Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1168 Trochodendron aralioides HOM05D006129 ORTHO05D007446 0.0e+00 1127.1 560 100.0
Dinv42121 Davidia involucrata HOM05D006129 ORTHO05D007446 1.7e-257 892.5 546 79.3
GSVIVG01031785001 Vitis vinifera HOM05D006129 ORTHO05D007446 1.8e-248 862.4 546 76.2
Nn4g23272 Nelumbo nucifera HOM05D006129 ORTHO05D007446 3.5e-247 858.2 547 75.5
QL11p038411 Quercus lobata HOM05D006129 ORTHO05D007446 7.5e-242 840.5 541 75.0
Thecc.02G095400 Theobroma cacao HOM05D006129 ORTHO05D007446 9.8e-242 840.1 546 73.3
TWI79G0519 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 1.7e-241 839.3 543 75.0
Haze_01881 Corylus avellana HOM05D006129 ORTHO05D007446 2.9e-241 838.6 535 75.0
Lj5P206T15 Lonicera japonica HOM05D006129 ORTHO05D007446 8.3e-241 837.0 547 74.2
Cfa005424 Carpinus fangiana HOM05D006129 ORTHO05D007446 2.7e-239 832.0 536 74.3
CSS0025307 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 4.6e-239 831.2 546 74.0
CSS0048591 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 4.6e-239 831.2 546 74.0
TWI31G0609 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 6.0e-239 830.9 543 73.3
TAR371G0476 Trochodendron aralioides HOM05D006129 ORTHO05D007446 1.0e-238 830.1 469 85.7
Duzib248G0151 Durio zibethinus HOM05D006129 ORTHO05D007446 1.7e-238 829.3 546 72.3
CiPaw.05G055300 Carya illinoinensis HOM05D006129 ORTHO05D007446 2.8e-236 822.0 547 72.8
COL.COLO4_11724 Corchorus olitorius HOM05D006129 ORTHO05D007446 8.3e-233 810.4 545 71.7
Aqoxy3G03484 Aquilegia oxysepala HOM05D006129 ORTHO05D007446 1.1e-229 800.0 538 71.7
Cpa.g.sc62.53 Carica papaya HOM05D006129 ORTHO05D007446 1.6e-228 796.2 548 71.2
CANSAT25G2181 Cannabis sativa HOM05D006129 ORTHO05D007446 2.3e-227 792.3 545 69.0
Actinidia12976 Actinidia chinensis HOM05D006129 ORTHO05D007446 3.1e-227 792.0 510 74.5
RcHm_v2.0_Chr6g0259211 Rosa chinensis HOM05D006129 ORTHO05D007446 8.9e-227 790.4 546 68.7
Rhsim11G0169300 Rhododendron simsii HOM05D006129 ORTHO05D007446 1.3e-225 786.6 546 70.7
MD10G1089000 Malus domestica HOM05D006129 ORTHO05D007446 2.2e-225 785.8 546 69.4
vmacro02172 Vaccinium macrocarpon HOM05D006129 ORTHO05D007446 4.9e-225 784.6 546 70.3
Manes.17G094600 Manihot esculenta HOM05D006129 ORTHO05D007446 1.1e-224 783.5 546 70.9
Potri.009G106800 Populus trichocarpa HOM05D006129 ORTHO05D007446 1.2e-223 780.0 550 69.5
Atru.BG.82.p Acer truncatum HOM05D006129 ORTHO05D007446 5.6e-221 771.2 504 71.6
Dinv23594 Davidia involucrata HOM05D006129 ORTHO05D007446 2.8e-220 768.8 546 70.7
FvH4_2g06900 Fragaria vesca HOM05D006129 ORTHO05D007446 2.8e-220 768.8 529 66.9
FAN27G0179 Fragaria x ananassa HOM05D006129 ORTHO05D007446 3.6e-220 768.5 546 65.8
Ciclev10027854m.g Citrus clementina HOM05D006129 ORTHO05D007446 6.2e-220 767.7 546 67.9
ClCG07G001810 Citrullus lanatus HOM05D006129 ORTHO05D007446 1.5e-218 763.1 541 68.2
FAN20G2787 Fragaria x ananassa HOM05D006129 ORTHO05D007446 2.2e-217 759.2 545 65.5
FAN24G2628 Fragaria x ananassa HOM05D006129 ORTHO05D007446 3.8e-217 758.4 529 66.0
FAN15G2181 Fragaria x ananassa HOM05D006129 ORTHO05D007446 1.1e-216 756.9 531 66.3
Gohir.D01G006000 Gossypium hirsutum HOM05D006129 ORTHO05D007446 1.4e-216 756.5 547 66.4
Gohir.A01G005900 Gossypium hirsutum HOM05D006129 ORTHO05D007446 2.4e-216 755.7 540 66.9
Gorai.002G007000 Gossypium raimondii HOM05D006129 ORTHO05D007446 1.2e-215 753.4 547 66.2
Prupe.8G116000 Prunus persica HOM05D006129 ORTHO05D007446 1.3e-214 750.0 531 68.2
MELO3C026699.2 Cucumis melo HOM05D006129 ORTHO05D007446 3.0e-214 748.8 541 67.1
CsaV3_3G028800 Cucumis sativus L. HOM05D006129 ORTHO05D007446 1.3e-212 743.4 541 66.4
Sed0004701 Sechium edule HOM05D006129 ORTHO05D007446 2.4e-211 739.2 540 65.6
Lalb_Chr10g0095451 Lupinus albus HOM05D006129 ORTHO05D007446 5.3e-211 738.0 534 65.7
Medtr1g026035 Medicago truncatula HOM05D006129 ORTHO05D007446 1.2e-210 736.9 534 64.8
Lj2g0010354 Lotus japonicus HOM05D006129 ORTHO05D007446 3.4e-210 735.3 534 67.0
DCAR_003623 Daucus carota HOM05D006129 ORTHO05D007446 9.9e-210 733.8 543 65.2
Nitab4.5_0001453g0090 Nicotiana tabacum HOM05D006129 ORTHO05D007446 2.2e-209 732.6 551 64.1
Eucgr.L01320 Eucalyptus grandis HOM05D006129 ORTHO05D007446 6.4e-209 731.1 543 65.7
Peaxi162Scf00789g00530 Petunia axillaris HOM05D006129 ORTHO05D007446 5.4e-208 728.0 546 63.7
Glyma.20G009700 Glycine max HOM05D006129 ORTHO05D007446 3.9e-206 721.8 534 64.0
Ca_13480_v3 Cicer arietinum L. HOM05D006129 ORTHO05D007446 8.7e-206 720.7 534 64.6
Oeu057674.1 Olea europaea HOM05D006129 ORTHO05D007446 2.5e-205 719.2 546 64.7
PGR042G1055 Punica granatum HOM05D006129 ORTHO05D007446 4.8e-204 714.9 548 63.7
Nitab4.5_0007303g0010 Nicotiana tabacum HOM05D006129 ORTHO05D007446 1.1e-203 713.8 551 62.6
Glyma.07G178800 Glycine max HOM05D006129 ORTHO05D007446 2.4e-203 712.6 534 62.9
CAN.G644.34 Capsicum annuum HOM05D006129 ORTHO05D007446 5.3e-203 711.4 546 63.0
PGSC0003DMG400026525 Solanum tuberosum HOM05D006129 ORTHO05D007446 1.5e-202 709.9 543 62.8
Sopen11g026560 Solanum pennellii HOM05D006129 ORTHO05D007446 2.6e-202 709.1 549 62.8
arahy.Tifrunner.gnm1.ann1.769PPM Arachis hypogaea HOM05D006129 ORTHO05D007446 3.4e-202 708.8 536 63.4
Sc08g0000140 Simmondsia chinensis HOM05D006129 ORTHO05D007446 3.8e-201 705.3 537 64.2
Solyc11g066850.3 Solanum lycopersicum HOM05D006129 ORTHO05D007446 4.9e-201 704.9 549 62.3
Phvul.002G308800 Phaseolus vulgaris HOM05D006129 ORTHO05D007446 3.2e-200 702.2 533 63.4
VMungo0464G0688 Vigna mungo HOM05D006129 ORTHO05D007446 4.2e-200 701.8 532 62.6
TPR.G26422 Trifolium pratense HOM05D006129 ORTHO05D007446 1.6e-199 699.9 534 62.5
THA.LOC104807348 Tarenaya hassleriana HOM05D006129 ORTHO05D007446 8.7e-198 694.1 538 62.1
Thhalv10022548m.g Eutrema salsugineum HOM05D006129 ORTHO05D007446 7.4e-197 691.0 543 61.0
AL3G47590 Arabidopsis lyrata HOM05D006129 ORTHO05D007446 2.1e-196 689.5 527 62.0
MSTRG.20134 Avicennia marina HOM05D006129 ORTHO05D007446 6.2e-196 688.0 545 61.8
CARHR106180 Cardamine hirsuta HOM05D006129 ORTHO05D007446 1.2e-194 683.7 547 60.7
Carub.0003s2972 Capsella rubella HOM05D006129 ORTHO05D007446 4.5e-194 681.8 534 61.2
AT2G15820 Arabidopsis thaliana HOM05D006129 ORTHO05D007446 7.6e-194 681.0 539 62.0
Lsat_1_v5_gn_5_113460 Lactuca sativa HOM05D006129 ORTHO05D007446 7.6e-194 681.0 541 61.6
Sp3g29130 Schrenkiella parvula HOM05D006129 ORTHO05D007446 1.3e-193 680.2 511 63.4
EL10Ac9g21818 Beta vulgaris HOM05D006129 ORTHO05D007446 1.6e-191 673.3 544 59.0
ECA234G4125 Erigeron canadensis HOM05D006129 ORTHO05D007446 7.9e-191 671.0 536 60.8
Medtr0381s0010 Medicago truncatula HOM05D006129 ORTHO05D007446 7.9e-191 671.0 534 60.3
Migut.B00306 Erythranthe guttata HOM05D006129 ORTHO05D007446 1.3e-190 670.2 535 60.6
A07p04960 Brassica napus HOM05D006129 ORTHO05D007446 1.9e-189 666.4 511 61.6
HanXRQChr10g0303221 Helianthus annuus HOM05D006129 ORTHO05D007446 9.0e-187 657.5 541 59.3
BraA07t28289Z Brassica rapa HOM05D006129 ORTHO05D007446 1.5e-186 656.8 511 60.9
BcaB03g16332 Brassica carinata HOM05D006129 ORTHO05D007446 2.6e-186 656.0 519 60.3
BcaC06g36090 Brassica carinata HOM05D006129 ORTHO05D007446 3.4e-186 655.6 511 61.3
C07p07940 Brassica napus HOM05D006129 ORTHO05D007446 3.4e-186 655.6 511 61.3
BolC7t41212H Brassica oleracea HOM05D006129 ORTHO05D007446 3.4e-186 655.6 511 61.3
AUR62011424 Chenopodium quinoa HOM05D006129 ORTHO05D007446 3.4e-186 655.6 527 58.8
ATR0665G475 Amborella trichopoda HOM05D006129 ORTHO05D007446 7.6e-186 654.4 544 58.8
Eucgr.G01504 Eucalyptus grandis HOM05D006129 ORTHO05D007446 1.6e-180 636.7 481 65.1
Aa31LG8G13380 Aethionema arabicum HOM05D006129 ORTHO05D007446 2.0e-178 629.8 511 59.3
Os02g0702000 Oryza sativa ssp. japonica HOM05D006129 ORTHO05D007446 4.5e-178 628.6 526 56.3
Ah.01g006750 Amaranthus hybridus HOM05D006129 ORTHO05D007446 7.7e-178 627.9 539 56.0
unitig_744.g24241 Utricularia gibba HOM05D006129 ORTHO05D007446 2.3e-174 616.3 537 54.7
Cc02_g18440 Coffea canephora HOM05D006129 ORTHO05D007446 2.4e-171 606.3 469 64.0
Zm00001eb251880 Zea mays HOM05D006129 ORTHO05D007446 2.0e-170 603.2 560 53.8
SGA_v2.0_scaffold58G20604 Striga asiatica HOM05D006129 ORTHO05D007446 7.2e-168 594.7 554 54.5
HPP92_022045 Vanilla planifolia HOM05D006129 ORTHO05D007446 2.7e-167 592.8 536 54.1
AUR62016636 Chenopodium quinoa HOM05D006129 ORTHO05D007446 2.6e-162 576.2 461 59.0
Sabra09G0081600 Salix brachista HOM05D006129 ORTHO05D007446 3.5e-162 575.9 413 68.0
SEGI_31419 Sequoiadendron giganteum HOM05D006129 ORTHO05D007446 5.0e-137 492.3 535 46.9
CDE04G1903 Ceratophyllum demersum HOM05D006129 ORTHO05D007446 1.6e-111 407.5 486 45.3
Eucgr.L00820 Eucalyptus grandis HOM05D006129 ORTHO05D007446 1.5e-101 374.4 304 61.2
QL11p038542 Quercus lobata HOM05D006129 ORTHO05D007446 1.1e-99 368.2 264 69.7
Psat6g001360 Pisum sativum HOM05D006129 ORTHO05D007446 2.1e-98 364.0 534 39.0
TAR371G0992 Trochodendron aralioides HOM05D006129 ORTHO05D007446 7.3e-96 355.5 547 42.6
Atru.chr5.2887 Acer truncatum HOM05D006129 ORTHO05D007446 6.0e-82 309.3 328 51.5
Hund00318 Selenicereus undatus HOM05D006129 ORTHO05D007446 1.3e-76 291.6 212 63.2
Pp3c25_10050 Physcomitrium patens HOM05D006129 ORTHO05D007446 3.0e-65 253.8 565 30.8
Atru.chr5.2823 Acer truncatum HOM05D006129 ORTHO05D007446 9.7e-64 248.8 328 44.2
AagrBONN_evm.TU.Sc2ySwM_344.1734 Anthoceros agrestis HOM05D006129 ORTHO05D007446 3.9e-57 226.9 511 29.5
TAR371G0058 Trochodendron aralioides HOM05D006129 ORTHO05D007446 7.2e-51 206.1 111 90.1
SMO356G0628 Selaginella moellendorffii HOM05D006129 ORTHO05D007446 1.4e-41 175.3 562 24.2
Atru.chr5.2826 Acer truncatum HOM05D006129 ORTHO05D007446 1.3e-39 168.7 110 72.7
Mapoly0036s0055 Marchantia polymorpha HOM05D006129 ORTHO05D007446 2.9e-36 157.5 527 23.5
AagrBONN_evm.TU.Sc2ySwM_344.5085 Anthoceros agrestis HOM05D006129 ORTHO05D007446 3.8e-36 157.1 321 31.8
Atru.chr5.2882 Acer truncatum HOM05D006129 ORTHO05D007446 4.2e-35 153.7 198 44.9
Atru.chr5.2881 Acer truncatum HOM05D006129 ORTHO05D007446 1.0e-33 149.1 103 69.9
Pp3c16_23700 Physcomitrium patens HOM05D006129 ORTHO05D007446 5.2e-25 120.2 144 44.4
TAR371G0388 Trochodendron aralioides HOM05D001464 ORTHO05D002836 1.9e-19 101.7 55 87.3
CBR_g8924 Chara braunii HOM05D006129 ORTHO05D007446 2.0e-13 81.6 288 24.7
CBR_g19584 Chara braunii HOM05D006129 ORTHO05D007446 8.6e-12 76.3 516 18.8
AagrBONN_evm.TU.Sc2ySwM_117.4077 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.0e-08 65.1 235 20.9
AagrBONN_evm.TU.Sc2ySwM_228.1156 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.6e-08 64.7 259 19.7
AagrBONN_evm.TU.Sc2ySwM_362.237 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.5e-08 63.2 218 23.4
Nitab4.5_0004523g0010 Nicotiana tabacum HOM05D000300 ORTHO05D000383 9.8e-08 62.8 232 24.6
Glyma.07G173900 Glycine max HOM05D000001 ORTHO05D000003 2.2e-07 61.6 188 27.1
Glyma.02G087100 Glycine max HOM05D000001 ORTHO05D000003 2.9e-07 61.2 184 27.7
Migut.N00112 Erythranthe guttata HOM05D000001 ORTHO05D000003 3.7e-07 60.8 222 24.3
AagrBONN_evm.TU.Sc2ySwM_228.411 Anthoceros agrestis HOM05D000001 ORTHO05D000003 8.3e-07 59.7 226 22.6
MELO3C020309.2 Cucumis melo HOM05D000001 ORTHO05D000003 8.3e-07 59.7 184 25.5
Prupe.7G236400 Prunus persica HOM05D000001 ORTHO05D000003 1.1e-06 59.3 251 24.3
SEGI_19497 Sequoiadendron giganteum HOM05D000001 ORTHO05D000003 1.1e-06 59.3 261 21.5
Migut.B00737 Erythranthe guttata HOM05D000001 ORTHO05D000003 1.4e-06 58.9 179 26.3
Nn4g23224 Nelumbo nucifera HOM05D000001 ORTHO05D009664 1.4e-06 58.9 236 25.0
VMungo1215G3287 Vigna mungo HOM05D000001 ORTHO05D000003 1.4e-06 58.9 188 27.1
AagrBONN_evm.TU.Sc2ySwM_362.2108 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.4e-06 58.2 260 20.0
Lj2g0019511 Lotus japonicus HOM05D000001 ORTHO05D000003 2.4e-06 58.2 230 21.7
Nn1g04528 Nelumbo nucifera HOM05D000001 ORTHO05D009664 2.4e-06 58.2 183 28.4
TPR.G21347 Trifolium pratense HOM05D000001 ORTHO05D000003 3.2e-06 57.8 181 27.6
Aa31LG10G8340 Aethionema arabicum HOM05D001779 ORTHO05D001753 4.1e-06 57.4 145 28.3
AagrBONN_evm.TU.Sc2ySwM_117.2924__2925 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.1e-06 57.4 239 22.6
AagrBONN_evm.TU.Sc2ySwM_228.1649 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.1e-06 57.4 246 19.9
AagrBONN_evm.TU.Sc2ySwM_344.1738 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.1e-06 57.4 205 21.5
AagrBONN_evm.TU.Sc2ySwM_344.4894__4895 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.1e-06 57.4 218 21.1
AagrBONN_evm.TU.Sc2ySwM_368.592 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.1e-06 57.4 244 24.6
AT3G53170 Arabidopsis thaliana HOM05D001779 ORTHO05D001753 4.1e-06 57.4 278 23.4
Thhalv10002816m.g Eutrema salsugineum HOM05D000001 ORTHO05D000003 4.1e-06 57.4 209 23.4
MBI07_g07827_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D026255 4.1e-06 57.4 207 24.2
Oeu030203.1 Olea europaea HOM05D006287 ORTHO05D000003 5.4e-06 57.0 195 24.6
Atru.chr6.2084 Acer truncatum HOM05D000001 ORTHO05D006238 7.0e-06 56.6 235 24.7
AagrBONN_evm.TU.Sc2ySwM_344.5586 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.0e-06 56.6 231 22.5
CDE05G0489 Ceratophyllum demersum HOM05D007202 ORTHO05D009125 7.0e-06 56.6 139 25.2
CsaV3_3G017800 Cucumis sativus L. HOM05D000001 ORTHO05D000003 7.0e-06 56.6 180 24.4
FvH4_7g07400 Fragaria vesca HOM05D000001 ORTHO05D000003 7.0e-06 56.6 180 23.9
FAN06G1555 Fragaria x ananassa HOM05D000001 ORTHO05D000003 7.0e-06 56.6 180 23.9
FAN10G0717 Fragaria x ananassa HOM05D000001 ORTHO05D000003 7.0e-06 56.6 180 23.9
PSO017G3749 Papaver somniferum HOM05D000001 ORTHO05D000003 7.0e-06 56.6 213 21.6
AagrBONN_evm.TU.Sc2ySwM_368.3189 Anthoceros agrestis HOM05D000001 ORTHO05D000003 9.2e-06 56.2 231 22.1
Nn1g06130 Nelumbo nucifera HOM05D000001 ORTHO05D010146 9.2e-06 56.2 180 26.7
Nitab4.5_0001788g0050 Nicotiana tabacum HOM05D000300 ORTHO05D000383 9.2e-06 56.2 232 24.6
SMO140G0061 Selaginella moellendorffii HOM05D000001 ORTHO05D375049 9.2e-06 56.2 212 22.6


User provided reference genes

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