Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G1277 Trochodendron aralioides HOM05D003686 ORTHO05D004322 9.0e-159 563.5 285 100.0
TAR365G0683 Trochodendron aralioides HOM05D003686 ORTHO05D004322 1.8e-98 363.2 240 79.6
TAR636G2878 Trochodendron aralioides HOM05D003686 ORTHO05D004322 2.9e-96 355.9 231 80.1
Nn2g12370 Nelumbo nucifera HOM05D003686 ORTHO05D004322 8.7e-77 291.2 221 71.9
Nn1g08910 Nelumbo nucifera HOM05D003686 ORTHO05D004322 1.7e-72 276.9 200 73.5
Haze_04804 Corylus avellana HOM05D003686 ORTHO05D004322 2.1e-70 270.0 215 67.9
Gorai.004G053600 Gossypium raimondii HOM05D003686 ORTHO05D004322 9.6e-68 261.2 199 72.4
Aqoxy2G03146 Aquilegia oxysepala HOM05D003686 ORTHO05D004322 1.6e-67 260.4 235 63.8
Gohir.A08G043900 Gossypium hirsutum HOM05D003686 ORTHO05D004322 2.1e-67 260.0 199 71.9
CiPaw.07G099200 Carya illinoinensis HOM05D003686 ORTHO05D004322 1.4e-66 257.3 198 69.7
Manes.01G213100 Manihot esculenta HOM05D003686 ORTHO05D004322 2.4e-66 256.5 200 70.0
QL07p015848 Quercus lobata HOM05D003686 ORTHO05D004322 4.0e-66 255.8 203 68.5
Eucgr.A00286 Eucalyptus grandis HOM05D003686 ORTHO05D004322 5.3e-66 255.4 213 67.1
TWI14G0352 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 9.0e-66 254.6 199 68.3
Gohir.D11G123300 Gossypium hirsutum HOM05D003686 ORTHO05D004322 2.0e-65 253.4 204 66.7
QL04p005272 Quercus lobata HOM05D003686 ORTHO05D004322 2.0e-65 253.4 203 67.0
Glyma.10G021900 Glycine max HOM05D003686 ORTHO05D004322 3.4e-65 252.7 198 66.7
Potri.003G058400 Populus trichocarpa HOM05D003686 ORTHO05D004322 3.4e-65 252.7 200 69.0
Gohir.D08G053600 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.1e-63 247.7 199 69.8
COL.COLO4_08036 Corchorus olitorius HOM05D003686 ORTHO05D004322 9.3e-63 244.6 203 67.0
ATR0706G002 Amborella trichopoda HOM05D003686 ORTHO05D004322 4.6e-62 242.3 237 61.6
QL93p0358_0011 Quercus lobata HOM05D003686 ORTHO05D004322 1.3e-61 240.7 203 66.0
Rhsim13G0017700 Rhododendron simsii HOM05D003686 ORTHO05D004322 3.0e-61 239.6 220 60.9
CANSAT78G2257 Cannabis sativa HOM05D003686 ORTHO05D004322 3.9e-61 239.2 205 66.3
Cpa.g.sc9.157 Carica papaya HOM05D003686 ORTHO05D004322 8.7e-61 238.0 198 65.7
VMungo0720G0802 Vigna mungo HOM05D003686 ORTHO05D004322 1.5e-60 237.3 198 62.6
Lalb_Chr06g0163281 Lupinus albus HOM05D003686 ORTHO05D004322 3.3e-60 236.1 199 64.3
RcHm_v2.0_Chr6g0292481 Rosa chinensis HOM05D003686 ORTHO05D004322 1.6e-59 233.8 201 65.2
PGR031G1643 Punica granatum HOM05D003686 ORTHO05D004322 2.1e-59 233.4 199 66.8
Lalb_Chr02g0143061 Lupinus albus HOM05D003686 ORTHO05D004322 1.4e-58 230.7 199 63.8
Actinidia00703 Actinidia chinensis HOM05D003686 ORTHO05D004322 2.4e-58 229.9 203 62.6
TWI23G0547 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 6.9e-58 228.4 199 63.8
Atru.chr5.1287 Acer truncatum HOM05D003686 ORTHO05D004322 9.0e-58 228.0 204 65.7
Manes.05G068800 Manihot esculenta HOM05D003686 ORTHO05D004322 9.0e-58 228.0 200 65.0
Sabra03G0032800 Salix brachista HOM05D003686 ORTHO05D004322 1.5e-57 227.3 185 69.7
Glyma.02G152300 Glycine max HOM05D003686 ORTHO05D004322 2.0e-57 226.9 198 61.1
Dinv11297 Davidia involucrata HOM05D003686 ORTHO05D004322 2.2e-56 223.4 218 59.6
GSVIVG01011011001 Vitis vinifera HOM05D003686 ORTHO05D004322 2.9e-56 223.0 159 73.6
Ca_10377_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 6.4e-56 221.9 205 61.5
Ca_29655_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 6.4e-56 221.9 205 61.5
Dinv11293 Davidia involucrata HOM05D003686 ORTHO05D004322 6.4e-56 221.9 203 62.1
vmacro17192 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 2.5e-55 219.9 203 61.1
Duzib133G0241 Durio zibethinus HOM05D003686 ORTHO05D004322 4.2e-55 219.2 204 62.3
Gorai.007G132200 Gossypium raimondii HOM05D003686 ORTHO05D004322 5.5e-55 218.8 204 60.3
FAN20G0133 Fragaria x ananassa HOM05D003686 ORTHO05D004322 2.7e-54 216.5 199 61.3
FAN27G0391 Fragaria x ananassa HOM05D003686 ORTHO05D004322 2.7e-54 216.5 199 61.3
Gohir.A11G118400 Gossypium hirsutum HOM05D003686 ORTHO05D004322 3.5e-54 216.1 204 59.3
Ciclev10022350m.g Citrus clementina HOM05D003686 ORTHO05D004322 6.0e-54 215.3 196 63.8
Phvul.007G166600 Phaseolus vulgaris HOM05D003686 ORTHO05D004322 2.3e-53 213.4 198 58.6
FAN15G3346 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.1e-52 211.1 202 60.4
Sed0010038 Sechium edule HOM05D003686 ORTHO05D004322 3.3e-52 209.5 197 66.0
TPR.G15798 Trifolium pratense HOM05D003686 ORTHO05D004322 3.3e-52 209.5 203 58.1
Lj1g0025208 Lotus japonicus HOM05D003686 ORTHO05D004322 5.6e-52 208.8 201 60.2
Eucgr.B02749 Eucalyptus grandis HOM05D003686 ORTHO05D004322 7.4e-52 208.4 198 60.6
FvH4_2g24650 Fragaria vesca HOM05D003686 ORTHO05D004322 7.4e-52 208.4 199 59.8
Lj5g0005016 Lotus japonicus HOM05D003686 ORTHO05D004322 9.6e-52 208.0 203 57.1
Lsat_1_v5_gn_5_188760 Lactuca sativa HOM05D003686 ORTHO05D004322 1.4e-50 204.1 227 55.9
Cfa010467 Carpinus fangiana HOM05D003686 ORTHO05D004322 4.0e-50 202.6 124 83.1
DCAR_007018 Daucus carota HOM05D003686 ORTHO05D004322 9.0e-50 201.4 218 60.1
Ca_09109_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 1.2e-49 201.1 180 63.3
DCAR_012430 Daucus carota HOM05D003686 ORTHO05D004322 2.6e-49 199.9 200 59.0
ClCG09G006530 Citrullus lanatus HOM05D003686 ORTHO05D004322 7.6e-49 198.4 195 63.1
HanXRQChr11g0330151 Helianthus annuus HOM05D003686 ORTHO05D004322 1.3e-48 197.6 195 61.0
ECA248G2178 Erigeron canadensis HOM05D003686 ORTHO05D004322 4.9e-48 195.7 261 48.7
Solyc01g067830.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 8.4e-48 194.9 186 60.2
MD11G1297300 Malus domestica HOM05D003686 ORTHO05D004322 1.1e-47 194.5 204 56.9
MSTRG.21821 Avicennia marina HOM05D003686 ORTHO05D004322 4.2e-47 192.6 185 56.2
CDE11G0890 Ceratophyllum demersum HOM05D003686 ORTHO05D004322 5.5e-47 192.2 141 73.8
MD03G1275200 Malus domestica HOM05D003686 ORTHO05D004322 5.5e-47 192.2 204 56.4
arahy.Tifrunner.gnm1.ann1.MV1AMG Arachis hypogaea HOM05D003686 ORTHO05D004322 9.3e-47 191.4 198 58.1
Duzib138G0197 Durio zibethinus HOM05D003686 ORTHO05D004322 1.2e-46 191.0 204 57.8
CsaV3_7G028310 Cucumis sativus L. HOM05D003686 ORTHO05D004322 3.5e-46 189.5 200 60.5
HanXRQChr01g0002781 Helianthus annuus HOM05D003686 ORTHO05D004322 3.5e-46 189.5 216 56.5
PSO801G0146 Papaver somniferum HOM05D003686 ORTHO05D004322 3.5e-46 189.5 211 57.8
Thecc.10G102800 Theobroma cacao HOM05D003686 ORTHO05D004322 7.9e-46 188.3 204 55.4
Lj2P1184T34 Lonicera japonica HOM05D003686 ORTHO05D004322 1.3e-45 187.6 185 57.8
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 5.1e-45 185.7 226 51.3
CAN.G185.6 Capsicum annuum HOM05D003686 ORTHO05D004322 8.7e-45 184.9 190 57.9
MELO3C015891.2 Cucumis melo HOM05D003686 ORTHO05D004322 8.7e-45 184.9 200 59.5
FAN24G2968 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.1e-44 184.5 184 58.7
Medtr1g088990 Medicago truncatula HOM05D003686 ORTHO05D004322 1.1e-44 184.5 210 53.3
Os02g0266100 Oryza sativa ssp. japonica HOM05D003686 ORTHO05D004322 5.7e-44 182.2 141 71.6
CiPaw.08G100800 Carya illinoinensis HOM05D003686 ORTHO05D004322 7.4e-44 181.8 198 56.6
Cc01_g20160 Coffea canephora HOM05D003686 ORTHO05D004322 9.7e-44 181.4 220 51.4
ECA247G2101 Erigeron canadensis HOM05D003686 ORTHO05D004322 9.7e-44 181.4 257 48.6
FAN20G1534 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.6e-43 180.6 184 58.2
Prupe.8G251800 Prunus persica HOM05D003686 ORTHO05D004322 1.6e-43 180.6 119 76.5
Migut.N00130 Erythranthe guttata HOM05D003686 ORTHO05D004322 2.8e-43 179.9 198 55.1
Hma1.2p1_0643F.1_g194695 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 3.7e-43 179.5 158 63.3
Hma1.2p1_0643F.1_g194710 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 3.7e-43 179.5 158 63.3
CSS0048633 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 1.8e-42 177.2 238 47.9
Sopen01g029780 Solanum pennellii HOM05D003686 ORTHO05D004322 3.1e-42 176.4 186 57.0
Nitab4.5_0000295g0050 Nicotiana tabacum HOM05D003686 ORTHO05D004322 5.3e-42 175.6 204 53.9
THA.LOC104826011 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 6.9e-42 175.3 202 55.9
THA.LOC104817532 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 2.6e-41 173.3 149 67.1
Psat6g168000 Pisum sativum HOM05D003686 ORTHO05D004322 4.5e-41 172.6 194 57.2
Sopen06g003610 Solanum pennellii HOM05D003686 ORTHO05D004322 4.5e-41 172.6 199 52.8
Hma1.2p1_0643F.1_g194700 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 7.7e-41 171.8 122 73.8
Hma1.2p1_0643F.1_g194711 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 7.7e-41 171.8 122 73.8
Sp6g03160 Schrenkiella parvula HOM05D003686 ORTHO05D004322 1.0e-40 171.4 121 73.6
Solyc06g008860.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 1.0e-40 171.4 198 52.5
unitig_61.g26148 Utricularia gibba HOM05D003686 ORTHO05D004322 1.0e-40 171.4 151 62.9
Sed0008045 Sechium edule HOM05D003686 ORTHO05D004322 2.2e-40 170.2 201 55.7
PSO339G4974 Papaver somniferum HOM05D003686 ORTHO05D004322 2.9e-40 169.9 211 51.2
PGSC0003DMG400021997 Solanum tuberosum HOM05D003686 ORTHO05D004322 2.9e-40 169.9 199 52.3
EL10Ac2g03326 Beta vulgaris HOM05D003686 ORTHO05D004322 3.8e-40 169.5 235 48.1
Nitab4.5_0004238g0080 Nicotiana tabacum HOM05D003686 ORTHO05D004322 3.8e-40 169.5 204 52.9
BcaB05g23688 Brassica carinata HOM05D003686 ORTHO05D004322 8.5e-40 168.3 125 72.0
BcaB05g23689 Brassica carinata HOM05D003686 ORTHO05D004322 8.5e-40 168.3 125 72.0
Thhalv10028986m.g Eutrema salsugineum HOM05D003686 ORTHO05D004322 8.5e-40 168.3 194 55.2
arahy.Tifrunner.gnm1.ann1.TAZ1K7 Arachis hypogaea HOM05D003686 ORTHO05D004322 1.4e-39 167.5 228 49.1
AUR62025901 Chenopodium quinoa HOM05D003686 ORTHO05D004322 2.5e-39 166.8 234 50.0
AUR62025902 Chenopodium quinoa HOM05D003686 ORTHO05D004322 2.5e-39 166.8 234 50.0
Psat3g024960 Pisum sativum HOM05D003686 ORTHO05D004322 3.2e-39 166.4 188 55.3
C03p37160 Brassica napus HOM05D003686 ORTHO05D004322 4.2e-39 166.0 131 67.9
CAN.G1006.23 Capsicum annuum HOM05D003686 ORTHO05D004322 4.2e-39 166.0 206 50.5
HPP92_021461 Vanilla planifolia HOM05D003686 ORTHO05D004322 4.2e-39 166.0 187 57.2
CARHR251560 Cardamine hirsuta HOM05D003686 ORTHO05D004322 1.6e-38 164.1 130 66.9
BraA03t12240Z Brassica rapa HOM05D003686 ORTHO05D004322 2.1e-38 163.7 203 52.2
BolC3t16013H Brassica oleracea HOM05D003686 ORTHO05D004322 2.7e-38 163.3 124 69.4
AT4G03120 Arabidopsis thaliana HOM05D003686 ORTHO05D004322 7.9e-38 161.8 121 70.2
Nitab4.5_0001149g0030 Nicotiana tabacum HOM05D003686 ORTHO05D004322 7.9e-38 161.8 189 54.5
A03p30600 Brassica napus HOM05D003686 ORTHO05D004322 1.8e-37 160.6 201 52.2
Nitab4.5_0001624g0040 Nicotiana tabacum HOM05D003686 ORTHO05D004322 2.3e-37 160.2 189 53.4
Zm00001eb203990 Zea mays HOM05D003686 ORTHO05D004322 3.9e-37 159.5 264 44.3
Mapoly0087s0074 Marchantia polymorpha HOM05D003686 ORTHO05D004322 5.1e-37 159.1 192 53.1
vmacro14959 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 6.7e-37 158.7 212 50.0
BcaB01g02510 Brassica carinata HOM05D003686 ORTHO05D004322 8.8e-37 158.3 113 71.7
BcaC01g06704 Brassica carinata HOM05D003686 ORTHO05D004322 1.1e-36 157.9 113 71.7
BraA02t07500Z Brassica rapa HOM05D003686 ORTHO05D004322 1.1e-36 157.9 151 63.6
AUR62029649 Chenopodium quinoa HOM05D003686 ORTHO05D004322 2.5e-36 156.8 234 48.7
Medtr7g107640 Medicago truncatula HOM05D003686 ORTHO05D004322 2.5e-36 156.8 185 52.4
SGA_v2.0_scaffold36G14363 Striga asiatica HOM05D003686 ORTHO05D004322 3.3e-36 156.4 158 58.9
Ah.12g061550 Amaranthus hybridus HOM05D003686 ORTHO05D004322 9.7e-36 154.8 237 49.4
BolC9t53184H Brassica oleracea HOM05D003686 ORTHO05D004322 2.2e-35 153.7 198 52.0
BcaB01g01979 Brassica carinata HOM05D003686 ORTHO05D004322 2.8e-35 153.3 196 52.6
Lj3A810T51 Lonicera japonica HOM05D003686 ORTHO05D004322 2.8e-35 153.3 177 53.7
Mapoly0103s0046 Marchantia polymorpha HOM05D003686 ORTHO05D004322 2.8e-35 153.3 229 51.1
PGSC0003DMG400022854 Solanum tuberosum HOM05D003686 ORTHO05D004322 4.8e-35 152.5 191 52.4
BcaC03g16209 Brassica carinata HOM05D003686 ORTHO05D004322 4.1e-34 149.4 171 56.1
BolC2t10013H Brassica oleracea HOM05D003686 ORTHO05D004322 5.3e-34 149.1 172 56.4
A09p02440 Brassica napus HOM05D003686 ORTHO05D004322 6.9e-34 148.7 198 51.5
BraA09t35891Z Brassica rapa HOM05D003686 ORTHO05D004322 6.9e-34 148.7 198 51.5
Peaxi162Scf01364g00015 Petunia axillaris HOM05D003686 ORTHO05D004322 3.4e-33 146.4 109 67.9
SGA_v2.0_scaffold172G39059 Striga asiatica HOM05D003686 ORTHO05D004322 3.4e-33 146.4 221 47.1
SalBow6G6913 Salvia bowleyana HOM05D003686 ORTHO05D004322 1.0e-32 144.8 185 53.5
Sc25g0004660 Simmondsia chinensis HOM05D003686 ORTHO05D004322 1.3e-32 144.4 236 45.8
COL.COLO4_34092 Corchorus olitorius HOM05D003686 ORTHO05D004322 2.2e-32 143.7 132 60.6
Pp3c12_26180 Physcomitrium patens HOM05D003686 ORTHO05D004322 3.8e-32 142.9 126 63.5
CSS0007511 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 5.0e-32 142.5 122 63.1
CSS0037271 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 5.0e-32 142.5 122 63.1
Pp3c4_170 Physcomitrium patens HOM05D003686 ORTHO05D004322 6.5e-32 142.1 126 61.9
A02p25120 Brassica napus HOM05D003686 ORTHO05D004322 1.9e-31 140.6 198 49.5
SalBow8G5349 Salvia bowleyana HOM05D003686 ORTHO05D004322 4.7e-30 136.0 176 53.4
Carub.0006s3393 Capsella rubella HOM05D003686 ORTHO05D004322 1.8e-29 134.0 199 46.2
SGA_v2.0_scaffold89G27564 Striga asiatica HOM05D003686 ORTHO05D004322 1.8e-29 134.0 263 39.9
MSTRG.12592 Avicennia marina HOM05D003686 ORTHO05D004322 4.4e-28 129.4 130 57.7
AagrBONN_evm.TU.Sc2ySwM_228.930 Anthoceros agrestis HOM05D003686 ORTHO05D004322 7.4e-28 128.6 81 77.8
Migut.N02118 Erythranthe guttata HOM05D003686 ORTHO05D004322 7.4e-28 128.6 120 62.5
Migut.O00643 Erythranthe guttata HOM05D003686 ORTHO05D004322 7.4e-28 128.6 120 62.5
Peaxi162Scf00936g00218 Petunia axillaris HOM05D003686 ORTHO05D004322 1.3e-27 127.9 168 50.6
QL07p015856 Quercus lobata HOM05D003686 ORTHO05D004322 2.8e-27 126.7 193 46.1
vmacro14957 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 3.7e-27 126.3 179 49.7
Hund24902 Selenicereus undatus HOM05D003686 ORTHO05D004322 6.3e-27 125.6 221 42.1
QL93p0358_0018 Quercus lobata HOM05D003686 ORTHO05D004322 1.4e-26 124.4 193 45.6
Oeu022800.1 Olea europaea HOM05D003686 ORTHO05D004322 1.5e-25 120.9 105 62.9
Oeu022802.1 Olea europaea HOM05D003686 ORTHO05D004322 1.5e-25 120.9 105 62.9
C09p02540 Brassica napus HOM05D003686 ORTHO05D004322 1.7e-24 117.5 181 48.6
HPP92_021468 Vanilla planifolia HOM05D003686 ORTHO05D004322 8.5e-24 115.2 81 72.8
vmacro02511 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 2.5e-23 113.6 188 44.1
Psat3g182400 Pisum sativum HOM05D003686 ORTHO05D004322 3.2e-23 113.2 60 86.7
unitig_22.g6331 Utricularia gibba HOM05D003686 ORTHO05D004322 9.4e-23 111.7 152 50.7
Peaxi162Scf01067g00002 Petunia axillaris HOM05D003686 ORTHO05D004322 1.2e-22 111.3 111 58.6
Psat0s3642g0040 Pisum sativum HOM05D000068 ORTHO05D025728 2.1e-22 110.5 60 88.3
Duzib211G0369 Durio zibethinus HOM05D003686 ORTHO05D004322 3.3e-20 103.2 132 50.0
Cre09.g401300 Chlamydomonas reinhardtii HOM05D003686 ORTHO05D004322 2.0e-12 77.4 39 82.1
Lj5g0006065 Lotus japonicus HOM05D003686 ORTHO05D004322 2.8e-11 73.6 75 49.3
Lj5g0025755 Lotus japonicus HOM05D003686 ORTHO05D009933 1.4e-10 71.2 63 63.5
PSO384G1591 Papaver somniferum HOM05D000185 ORTHO05D000105 1.8e-10 70.9 210 38.1
CSS0028767 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 3.1e-10 70.1 77 54.5
CSS0035418 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 3.1e-10 70.1 77 54.5
PSO384G1636 Papaver somniferum HOM05D000185 ORTHO05D000105 7.7e-09 65.5 210 37.1
PSO384G1681 Papaver somniferum HOM05D003686 ORTHO05D004322 1.0e-08 65.1 83 51.8
PSO384G1563 Papaver somniferum HOM05D003686 ORTHO05D004322 8.5e-08 62.0 130 43.8
Aa31LG5G2650 Aethionema arabicum HOM05D003686 ORTHO05D004322 1.9e-07 60.8 112 40.2
PRCOL_00005459 Prasinoderma coloniale HOM05D003686 ORTHO05D004322 1.6e-06 57.8 39 64.1


User provided reference genes

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