Gene: FAN20G1564

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN20G1564
  • Transcript Identifier FAN20G1564.1
  • Gene Type Coding gene
  • Location Fvb2-3 : 4304682-4313700 : negative

Gene Family Information

  • ID HOM05D002849
  • #Genes/#Species 243/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id maker-Fvb2-3-augustus-gene-43.69.v1.0.a1
  • pacid 50563842

Descriptions

  • Description KOG2840 - Uncharacterized conserved protein with similarity to predicted ATPase of the PP-loop superfamily
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080157
ISO
PLAZA Integrative Orthologyregulation of plant-type cell wall organization or biogenesis AT2G44270
GO:0002098
ISO
PLAZA Homology (enrichment)tRNA wobble uridine modification HOM05D002849
GO:0000302
ISO
PLAZA Integrative Orthologyresponse to reactive oxygen species AT2G44270
GO:0034227
ISO
PLAZA Homology (enrichment)tRNA thio-modification HOM05D002849

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0000049
ISO
PLAZA Homology (enrichment)tRNA binding HOM05D002849

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal
IPR019956 Ubiquitin domain
IPR000626 Ubiquitin-like domain
IPR029071 Ubiquitin-like domain superfamily
IPR032442 Cytoplasmic tRNA 2-thiolation protein 1, C-terminal
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
Mapman id Description
16.5.5.1.4.1 RNA processing.RNA modification.thiolation.CTU1-URM1 pathway.CTU1-CTU2 tRNA thiouridylase complex.component CTU1