Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0763 Trochodendron aralioides HOM05D002849 ORTHO05D007186 3.7e-210 734.6 358 100.0
GSVIVG01008705001 Vitis vinifera HOM05D002849 ORTHO05D007186 4.4e-187 657.9 371 87.3
Nn6g31840 Nelumbo nucifera HOM05D002849 ORTHO05D007186 6.4e-186 654.1 358 89.9
Dinv39573 Davidia involucrata HOM05D002849 ORTHO05D007186 1.4e-185 652.9 361 89.5
Prupe.1G356900 Prunus persica HOM05D002849 ORTHO05D007186 3.2e-185 651.7 357 88.8
Duzib093G2127 Durio zibethinus HOM05D002849 ORTHO05D007186 1.6e-184 649.4 356 89.3
Potri.005G083500 Populus trichocarpa HOM05D002849 ORTHO05D007186 3.0e-183 645.2 350 89.4
FvH4_2g37771 Fragaria vesca HOM05D002849 ORTHO05D007186 3.9e-183 644.8 359 88.9
Thecc.08G055100 Theobroma cacao HOM05D002849 ORTHO05D007186 3.9e-183 644.8 356 88.2
Atru.chr13.175_Atru.chr13.176 Acer truncatum HOM05D002849 ORTHO05D007186 5.6e-182 641.0 362 87.8
Aqoxy6G01855 Aquilegia oxysepala HOM05D002849 ORTHO05D007186 5.6e-182 641.0 358 88.0
CSS0035799 Camellia sinensis var. sinensis HOM05D002849 ORTHO05D007186 5.6e-182 641.0 360 87.8
Ciclev10001644m.g Citrus clementina HOM05D002849 ORTHO05D007186 1.6e-181 639.4 358 86.9
TWI56G0831 Tripterygium wilfordii HOM05D002849 ORTHO05D007186 1.6e-181 639.4 358 86.0
Gohir.A05G181300 Gossypium hirsutum HOM05D002849 ORTHO05D007186 2.1e-181 639.0 356 86.8
PGR083G0750 Punica granatum HOM05D002849 ORTHO05D007186 2.8e-181 638.6 360 86.7
Gohir.D05G184300 Gossypium hirsutum HOM05D002849 ORTHO05D007186 3.6e-181 638.3 356 86.8
Gorai.009G189800 Gossypium raimondii HOM05D002849 ORTHO05D007186 3.6e-181 638.3 356 86.8
MD08G1004800 Malus domestica HOM05D002849 ORTHO05D007186 3.6e-181 638.3 355 88.2
Cc10_g00890 Coffea canephora HOM05D002849 ORTHO05D007186 6.2e-181 637.5 358 87.7
Manes.08G142100 Manihot esculenta HOM05D002849 ORTHO05D007186 1.8e-180 636.0 357 86.6
Migut.N03194 Erythranthe guttata HOM05D002849 ORTHO05D007186 2.0e-179 632.5 357 85.7
Sc02g0008960 Simmondsia chinensis HOM05D002849 ORTHO05D007186 2.0e-179 632.5 360 86.4
Eucgr.F03540 Eucalyptus grandis HOM05D002849 ORTHO05D007186 3.4e-179 631.7 359 86.6
THA.LOC104811452 Tarenaya hassleriana HOM05D002849 ORTHO05D007186 3.4e-179 631.7 359 85.5
CiPaw.08G071100 Carya illinoinensis HOM05D002849 ORTHO05D007186 4.4e-179 631.3 356 86.8
Hund05132 Selenicereus undatus HOM05D002849 ORTHO05D007186 4.4e-179 631.3 352 86.9
Cfa017767 Carpinus fangiana HOM05D002849 ORTHO05D007186 6.4e-178 627.5 332 91.3
CANSAT11G2551 Cannabis sativa HOM05D002849 ORTHO05D007186 1.6e-176 622.9 354 84.7
vmacro21838 Vaccinium macrocarpon HOM05D002849 ORTHO05D007186 2.7e-176 622.1 414 76.3
PSO675G6932 Papaver somniferum HOM05D002849 ORTHO05D007186 3.5e-176 621.7 356 85.4
ClCG08G013910 Citrullus lanatus HOM05D002849 ORTHO05D007186 6.0e-176 620.9 363 84.0
Carub.0004s2686 Capsella rubella HOM05D002849 ORTHO05D007186 7.8e-176 620.5 356 85.1
PSO541G1452 Papaver somniferum HOM05D002849 ORTHO05D007186 1.0e-175 620.2 357 85.2
AL2G36230 Arabidopsis lyrata HOM05D002849 ORTHO05D007186 1.7e-175 619.4 359 85.5
Carub.0002s2306 Capsella rubella HOM05D002849 ORTHO05D007186 2.3e-175 619.0 359 84.4
AT2G44270 Arabidopsis thaliana HOM05D002849 ORTHO05D007186 3.0e-175 618.6 356 85.1
CARHR069720 Cardamine hirsuta HOM05D002849 ORTHO05D007186 5.1e-175 617.8 360 85.0
Rhsim06G0009600 Rhododendron simsii HOM05D002849 ORTHO05D007186 5.1e-175 617.8 405 77.5
Thhalv10018770m.g Eutrema salsugineum HOM05D002849 ORTHO05D007186 6.6e-175 617.5 360 84.4
Sp4g26340 Schrenkiella parvula HOM05D002849 ORTHO05D007186 6.6e-175 617.5 359 83.3
MELO3C011328.2 Cucumis melo HOM05D002849 ORTHO05D007186 8.6e-175 617.1 360 83.6
AL4G43230 Arabidopsis lyrata HOM05D002849 ORTHO05D007186 5.6e-174 614.4 356 84.6
FAN20G1564 Fragaria x ananassa HOM05D002849 ORTHO05D007186 1.2e-173 613.2 359 85.8
A05p04470 Brassica napus HOM05D002849 ORTHO05D007186 2.1e-173 612.5 372 80.9
Lsat_1_v5_gn_3_7661 Lactuca sativa HOM05D002849 ORTHO05D007186 3.6e-173 611.7 350 87.1
FAN27G2060 Fragaria x ananassa HOM05D002849 ORTHO05D007186 1.4e-172 609.8 359 85.5
BraA05t19423Z Brassica rapa HOM05D002849 ORTHO05D007186 3.1e-172 608.6 382 78.8
Haze_22739 Corylus avellana HOM05D002849 ORTHO05D007186 1.2e-171 606.7 372 81.2
Aa31LG1G25890 Aethionema arabicum HOM05D002849 ORTHO05D007186 1.5e-171 606.3 359 83.3
Sed0011348 Sechium edule HOM05D002849 ORTHO05D007186 2.0e-171 605.9 361 83.1
ECA246G5259 Erigeron canadensis HOM05D002849 ORTHO05D007186 3.4e-171 605.1 321 91.0
Oeu046334.1 Olea europaea HOM05D002849 ORTHO05D007186 2.2e-170 602.4 335 87.5
MBI08_g35553_MAGBIO Magnolia biondii HOM05D002849 ORTHO05D007186 2.9e-170 602.1 364 82.4
Ca_15284_v3 Cicer arietinum L. HOM05D002849 ORTHO05D007186 4.9e-170 601.3 351 82.9
Ca_15420_v3 Cicer arietinum L. HOM05D002849 ORTHO05D007186 4.9e-170 601.3 351 82.9
C04p05180 Brassica napus HOM05D002849 ORTHO05D007186 7.1e-169 597.4 365 80.5
QL02p013578 Quercus lobata HOM05D002849 ORTHO05D007186 7.1e-169 597.4 382 78.5
Lj1g0000302 Lotus japonicus HOM05D002849 ORTHO05D007186 1.2e-168 596.7 343 84.3
Os02g0762300 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D007186 1.2e-168 596.7 354 81.6
BolC4t22158H Brassica oleracea HOM05D002849 ORTHO05D007186 2.7e-168 595.5 394 75.9
Glyma.04G002200 Glycine max HOM05D002849 ORTHO05D007186 6.0e-168 594.3 356 80.6
HPP92_024207 Vanilla planifolia HOM05D002849 ORTHO05D007186 1.7e-167 592.8 363 82.1
Hma1.2p1_1100F.1_g257100 Hydrangea macrophylla HOM05D002849 ORTHO05D007186 6.6e-167 590.9 361 82.8
BraA07t31703Z Brassica rapa HOM05D002849 ORTHO05D007186 1.9e-166 589.3 378 78.6
Medtr3g118250 Medicago truncatula HOM05D002849 ORTHO05D007186 1.9e-166 589.3 345 82.6
Zm00001eb255730 Zea mays HOM05D002849 ORTHO05D007186 4.3e-166 588.2 360 79.7
Phvul.009G117600 Phaseolus vulgaris HOM05D002849 ORTHO05D007186 8.1e-165 583.9 358 78.8
BcaB02g08806 Brassica carinata HOM05D002849 ORTHO05D007186 5.3e-164 581.3 361 80.1
BcaNung06602 Brassica carinata HOM05D002849 ORTHO05D007186 1.5e-163 579.7 361 79.8
Lj4A14T52 Lonicera japonica HOM05D002849 ORTHO05D007186 2.6e-163 578.9 398 74.9
CsaV3_2G024550 Cucumis sativus L. HOM05D000201 ORTHO05D000490 3.4e-163 578.6 362 79.3
arahy.Tifrunner.gnm1.ann1.ID8SUW Arachis hypogaea HOM05D002849 ORTHO05D007186 1.1e-161 573.5 350 80.3
Nitab4.5_0001131g0060 Nicotiana tabacum HOM05D002849 ORTHO05D007186 9.3e-161 570.5 366 79.0
unitig_744.g24607 Utricularia gibba HOM05D002849 ORTHO05D007186 2.1e-160 569.3 345 82.0
A07p41740 Brassica napus HOM05D002849 ORTHO05D007186 2.8e-157 558.9 313 85.6
C06p50120 Brassica napus HOM05D002849 ORTHO05D007186 9.0e-156 553.9 360 77.8
Os01g0598900 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D007186 9.0e-156 553.9 327 81.7
Cfa014032 Carpinus fangiana HOM05D002849 ORTHO05D007186 2.0e-155 552.7 332 82.8
SGA_v2.0_scaffold19G08599 Striga asiatica HOM05D002849 ORTHO05D007186 5.8e-155 551.2 445 65.8
BcaC08g47111 Brassica carinata HOM05D002849 ORTHO05D007186 5.5e-153 544.7 370 75.1
DCAR_016752 Daucus carota HOM05D002022 ORTHO05D002056 2.7e-152 542.3 321 83.5
Mapoly0148s0040 Marchantia polymorpha HOM05D002849 ORTHO05D007186 1.8e-151 539.7 346 74.0
Sp5g31310 Schrenkiella parvula HOM05D002849 ORTHO05D007186 9.6e-150 533.9 360 76.7
Pp3c27_3320 Physcomitrium patens HOM05D002849 ORTHO05D007186 2.8e-149 532.3 348 73.0
SMO118G0346 Selaginella moellendorffii HOM05D002849 ORTHO05D007186 2.8e-149 532.3 339 73.7
COL.COLO4_21615 Corchorus olitorius HOM05D002849 ORTHO05D007186 3.4e-147 525.4 359 75.8
EL10Ac2g04301 Beta vulgaris HOM05D002849 ORTHO05D007186 1.9e-145 519.6 355 75.2
MD15G1004300 Malus domestica HOM05D002849 ORTHO05D007186 2.7e-144 515.8 368 72.3
Lalb_Chr23g0264921 Lupinus albus HOM05D002849 ORTHO05D007186 1.1e-142 510.4 387 67.7
VMungo1309G1771 Vigna mungo HOM05D002849 ORTHO05D007186 1.4e-140 503.4 358 70.4
arahy.Tifrunner.gnm1.ann1.D80FKX Arachis hypogaea HOM05D002849 ORTHO05D007186 1.0e-138 497.3 350 72.0
BolC6t40052H Brassica oleracea HOM05D002849 ORTHO05D007186 8.5e-138 494.2 361 71.5
CBR_g55299 Chara braunii HOM05D002849 ORTHO05D007186 1.1e-137 493.8 324 71.0
BcaC08g47284 Brassica carinata HOM05D002849 ORTHO05D007186 1.0e-135 487.3 361 70.6
Cre16.g666100 Chlamydomonas reinhardtii HOM05D002849 ORTHO05D007186 5.7e-134 481.5 306 73.5
TPR.G36468 Trifolium pratense HOM05D002849 ORTHO05D007186 1.4e-127 460.3 294 76.5
AagrBONN_evm.TU.Sc2ySwM_344.4630 Anthoceros agrestis HOM05D002849 ORTHO05D007186 2.0e-126 456.4 257 84.0
AUR62013834 Chenopodium quinoa HOM05D002849 ORTHO05D007186 5.9e-123 444.9 353 65.4
Cpa.g.sc26.233 Carica papaya HOM05D002849 ORTHO05D007186 7.2e-121 438.0 354 65.3
Haze_27194 Corylus avellana HOM05D002849 ORTHO05D007186 9.4e-121 437.6 325 63.1
SHI05854 Sapria himalayana HOM05D002849 ORTHO05D007186 9.4e-121 437.6 351 64.4
RcHm_v2.0_Chr6g0303961 Rosa chinensis HOM05D002849 ORTHO05D007186 8.8e-119 431.0 226 91.2
HanXRQChr17g0533361 Helianthus annuus HOM05D002849 ORTHO05D007186 1.4e-116 423.7 221 91.9
PRCOL_00001104 Prasinoderma coloniale HOM05D002849 ORTHO05D007186 9.1e-116 421.0 325 63.1
AT1G76170 Arabidopsis thaliana HOM05D002849 ORTHO05D007186 4.5e-115 418.7 239 84.9
Solyc08g074590.2 Solanum lycopersicum HOM05D002849 ORTHO05D007186 1.5e-113 413.7 223 87.9
Sopen08g023190 Solanum pennellii HOM05D002849 ORTHO05D007186 1.5e-113 413.7 223 87.9
TAR628G0269 Trochodendron aralioides HOM05D002849 ORTHO05D007186 2.5e-113 412.9 230 89.6
HPP92_024246 Vanilla planifolia HOM05D002849 ORTHO05D007186 9.4e-113 411.0 240 83.8
ATR0661G072 Amborella trichopoda HOM05D002849 ORTHO05D007186 4.7e-112 408.7 229 85.6
Peaxi162Scf00166g00641 Petunia axillaris HOM05D002849 ORTHO05D007186 1.2e-110 404.1 230 85.7
CARHR139450 Cardamine hirsuta HOM05D002849 ORTHO05D007186 5.7e-110 401.7 212 90.1
AUR62036771 Chenopodium quinoa HOM05D002849 ORTHO05D007186 5.7e-110 401.7 322 65.8
Nitab4.5_0000907g0040 Nicotiana tabacum HOM05D002849 ORTHO05D007186 2.4e-108 396.4 352 62.2
Cfa027047 Carpinus fangiana HOM05D002849 ORTHO05D007186 1.9e-97 360.1 421 47.3
Ah.01g004180 Amaranthus hybridus HOM05D002849 ORTHO05D007186 8.6e-82 308.1 218 71.1
Psat5g001160 Pisum sativum HOM05D002849 ORTHO05D007186 1.9e-68 263.8 196 69.4
Lj9A176T24 Lonicera japonica HOM05D002849 ORTHO05D007186 2.0e-62 243.8 212 63.2
Peaxi162Scf00445g00105 Petunia axillaris HOM05D002849 ORTHO05D007186 1.7e-61 240.7 358 43.3
VMungo1309G1925 Vigna mungo HOM05D002849 ORTHO05D007186 1.5e-57 227.6 270 49.6
CARHR139440 Cardamine hirsuta HOM05D002849 ORTHO05D007186 1.3e-53 214.5 130 79.2
HanXRQChr17g0533371 Helianthus annuus HOM05D002849 ORTHO05D007186 8.1e-48 195.3 117 82.1
Peaxi162Scf00166g00633 Petunia axillaris HOM05D002849 ORTHO05D007186 6.9e-47 192.2 114 80.7
ATR0661G077 Amborella trichopoda HOM05D002849 ORTHO05D007186 7.1e-44 182.2 122 73.0
SalBow6G3808 Salvia bowleyana HOM05D002849 ORTHO05D007186 2.9e-37 160.2 101 77.2
RcHm_v2.0_Chr6g0303951 Rosa chinensis HOM05D002849 ORTHO05D007186 8.4e-37 158.7 94 79.8
Prupe.3G237200 Prunus persica HOM05D002849 ORTHO05D007186 1.9e-36 157.5 83 88.0
SpUn0523_0010 Schrenkiella parvula HOM05D002849 ORTHO05D007186 3.0e-34 150.2 121 67.8
FAN08G3136 Fragaria x ananassa HOM05D002849 ORTHO05D007186 3.2e-28 130.2 77 85.7
MELO3C004787.2 Cucumis melo HOM05D002849 ORTHO05D007186 1.5e-25 121.3 94 64.9
Gorai.007G371200 Gossypium raimondii HOM05D002849 ORTHO05D047384 1.8e-23 114.4 70 74.3
MELO3C012882.2 Cucumis melo HOM05D002849 ORTHO05D007186 2.0e-22 110.9 78 66.7
Gohir.D11G341150 Gossypium hirsutum HOM05D002849 ORTHO05D047384 7.7e-22 109.0 75 69.3
MELO3C034170.2 Cucumis melo HOM05D002849 ORTHO05D007186 5.7e-17 92.8 58 69.0
MELO3C003855.2 Cucumis melo HOM05D002849 ORTHO05D007186 8.2e-16 89.0 60 71.7
BolC5t33314H Brassica oleracea HOM05D002849 ORTHO05D024297 4.2e-12 76.6 77 53.2
TAR276G0001 Trochodendron aralioides HOM05D002849 ORTHO05D051491 5.5e-12 76.3 54 70.4
C05p45940 Brassica napus HOM05D002849 ORTHO05D024297 2.1e-11 74.3 83 49.4
Actinidia17029 Actinidia chinensis HOM05D000148 ORTHO05D000081 2.0e-09 67.8 31 93.5
AL7G13010 Arabidopsis lyrata HOM05D002849 ORTHO05D007186 2.0e-09 67.8 34 79.4
BcaB01g01492 Brassica carinata HOM05D002849 ORTHO05D027174 3.7e-08 63.5 44 68.2
A05p30360 Brassica napus HOM05D002849 ORTHO05D024297 9.1e-07 58.9 38 71.1
BraA05t21874Z Brassica rapa HOM05D002849 ORTHO05D024297 9.1e-07 58.9 38 71.1


User provided reference genes

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