Gene: SGA_v2.0_scaffold19G08599

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold19G08599
  • Transcript Identifier SGA_v2.0_scaffold19T08599
  • Gene Type Coding gene
  • Location scaffold19 : 434440-439747 : negative

Gene Family Information

  • ID HOM05D002849
  • #Genes/#Species 243/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Cytoplasmic tRNA 2-thiolation protein 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0002098
IEA
InterProtRNA wobble uridine modification
GO:0034227
IEA
InterProtRNA thio-modification
GO:0080157
ISO
PLAZA Integrative Orthologyregulation of plant-type cell wall organization or biogenesis AT2G44270
GO:0000302
ISO
PLAZA Integrative Orthologyresponse to reactive oxygen species AT2G44270

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000049
IEA
InterProtRNA binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000541 Cytoplasmic tRNA 2-thiolation protein 1
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
IPR032442 Cytoplasmic tRNA 2-thiolation protein 1, C-terminal
IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal
Mapman id Description
16.5.5.1.4.1 RNA processing.RNA modification.thiolation.CTU1-URM1 pathway.CTU1-CTU2 tRNA thiouridylase complex.component CTU1