Gene: THA.LOC104811452
General Information
Structural Information
- Species Tarenaya hassleriana
- Gene Identifier THA.LOC104811452
- Transcript Identifier THA.XM_010538145.2
- Gene Type Coding gene
- Location NW_010965372.1 : 778375-781031 : negative
Gene Family Information
- ID HOM05D002849
- #Genes/#Species 243/98
- Phylogenetic origin
- ID ORTHO05D007186
- #Genes/#Species 133/90
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- GeneID 104811452
- RefSeq XM_010538145.2
- RefSeq XP_010536447.1
- tid rna13879
- id gene9101
- gene LOC104811452
Descriptions
- Description cytoplasmic tRNA 2-thiolation protein 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0002098 | IEA | InterPro | tRNA wobble uridine modification | |
| GO:0034227 | IEA | InterPro | tRNA thio-modification | |
| GO:0008033 | IEA | InterPro | tRNA processing | |
| GO:0080157 | ISO | PLAZA Integrative Orthology | regulation of plant-type cell wall organization or biogenesis | AT2G44270 |
| GO:0000302 | ISO | PLAZA Integrative Orthology | response to reactive oxygen species | AT2G44270 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000049 | IEA | InterPro | tRNA binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR032442 | Cytoplasmic tRNA 2-thiolation protein 1, C-terminal |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold |
| IPR000541 | Cytoplasmic tRNA 2-thiolation protein 1 |
| IPR011063 | tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal |
| IPR035107 | tRNA thiolation protein, TtcA/Ctu1 type |
| Mapman id | Description |
|---|---|
| 16.5.5.1.4.1 | RNA processing.RNA modification.thiolation.CTU1-URM1 pathway.CTU1-CTU2 tRNA thiouridylase complex.component CTU1 |