Gene: AUR62036771

General Information

Structural Information

Species Chenopodium quinoa
Gene Identifier AUR62036771
Transcript Identifier AUR62036771-RA
Gene Type Coding gene
Location C_Quinoa_Scaffold_3541 : 1963393-1973944 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002849
#Genes/#Species 243/98
Phylogenetic origin

ID ORTHO05D007186
#Genes/#Species 133/90
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

id AUR62036771.v1.0
pacid 36294761
uniprot A0A803MX41

Descriptions

Short descriptions
Ortholog descriptions

Description NCS6: Cytoplasmic tRNA 2-thiolation protein 1

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0002098	IEA	GOA Database	tRNA wobble uridine modification
GO:0002098	IEA	InterPro	tRNA wobble uridine modification
GO:0034227	IEA	GOA Database	tRNA thio-modification
GO:0034227	IEA	InterPro	tRNA thio-modification
GO:0080157	ISO	PLAZA Integrative Orthology	regulation of plant-type cell wall organization or biogenesis	AT2G44270
GO:0000302	ISO	PLAZA Integrative Orthology	response to reactive oxygen species	AT2G44270

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000049	IEA	GOA Database	tRNA binding
GO:0000049	IEA	InterPro	tRNA binding

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036691	Endonuclease/exonuclease/phosphatase superfamily
IPR032442	Cytoplasmic tRNA 2-thiolation protein 1, C-terminal
IPR011063	tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
IPR000541	Cytoplasmic tRNA 2-thiolation protein 1

Mapman id	Description
16.5.5.1.4.1	RNA processing.RNA modification.thiolation.CTU1-URM1 pathway.CTU1-CTU2 tRNA thiouridylase complex.component CTU1