer arietinum L. HOM05D006329 ORTHO05D008357 4.6e-188 661.4 415 86.0
Psat6g180040 Pisum sativum HOM05D006329 ORTHO05D008357 1.2e-185 653.3 410 85.9
Medtr1g094190 Medicago truncatula HOM05D006329 ORTHO05D008357 1.6e-185 652.9 414 88.2
Glyma.10G207800 Glycine max HOM05D006329 ORTHO05D008357 3.6e-161 572.0 404 75.0
Phvul.007G098900 Phaseolus vulgaris HOM05D006329 ORTHO05D008357 1.4e-160 570.1 405 76.0
arahy.Tifrunner.gnm1.ann1.KFTR8M Arachis hypogaea HOM05D006329 ORTHO05D008357 1.3e-153 547.0 416 72.4
Lj5g0015116 Lotus japonicus HOM05D006329 ORTHO05D008357 1.3e-153 547.0 412 75.0
arahy.Tifrunner.gnm1.ann1.21BGD2 Arachis hypogaea HOM05D006329 ORTHO05D008357 6.2e-145 518.1 406 70.7
Lalb_Chr21g0313671 Lupinus albus HOM05D006329 ORTHO05D008357 6.2e-145 518.1 417 71.0
QL08p054507 Quercus lobata HOM05D006329 ORTHO05D008357 3.7e-137 492.3 406 68.0
QL08p054383 Quercus lobata HOM05D006329 ORTHO05D008357 2.6e-135 486.1 406 67.2
Atru.chr12.838 Acer truncatum HOM05D003507 ORTHO05D008357 3.4e-135 485.7 381 65.4
MD07G1170000 Malus domestica HOM05D006329 ORTHO05D008357 1.1e-133 480.7 402 64.4
Potri.008G035500 Populus trichocarpa HOM05D006329 ORTHO05D008357 3.6e-132 475.7 333 71.8
Duzib114G0755 Durio zibethinus HOM05D006329 ORTHO05D008357 7.9e-132 474.6 393 64.9
Nitab4.5_0001450g0040 Nicotiana tabacum HOM05D006329 ORTHO05D008357 1.8e-131 473.4 411 61.8
Nitab4.5_0001659g0150 Nicotiana tabacum HOM05D006329 ORTHO05D008357 3.9e-131 472.2 411 62.0
Sabra08G0023700 Salix brachista HOM05D006329 ORTHO05D008357 3.9e-131 472.2 333 71.5
Sed0004104 Sechium edule HOM05D006329 ORTHO05D008357 8.8e-131 471.1 408 61.0
Prupe.2G208900 Prunus persica HOM05D006329 ORTHO05D008357 1.1e-130 470.7 405 65.4
FvH4_7g18810 Fragaria vesca HOM05D006329 ORTHO05D008357 4.3e-130 468.8 404 64.1
Thecc.10G083200 Theobroma cacao HOM05D006329 ORTHO05D008357 4.3e-130 468.8 334 70.7
FAN10G3782 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.7e-129 466.8 404 61.6
COL.COLO4_17136 Corchorus olitorius HOM05D006329 ORTHO05D008357 2.2e-129 466.5 332 71.4
Manes.05G201000 Manihot esculenta HOM05D006329 ORTHO05D008357 2.2e-129 466.5 419 59.4
VMungo0251G3605 Vigna mungo HOM05D006329 ORTHO05D008357 2.2e-129 466.5 323 73.7
CiPaw.01G268700 Carya illinoinensis HOM05D006329 ORTHO05D008357 2.8e-129 466.1 330 71.5
RcHm_v2.0_Chr1g0362601 Rosa chinensis HOM05D006329 ORTHO05D008357 2.8e-129 466.1 408 62.7
Solyc11g008360.3 Solanum lycopersicum HOM05D006329 ORTHO05D008357 2.8e-129 466.1 409 63.3
CANSAT56G2601 Cannabis sativa HOM05D006329 ORTHO05D008357 3.7e-129 465.7 334 71.3
PGR142G3823 Punica granatum HOM05D006329 ORTHO05D008357 3.7e-129 465.7 384 68.0
Gohir.D10G211400 Gossypium hirsutum HOM05D006329 ORTHO05D008357 8.2e-129 464.5 391 62.9
Gorai.011G237100 Gossypium raimondii HOM05D006329 ORTHO05D008357 8.2e-129 464.5 391 62.9
Gohir.A10G203300 Gossypium hirsutum HOM05D006329 ORTHO05D008357 1.4e-128 463.8 410 61.5
Aqoxy1G01144 Aquilegia oxysepala HOM05D006329 ORTHO05D008357 1.8e-128 463.4 399 61.7
FAN06G3910 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.8e-128 463.4 404 63.4
Nn6g35280 Nelumbo nucifera HOM05D006329 ORTHO05D008357 3.1e-128 462.6 402 60.9
PGSC0003DMG400007434 Solanum tuberosum HOM05D006329 ORTHO05D008357 3.1e-128 462.6 413 63.7
MELO3C019822.2 Cucumis melo HOM05D006329 ORTHO05D008357 4.1e-128 462.2 406 65.0
CsaV3_6G036680 Cucumis sativus L. HOM05D006329 ORTHO05D008357 5.3e-128 461.8 408 65.0
FAN10G0068 Fragaria x ananassa HOM05D006329 ORTHO05D008357 5.3e-128 461.8 404 61.1
Eucgr.G02867 Eucalyptus grandis HOM05D006329 ORTHO05D008357 9.1e-128 461.1 331 70.1
TAR623G1379 Trochodendron aralioides HOM05D006329 ORTHO05D008357 1.2e-127 460.7 414 59.9
THA.LOC104824234 Tarenaya hassleriana HOM05D006329 ORTHO05D008357 4.5e-127 458.8 385 62.6
Ciclev10031516m.g Citrus clementina HOM05D006329 ORTHO05D008357 1.3e-126 457.2 379 63.3
AL4G36440 Arabidopsis lyrata HOM05D006329 ORTHO05D008357 1.7e-126 456.8 417 60.0
Actinidia34805 Actinidia chinensis HOM05D006329 ORTHO05D008357 2.2e-126 456.4 403 60.8
BcaB02g09141 Brassica carinata HOM05D006329 ORTHO05D008357 2.2e-126 456.4 407 60.0
Cc02_g10940 Coffea canephora HOM05D006329 ORTHO05D008357 1.4e-125 453.8 415 59.8
Haze_16856 Corylus avellana HOM05D006329 ORTHO05D008357 1.9e-125 453.4 346 66.2
MBI18_g02633_MAGBIO Magnolia biondii HOM05D006329 ORTHO05D008357 2.5e-125 453.0 335 68.4
AT2G39140 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 3.2e-125 452.6 416 59.6
Thhalv10016747m.g Eutrema salsugineum HOM05D006329 ORTHO05D008357 3.2e-125 452.6 409 60.1
Hma1.2p1_2894F.1_g329960 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 3.2e-125 452.6 407 60.4
Sp4g21490 Schrenkiella parvula HOM05D006329 ORTHO05D008357 2.1e-124 449.9 376 62.8
CARHR133910 Cardamine hirsuta HOM05D006329 ORTHO05D008357 3.6e-124 449.1 339 67.0
ClCG08G007690 Citrullus lanatus HOM05D006329 ORTHO05D008357 6.1e-124 448.4 390 65.9
HanXRQChr14g0456591 Helianthus annuus HOM05D006329 ORTHO05D008357 1.8e-123 446.8 282 76.2
SalBow6G7241 Salvia bowleyana HOM05D006329 ORTHO05D008357 2.3e-123 446.4 332 67.2
Migut.F01702 Erythranthe guttata HOM05D006329 ORTHO05D008357 2.6e-122 443.0 404 58.9
Carub.0004s2119 Capsella rubella HOM05D006329 ORTHO05D008357 5.7e-122 441.8 416 58.9
FAN06G0494 Fragaria x ananassa HOM05D006329 ORTHO05D008357 5.7e-122 441.8 409 61.1
GSVIVG01016221001 Vitis vinifera HOM05D006329 ORTHO05D008357 7.4e-122 441.4 276 77.9
Lsat_1_v5_gn_2_113040 Lactuca sativa HOM05D006329 ORTHO05D008357 9.7e-122 441.0 270 76.7
A05p07160 Brassica napus HOM05D006329 ORTHO05D008357 2.8e-121 439.5 377 61.3
CDE03G0204 Ceratophyllum demersum HOM05D006329 ORTHO05D008357 3.7e-121 439.1 387 60.2
PSO063G6532 Papaver somniferum HOM05D006329 ORTHO05D008357 3.7e-121 439.1 331 66.8
BraA05t19681Z Brassica rapa HOM05D006329 ORTHO05D008357 8.2e-121 438.0 377 61.0
PSO339G5012 Papaver somniferum HOM05D006329 ORTHO05D008357 8.2e-121 438.0 331 66.5
Sopen11g004170 Solanum pennellii HOM05D006329 ORTHO05D008357 2.4e-120 436.4 304 71.4
BcaC02g12042 Brassica carinata HOM05D006329 ORTHO05D008357 7.0e-120 434.9 331 66.2
C04p08570 Brassica napus HOM05D006329 ORTHO05D008357 7.0e-120 434.9 331 66.2
MSTRG.389 Avicennia marina HOM05D006329 ORTHO05D008357 2.0e-119 433.3 404 58.7
BolC4t22452H Brassica oleracea HOM05D006329 ORTHO05D008357 1.3e-118 430.6 331 66.2
EL10Ac6g14260 Beta vulgaris HOM05D006329 ORTHO05D008357 1.5e-117 427.2 310 69.0
SGA_v2.0_scaffold51G18714 Striga asiatica HOM05D006329 ORTHO05D008357 7.2e-117 424.9 388 59.5
FAN03G2323 Fragaria x ananassa HOM05D003507 ORTHO05D004324 1.6e-116 423.7 318 67.9
Ah.02g128110 Amaranthus hybridus HOM05D006329 ORTHO05D008357 4.7e-116 422.2 329 65.7
Oeu013841.1 Olea europaea HOM05D006329 ORTHO05D008357 4.7e-116 422.2 392 58.4
Zm00001eb004240 Zea mays HOM05D006329 ORTHO05D008357 8.0e-116 421.4 414 55.3
Peaxi162Scf00145g01311 Petunia axillaris HOM05D006329 ORTHO05D008357 1.4e-115 420.6 370 61.9
Cfa001679 Carpinus fangiana HOM05D006329 ORTHO05D008357 5.2e-115 418.7 289 71.6
Rhsim09G0148200 Rhododendron simsii HOM05D000461 ORTHO05D001829 5.2e-115 418.7 415 56.9
Cpa.g.sc53.128 Carica papaya HOM05D006329 ORTHO05D008357 2.6e-114 416.4 362 61.0
ATR0219G015 Amborella trichopoda HOM05D006329 ORTHO05D008357 2.8e-113 412.9 315 65.7
ECA238G1295 Erigeron canadensis HOM05D006329 ORTHO05D001676 1.1e-112 411.0 247 78.1
CAN.G321.64 Capsicum annuum HOM05D006329 ORTHO05D008357 2.6e-111 406.4 257 75.1
DCAR_005490 Daucus carota HOM05D006329 ORTHO05D008357 1.3e-110 404.1 296 67.2
EL10Ac4g09587 Beta vulgaris HOM05D006329 ORTHO05D008357 2.5e-109 399.8 300 67.0
HPP92_026018 Vanilla planifolia HOM05D006329 ORTHO05D008357 2.5e-109 399.8 330 62.7
vmacro04842 Vaccinium macrocarpon HOM05D006329 ORTHO05D008357 2.0e-106 390.2 347 60.5
Lalb_Chr21g0313541 Lupinus albus HOM05D006329 ORTHO05D008357 4.4e-106 389.0 210 88.1
HPP92_027741 Vanilla planifolia HOM05D006329 ORTHO05D008357 6.3e-105 385.2 313 64.9
Hund20700 Selenicereus undatus HOM05D006329 ORTHO05D008357 2.0e-103 380.2 410 52.2
Os03g0152700 Oryza sativa ssp. japonica HOM05D006329 ORTHO05D008357 5.0e-102 375.6 305 61.3
CSS0005771 Camellia sinensis var. sinensis HOM05D006329 ORTHO05D008357 3.2e-101 372.9 400 54.0
RhsimUnG0185600 Rhododendron simsii HOM05D000461 ORTHO05D001829 6.8e-99 365.2 234 76.1
AUR62002759 Chenopodium quinoa HOM05D006329 ORTHO05D008357 9.8e-98 361.3 242 73.6
Dinv31231 Davidia involucrata HOM05D006329 ORTHO05D008357 1.7e-97 360.5 324 59.9
Lj3A938T44 Lonicera japonica HOM05D006329 ORTHO05D008357 1.8e-91 340.5 384 52.9
Mapoly0002s0007 Marchantia polymorpha HOM05D006329 ORTHO05D008357 1.3e-89 334.3 264 61.7
Pp3c7_13640 Physcomitrium patens HOM05D006329 ORTHO05D008357 3.9e-86 322.8 290 57.9
SMO329G0071 Selaginella moellendorffii HOM05D006329 ORTHO05D008357 1.2e-82 311.2 253 59.7
Aa31LG5G20460 Aethionema arabicum HOM05D006329 ORTHO05D008357 6.4e-81 305.4 340 52.1
Cfa001678 Carpinus fangiana HOM05D006329 ORTHO05D008357 9.2e-80 301.6 227 67.4
Sc09g0006060 Simmondsia chinensis HOM05D006329 ORTHO05D008357 3.2e-72 276.6 204 67.6
FAN01G2166 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.2e-66 258.1 189 68.3
HPP92_026744 Vanilla planifolia HOM05D006329 ORTHO05D008357 1.6e-63 247.7 254 54.3
CBR_g29624 Chara braunii HOM05D006329 ORTHO05D008357 2.3e-54 217.2 162 64.8
MCO14G528 Micromonas commoda HOM05D006329 ORTHO05D008357 4.3e-53 213.0 254 45.3
Cre02.g095121 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 5.8e-50 202.6 323 39.3
AUR62014125 Chenopodium quinoa HOM05D006329 ORTHO05D008357 2.8e-44 183.7 121 74.4
PRCOL_00004574 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 5.3e-43 179.5 252 40.5
CAN.G176.13 Capsicum annuum HOM05D006329 ORTHO05D033978 9.6e-29 132.1 83 72.3
Hma1.2p1_2894F.1_g329970 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 4.8e-28 129.8 81 74.1
Pp3s196_90 Physcomitrium patens HOM05D006329 ORTHO05D008357 4.8e-28 129.8 247 31.2
AT3G43340 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 4.6e-23 113.2 74 73.0
Glyma.20G182966 Glycine max HOM05D006329 ORTHO05D028485 1.3e-17 95.1 88 58.0
Hma1.2p1_2894F.1_g329973 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 2.2e-17 94.4 56 76.8
Cre07.g323550 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 3.8e-17 93.6 254 30.3
MCO04G216 Micromonas commoda HOM05D006329 ORTHO05D008357 3.3e-13 80.5 265 27.9
MCO01G641 Micromonas commoda HOM05D006329 ORTHO05D008357 1.4e-11 75.1 248 27.8
CAN.G184.4 Capsicum annuum HOM05D006329 ORTHO05D028485 2.4e-11 74.3 53 62.3
Lalb_Chr21g0313531 Lupinus albus HOM05D006329 ORTHO05D008357 9.1e-11 72.4 103 46.6
Potri.010G226901 Populus trichocarpa HOM05D006329 ORTHO05D028485 8.5e-09 65.9 51 64.7


User provided reference genes

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