Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g004170 Solanum pennellii HOM05D006329 ORTHO05D008357 5.9e-169 597.4 299 100.0
Solyc11g008360.3 Solanum lycopersicum HOM05D006329 ORTHO05D008357 3.8e-168 594.7 299 99.7
PGSC0003DMG400007434 Solanum tuberosum HOM05D006329 ORTHO05D008357 1.2e-166 589.7 299 98.7
Nitab4.5_0001450g0040 Nicotiana tabacum HOM05D006329 ORTHO05D008357 5.7e-156 554.3 299 92.3
Nitab4.5_0001659g0150 Nicotiana tabacum HOM05D006329 ORTHO05D008357 3.7e-155 551.6 299 92.0
Actinidia34805 Actinidia chinensis HOM05D006329 ORTHO05D008357 9.9e-140 500.4 299 82.9
CAN.G321.64 Capsicum annuum HOM05D006329 ORTHO05D008357 1.9e-135 486.1 252 94.4
Cc02_g10940 Coffea canephora HOM05D006329 ORTHO05D008357 1.6e-134 483.0 299 80.3
GSVIVG01016221001 Vitis vinifera HOM05D006329 ORTHO05D008357 9.9e-132 473.8 299 78.6
Atru.chr12.838 Acer truncatum HOM05D003507 ORTHO05D008357 8.4e-131 470.7 274 82.8
Migut.F01702 Erythranthe guttata HOM05D006329 ORTHO05D008357 1.1e-130 470.3 296 79.1
SalBow6G7241 Salvia bowleyana HOM05D006329 ORTHO05D008357 2.4e-130 469.2 300 77.3
Duzib114G0755 Durio zibethinus HOM05D006329 ORTHO05D008357 5.4e-130 468.0 306 74.8
Nn6g35280 Nelumbo nucifera HOM05D006329 ORTHO05D008357 7.1e-130 467.6 274 82.8
Hma1.2p1_2894F.1_g329960 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 9.2e-130 467.2 299 78.3
MELO3C019822.2 Cucumis melo HOM05D006329 ORTHO05D008357 2.1e-129 466.1 291 79.7
Ciclev10031516m.g Citrus clementina HOM05D006329 ORTHO05D008357 2.7e-129 465.7 275 81.5
Gohir.A10G203300 Gossypium hirsutum HOM05D006329 ORTHO05D008357 2.7e-129 465.7 308 74.7
Gohir.D10G211400 Gossypium hirsutum HOM05D006329 ORTHO05D008357 4.6e-129 464.9 308 74.4
Gorai.011G237100 Gossypium raimondii HOM05D006329 ORTHO05D008357 4.6e-129 464.9 308 74.4
QL08p054507 Quercus lobata HOM05D006329 ORTHO05D008357 4.6e-129 464.9 294 77.2
MSTRG.389 Avicennia marina HOM05D006329 ORTHO05D008357 6.0e-129 464.5 296 77.0
Sed0004104 Sechium edule HOM05D006329 ORTHO05D008357 6.0e-129 464.5 299 77.9
Thecc.10G083200 Theobroma cacao HOM05D006329 ORTHO05D008357 1.0e-128 463.8 304 75.3
CsaV3_6G036680 Cucumis sativus L. HOM05D006329 ORTHO05D008357 2.3e-128 462.6 291 79.7
Manes.05G201000 Manihot esculenta HOM05D006329 ORTHO05D008357 3.9e-128 461.8 305 75.4
QL08p054383 Quercus lobata HOM05D006329 ORTHO05D008357 5.1e-128 461.5 294 76.9
Prupe.2G208900 Prunus persica HOM05D006329 ORTHO05D008357 8.7e-128 460.7 294 77.9
TAR623G1379 Trochodendron aralioides HOM05D006329 ORTHO05D008357 8.7e-128 460.7 299 77.3
Peaxi162Scf00145g01311 Petunia axillaris HOM05D006329 ORTHO05D008357 1.9e-127 459.5 260 88.1
Rhsim09G0148200 Rhododendron simsii HOM05D000461 ORTHO05D001829 2.5e-127 459.1 277 80.5
MD07G1170000 Malus domestica HOM05D006329 ORTHO05D008357 3.3e-127 458.8 296 76.7
PGR142G3823 Punica granatum HOM05D006329 ORTHO05D008357 3.3e-127 458.8 299 76.3
Sabra08G0023700 Salix brachista HOM05D006329 ORTHO05D008357 1.6e-126 456.4 299 76.6
CANSAT56G2601 Cannabis sativa HOM05D006329 ORTHO05D008357 2.1e-126 456.1 299 74.9
FvH4_7g18810 Fragaria vesca HOM05D006329 ORTHO05D008357 2.1e-126 456.1 298 76.2
FAN03G2323 Fragaria x ananassa HOM05D003507 ORTHO05D004324 2.1e-126 456.1 298 76.2
FAN10G3782 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.8e-126 455.7 298 75.8
Potri.008G035500 Populus trichocarpa HOM05D006329 ORTHO05D008357 2.8e-126 455.7 299 75.6
Thhalv10016747m.g Eutrema salsugineum HOM05D006329 ORTHO05D008357 4.7e-126 454.9 307 72.3
COL.COLO4_17136 Corchorus olitorius HOM05D006329 ORTHO05D008357 6.2e-126 454.5 304 74.7
HanXRQChr14g0456591 Helianthus annuus HOM05D006329 ORTHO05D008357 8.1e-126 454.1 295 77.6
THA.LOC104824234 Tarenaya hassleriana HOM05D006329 ORTHO05D008357 8.1e-126 454.1 270 79.3
Eucgr.G02867 Eucalyptus grandis HOM05D006329 ORTHO05D008357 1.4e-125 453.4 272 79.4
AL4G36440 Arabidopsis lyrata HOM05D006329 ORTHO05D008357 1.8e-125 453.0 272 77.6
FAN06G3910 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.8e-125 453.0 298 75.8
BcaB02g09141 Brassica carinata HOM05D006329 ORTHO05D008357 3.1e-125 452.2 302 73.5
Ah.02g128110 Amaranthus hybridus HOM05D006329 ORTHO05D008357 5.2e-125 451.4 296 74.7
Lsat_1_v5_gn_2_113040 Lactuca sativa HOM05D006329 ORTHO05D008357 1.2e-124 450.3 297 76.1
Aqoxy1G01144 Aquilegia oxysepala HOM05D006329 ORTHO05D008357 4.4e-124 448.4 295 74.9
Carub.0004s2119 Capsella rubella HOM05D006329 ORTHO05D008357 4.4e-124 448.4 273 77.7
RcHm_v2.0_Chr1g0362601 Rosa chinensis HOM05D006329 ORTHO05D008357 4.4e-124 448.4 299 75.3
AT2G39140 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 5.8e-124 448.0 272 76.8
FAN10G0068 Fragaria x ananassa HOM05D006329 ORTHO05D008357 9.9e-124 447.2 298 75.2
MBI18_g02633_MAGBIO Magnolia biondii HOM05D006329 ORTHO05D008357 1.3e-123 446.8 295 75.6
EL10Ac6g14260 Beta vulgaris HOM05D006329 ORTHO05D008357 2.9e-123 445.7 298 72.8
Sp4g21490 Schrenkiella parvula HOM05D006329 ORTHO05D008357 2.9e-123 445.7 271 77.1
CARHR133910 Cardamine hirsuta HOM05D006329 ORTHO05D008357 3.8e-123 445.3 268 78.0
CiPaw.01G268700 Carya illinoinensis HOM05D006329 ORTHO05D008357 3.8e-123 445.3 295 73.9
ClCG08G007690 Citrullus lanatus HOM05D006329 ORTHO05D008357 3.8e-123 445.3 278 80.2
arahy.Tifrunner.gnm1.ann1.KFTR8M Arachis hypogaea HOM05D006329 ORTHO05D008357 4.9e-123 444.9 310 72.9
Ca_10544_v3 Cicer arietinum L. HOM05D006329 ORTHO05D008357 2.4e-122 442.6 301 72.4
SGA_v2.0_scaffold51G18714 Striga asiatica HOM05D006329 ORTHO05D008357 4.2e-122 441.8 281 77.6
Glyma.10G207800 Glycine max HOM05D006329 ORTHO05D008357 9.3e-122 440.7 309 71.8
Phvul.007G098900 Phaseolus vulgaris HOM05D006329 ORTHO05D008357 9.3e-122 440.7 305 71.8
BraA05t19681Z Brassica rapa HOM05D006329 ORTHO05D008357 1.6e-121 439.9 260 80.0
A05p07160 Brassica napus HOM05D006329 ORTHO05D008357 2.1e-121 439.5 260 79.6
Haze_16856 Corylus avellana HOM05D006329 ORTHO05D008357 3.5e-121 438.7 285 74.0
BcaC02g12042 Brassica carinata HOM05D006329 ORTHO05D008357 4.6e-121 438.3 260 79.2
C04p08570 Brassica napus HOM05D006329 ORTHO05D008357 4.6e-121 438.3 260 79.2
BolC4t22452H Brassica oleracea HOM05D006329 ORTHO05D008357 4.6e-121 438.3 260 79.2
Medtr1g094190 Medicago truncatula HOM05D006329 ORTHO05D008357 7.8e-121 437.6 306 71.9
Oeu013841.1 Olea europaea HOM05D006329 ORTHO05D008357 2.3e-120 436.0 261 81.2
TPR.G10288 Trifolium pratense HOM05D006329 ORTHO05D008357 3.0e-120 435.6 304 71.4
Lj5g0015116 Lotus japonicus HOM05D006329 ORTHO05D008357 3.9e-120 435.3 270 77.4
Psat6g180040 Pisum sativum HOM05D006329 ORTHO05D008357 1.6e-118 429.9 303 70.3
Lalb_Chr21g0313671 Lupinus albus HOM05D006329 ORTHO05D008357 3.6e-118 428.7 277 73.6
vmacro04842 Vaccinium macrocarpon HOM05D006329 ORTHO05D008357 1.8e-117 426.4 269 77.7
FAN06G0494 Fragaria x ananassa HOM05D006329 ORTHO05D008357 4.0e-117 425.2 303 71.9
EL10Ac4g09587 Beta vulgaris HOM05D006329 ORTHO05D008357 5.3e-117 424.9 312 68.3
CDE03G0204 Ceratophyllum demersum HOM05D006329 ORTHO05D008357 4.5e-116 421.8 290 73.4
PSO339G5012 Papaver somniferum HOM05D006329 ORTHO05D008357 7.6e-116 421.0 294 71.4
ECA238G1295 Erigeron canadensis HOM05D006329 ORTHO05D001676 1.7e-115 419.9 248 82.3
arahy.Tifrunner.gnm1.ann1.21BGD2 Arachis hypogaea HOM05D006329 ORTHO05D008357 2.9e-115 419.1 300 71.7
Cpa.g.sc53.128 Carica papaya HOM05D006329 ORTHO05D008357 3.8e-115 418.7 262 79.8
PSO063G6532 Papaver somniferum HOM05D006329 ORTHO05D008357 3.8e-115 418.7 294 71.4
Cfa001679 Carpinus fangiana HOM05D006329 ORTHO05D008357 1.1e-114 417.2 283 71.7
DCAR_005490 Daucus carota HOM05D006329 ORTHO05D008357 5.4e-114 414.8 258 81.0
ATR0219G015 Amborella trichopoda HOM05D006329 ORTHO05D008357 5.6e-111 404.8 278 73.7
CSS0005771 Camellia sinensis var. sinensis HOM05D006329 ORTHO05D008357 2.1e-110 402.9 299 69.6
Hund20700 Selenicereus undatus HOM05D006329 ORTHO05D008357 6.2e-110 401.4 368 59.2
Zm00001eb004240 Zea mays HOM05D006329 ORTHO05D008357 1.4e-109 400.2 280 72.1
VMungo0251G3605 Vigna mungo HOM05D006329 ORTHO05D008357 3.4e-108 395.6 304 66.8
RhsimUnG0185600 Rhododendron simsii HOM05D000461 ORTHO05D001829 3.8e-107 392.1 234 82.1
AUR62002759 Chenopodium quinoa HOM05D006329 ORTHO05D008357 1.1e-106 390.6 257 75.1
HPP92_027741 Vanilla planifolia HOM05D006329 ORTHO05D008357 4.3e-103 378.6 294 67.7
HPP92_026018 Vanilla planifolia HOM05D006329 ORTHO05D008357 7.4e-103 377.9 295 67.8
Dinv31231 Davidia involucrata HOM05D006329 ORTHO05D008357 1.6e-97 360.1 221 81.9
Lj3A938T44 Lonicera japonica HOM05D006329 ORTHO05D008357 6.0e-97 358.2 283 70.3
Mapoly0002s0007 Marchantia polymorpha HOM05D006329 ORTHO05D008357 8.2e-94 347.8 267 62.5
Lalb_Chr21g0313541 Lupinus albus HOM05D006329 ORTHO05D008357 1.0e-91 340.9 209 75.1
Os03g0152700 Oryza sativa ssp. japonica HOM05D006329 ORTHO05D008357 1.7e-91 340.1 271 64.9
Pp3c7_13640 Physcomitrium patens HOM05D006329 ORTHO05D008357 9.1e-85 317.8 295 55.9
SMO329G0071 Selaginella moellendorffii HOM05D006329 ORTHO05D008357 1.9e-82 310.1 252 59.9
Aa31LG5G20460 Aethionema arabicum HOM05D006329 ORTHO05D008357 1.1e-77 294.3 265 59.2
Sc09g0006060 Simmondsia chinensis HOM05D006329 ORTHO05D008357 1.1e-77 294.3 193 76.2
Cfa001678 Carpinus fangiana HOM05D006329 ORTHO05D008357 1.2e-73 280.8 164 80.5
FAN01G2166 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.6e-73 280.4 191 74.9
HPP92_026744 Vanilla planifolia HOM05D006329 ORTHO05D008357 5.7e-63 245.4 260 55.8
MCO14G528 Micromonas commoda HOM05D006329 ORTHO05D008357 3.0e-56 223.0 257 47.5
CBR_g29624 Chara braunii HOM05D006329 ORTHO05D008357 5.0e-51 205.7 162 61.1
AUR62014125 Chenopodium quinoa HOM05D006329 ORTHO05D008357 4.7e-49 199.1 139 72.7
Cre02.g095121 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 6.3e-46 188.7 324 36.7
PRCOL_00004574 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 3.5e-44 183.0 253 41.9
CAN.G176.13 Capsicum annuum HOM05D006329 ORTHO05D033978 6.0e-36 155.6 83 88.0
Hma1.2p1_2894F.1_g329970 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 8.0e-33 145.2 82 81.7
Pp3s196_90 Physcomitrium patens HOM05D006329 ORTHO05D008357 1.9e-26 124.0 247 30.4
AT3G43340 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 1.4e-21 107.8 73 68.5
Hma1.2p1_2894F.1_g329973 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 1.3e-19 101.3 57 80.7
CAN.G184.4 Capsicum annuum HOM05D006329 ORTHO05D028485 1.6e-17 94.4 68 67.6
Cre07.g323550 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 1.4e-16 91.3 229 28.4
Glyma.20G182966 Glycine max HOM05D006329 ORTHO05D028485 2.4e-16 90.5 88 52.3
MCO04G216 Micromonas commoda HOM05D006329 ORTHO05D008357 1.1e-13 81.6 260 27.7
Potri.010G226901 Populus trichocarpa HOM05D006329 ORTHO05D028485 9.2e-13 78.6 51 76.5


User provided reference genes

Program Settings