Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g008360.3 Solanum lycopersicum HOM05D006329 ORTHO05D008357 1.6e-225 785.8 415 100.0
PGSC0003DMG400007434 Solanum tuberosum HOM05D006329 ORTHO05D008357 7.9e-212 740.3 415 93.7
Nitab4.5_0001450g0040 Nicotiana tabacum HOM05D006329 ORTHO05D008357 1.1e-197 693.3 416 86.1
Nitab4.5_0001659g0150 Nicotiana tabacum HOM05D006329 ORTHO05D008357 6.0e-196 687.6 416 85.6
Sopen11g004170 Solanum pennellii HOM05D006329 ORTHO05D008357 2.4e-168 595.9 299 99.7
Peaxi162Scf00145g01311 Petunia axillaris HOM05D006329 ORTHO05D008357 3.6e-164 582.0 379 80.2
Cc02_g10940 Coffea canephora HOM05D006329 ORTHO05D008357 6.1e-164 581.3 421 72.4
Actinidia34805 Actinidia chinensis HOM05D006329 ORTHO05D008357 1.5e-162 576.6 417 72.7
Hma1.2p1_2894F.1_g329960 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 7.2e-157 557.8 418 70.6
Migut.F01702 Erythranthe guttata HOM05D006329 ORTHO05D008357 4.8e-153 545.0 417 69.1
MSTRG.389 Avicennia marina HOM05D006329 ORTHO05D008357 3.1e-152 542.3 414 67.6
SalBow6G7241 Salvia bowleyana HOM05D006329 ORTHO05D008357 3.1e-152 542.3 417 69.1
TAR623G1379 Trochodendron aralioides HOM05D006329 ORTHO05D008357 2.1e-148 529.6 418 67.2
QL08p054507 Quercus lobata HOM05D006329 ORTHO05D008357 2.3e-147 526.2 393 72.3
Sed0004104 Sechium edule HOM05D006329 ORTHO05D008357 2.3e-147 526.2 379 72.0
Thecc.10G083200 Theobroma cacao HOM05D006329 ORTHO05D008357 5.2e-147 525.0 381 69.8
Gohir.A10G203300 Gossypium hirsutum HOM05D006329 ORTHO05D008357 1.5e-146 523.5 386 68.4
QL08p054383 Quercus lobata HOM05D006329 ORTHO05D008357 2.6e-146 522.7 393 72.0
Oeu013841.1 Olea europaea HOM05D006329 ORTHO05D008357 3.4e-146 522.3 399 68.4
Gohir.D10G211400 Gossypium hirsutum HOM05D006329 ORTHO05D008357 4.4e-146 521.9 386 67.9
Gorai.011G237100 Gossypium raimondii HOM05D006329 ORTHO05D008357 4.4e-146 521.9 386 67.9
Duzib114G0755 Durio zibethinus HOM05D006329 ORTHO05D008357 1.3e-145 520.4 384 70.3
Manes.05G201000 Manihot esculenta HOM05D006329 ORTHO05D008357 2.2e-145 519.6 382 69.9
Nn6g35280 Nelumbo nucifera HOM05D006329 ORTHO05D008357 4.9e-145 518.5 381 70.1
Atru.chr12.838 Acer truncatum HOM05D003507 ORTHO05D008357 6.3e-145 518.1 381 69.8
Sabra08G0023700 Salix brachista HOM05D006329 ORTHO05D008357 6.3e-145 518.1 406 66.7
FAN10G3782 Fragaria x ananassa HOM05D006329 ORTHO05D008357 8.3e-145 517.7 374 70.6
Potri.008G035500 Populus trichocarpa HOM05D006329 ORTHO05D008357 1.1e-144 517.3 406 66.0
Ciclev10031516m.g Citrus clementina HOM05D006329 ORTHO05D008357 2.4e-144 516.2 395 68.4
MELO3C019822.2 Cucumis melo HOM05D006329 ORTHO05D008357 7.0e-144 514.6 337 76.0
COL.COLO4_17136 Corchorus olitorius HOM05D006329 ORTHO05D008357 2.0e-143 513.1 392 67.9
FvH4_7g18810 Fragaria vesca HOM05D006329 ORTHO05D008357 1.0e-142 510.8 411 65.9
Thhalv10016747m.g Eutrema salsugineum HOM05D006329 ORTHO05D008357 1.7e-142 510.0 425 62.1
MD07G1170000 Malus domestica HOM05D006329 ORTHO05D008357 1.7e-142 510.0 390 69.2
FAN10G0068 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.9e-142 509.2 374 70.1
CsaV3_6G036680 Cucumis sativus L. HOM05D006329 ORTHO05D008357 3.8e-142 508.8 337 75.7
FAN06G3910 Fragaria x ananassa HOM05D006329 ORTHO05D008357 5.0e-142 508.4 411 65.9
RcHm_v2.0_Chr1g0362601 Rosa chinensis HOM05D006329 ORTHO05D008357 1.5e-141 506.9 413 66.1
Aqoxy1G01144 Aquilegia oxysepala HOM05D006329 ORTHO05D008357 3.3e-141 505.8 420 63.3
BcaB02g09141 Brassica carinata HOM05D006329 ORTHO05D008357 3.3e-141 505.8 382 66.8
Prupe.2G208900 Prunus persica HOM05D006329 ORTHO05D008357 9.5e-141 504.2 336 75.0
Rhsim09G0148200 Rhododendron simsii HOM05D000461 ORTHO05D001829 1.6e-140 503.4 433 63.3
CANSAT56G2601 Cannabis sativa HOM05D006329 ORTHO05D008357 2.8e-140 502.7 339 73.5
SGA_v2.0_scaffold51G18714 Striga asiatica HOM05D006329 ORTHO05D008357 4.7e-140 501.9 398 67.8
CSS0005771 Camellia sinensis var. sinensis HOM05D006329 ORTHO05D008357 3.0e-139 499.2 417 65.0
PGR142G3823 Punica granatum HOM05D006329 ORTHO05D008357 3.0e-139 499.2 377 68.4
THA.LOC104824234 Tarenaya hassleriana HOM05D006329 ORTHO05D008357 8.9e-139 497.7 424 63.2
Eucgr.G02867 Eucalyptus grandis HOM05D006329 ORTHO05D008357 1.2e-138 497.3 331 73.4
arahy.Tifrunner.gnm1.ann1.KFTR8M Arachis hypogaea HOM05D006329 ORTHO05D008357 2.6e-138 496.1 431 65.7
AL4G36440 Arabidopsis lyrata HOM05D006329 ORTHO05D008357 4.4e-138 495.4 403 62.5
ClCG08G007690 Citrullus lanatus HOM05D006329 ORTHO05D008357 1.7e-137 493.4 313 78.3
CiPaw.01G268700 Carya illinoinensis HOM05D006329 ORTHO05D008357 6.4e-137 491.5 336 72.0
MBI18_g02633_MAGBIO Magnolia biondii HOM05D006329 ORTHO05D008357 8.3e-137 491.1 391 67.0
CAN.G321.64 Capsicum annuum HOM05D006329 ORTHO05D008357 1.8e-136 490.0 252 94.8
CARHR133910 Cardamine hirsuta HOM05D006329 ORTHO05D008357 1.2e-135 487.3 402 62.9
Phvul.007G098900 Phaseolus vulgaris HOM05D006329 ORTHO05D008357 7.8e-135 484.6 342 70.5
Sp4g21490 Schrenkiella parvula HOM05D006329 ORTHO05D008357 7.8e-135 484.6 432 59.7
DCAR_005490 Daucus carota HOM05D006329 ORTHO05D008357 1.0e-134 484.2 373 72.9
AT2G39140 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 1.3e-134 483.8 434 59.9
Carub.0004s2119 Capsella rubella HOM05D006329 ORTHO05D008357 1.3e-134 483.8 432 60.6
Glyma.10G207800 Glycine max HOM05D006329 ORTHO05D008357 2.3e-134 483.0 426 62.4
vmacro04842 Vaccinium macrocarpon HOM05D006329 ORTHO05D008357 2.3e-134 483.0 440 60.9
Haze_16856 Corylus avellana HOM05D006329 ORTHO05D008357 1.1e-133 480.7 347 69.2
FAN06G0494 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.1e-133 480.7 416 63.2
Ca_10544_v3 Cicer arietinum L. HOM05D006329 ORTHO05D008357 1.5e-133 480.3 404 65.1
BraA05t19681Z Brassica rapa HOM05D006329 ORTHO05D008357 7.3e-133 478.0 420 60.5
CDE03G0204 Ceratophyllum demersum HOM05D006329 ORTHO05D008357 2.1e-132 476.5 399 65.2
GSVIVG01016221001 Vitis vinifera HOM05D006329 ORTHO05D008357 2.8e-132 476.1 299 78.6
Cpa.g.sc53.128 Carica papaya HOM05D006329 ORTHO05D008357 4.7e-132 475.3 364 69.2
A05p07160 Brassica napus HOM05D006329 ORTHO05D008357 1.0e-131 474.2 420 60.0
FAN03G2323 Fragaria x ananassa HOM05D003507 ORTHO05D004324 1.4e-131 473.8 308 76.3
arahy.Tifrunner.gnm1.ann1.21BGD2 Arachis hypogaea HOM05D006329 ORTHO05D008357 8.9e-131 471.1 421 64.6
PSO339G5012 Papaver somniferum HOM05D006329 ORTHO05D008357 8.9e-131 471.1 383 64.0
Medtr1g094190 Medicago truncatula HOM05D006329 ORTHO05D008357 2.6e-130 469.5 418 63.4
PSO063G6532 Papaver somniferum HOM05D006329 ORTHO05D008357 3.4e-130 469.2 383 64.0
BolC4t22452H Brassica oleracea HOM05D006329 ORTHO05D008357 1.7e-129 466.8 332 69.0
BcaC02g12042 Brassica carinata HOM05D006329 ORTHO05D008357 2.2e-129 466.5 333 68.8
C04p08570 Brassica napus HOM05D006329 ORTHO05D008357 2.2e-129 466.5 333 68.8
TPR.G10288 Trifolium pratense HOM05D006329 ORTHO05D008357 2.9e-129 466.1 409 63.3
Ah.02g128110 Amaranthus hybridus HOM05D006329 ORTHO05D008357 4.9e-129 465.3 335 68.7
Lj5g0015116 Lotus japonicus HOM05D006329 ORTHO05D008357 8.3e-129 464.5 345 67.8
Psat6g180040 Pisum sativum HOM05D006329 ORTHO05D008357 4.1e-128 462.2 328 69.2
ATR0219G015 Amborella trichopoda HOM05D006329 ORTHO05D008357 3.5e-127 459.1 358 66.8
HanXRQChr14g0456591 Helianthus annuus HOM05D006329 ORTHO05D008357 3.5e-127 459.1 310 75.8
Lsat_1_v5_gn_2_113040 Lactuca sativa HOM05D006329 ORTHO05D008357 6.0e-127 458.4 305 75.7
EL10Ac6g14260 Beta vulgaris HOM05D006329 ORTHO05D008357 7.8e-127 458.0 312 71.8
Lalb_Chr21g0313671 Lupinus albus HOM05D006329 ORTHO05D008357 8.6e-126 454.5 348 65.2
EL10Ac4g09587 Beta vulgaris HOM05D006329 ORTHO05D008357 1.9e-120 436.8 329 66.9
Dinv31231 Davidia involucrata HOM05D006329 ORTHO05D008357 1.9e-120 436.8 339 69.9
Lj3A938T44 Lonicera japonica HOM05D006329 ORTHO05D008357 1.2e-119 434.1 404 63.4
RhsimUnG0185600 Rhododendron simsii HOM05D000461 ORTHO05D001829 4.6e-119 432.2 397 61.2
Hund20700 Selenicereus undatus HOM05D006329 ORTHO05D008357 5.6e-117 425.2 490 50.0
Zm00001eb004240 Zea mays HOM05D006329 ORTHO05D008357 1.6e-116 423.7 395 58.7
ECA238G1295 Erigeron canadensis HOM05D006329 ORTHO05D001676 8.1e-116 421.4 248 82.3
Cfa001679 Carpinus fangiana HOM05D006329 ORTHO05D008357 2.3e-115 419.9 283 71.7
VMungo0251G3605 Vigna mungo HOM05D006329 ORTHO05D008357 7.6e-114 414.8 322 66.5
HPP92_026018 Vanilla planifolia HOM05D006329 ORTHO05D008357 9.9e-114 414.5 368 61.7
AUR62002759 Chenopodium quinoa HOM05D006329 ORTHO05D008357 2.1e-108 396.7 289 69.9
HPP92_027741 Vanilla planifolia HOM05D006329 ORTHO05D008357 6.9e-107 391.7 306 66.7
Os03g0152700 Oryza sativa ssp. japonica HOM05D006329 ORTHO05D008357 6.9e-99 365.2 355 56.1
Mapoly0002s0007 Marchantia polymorpha HOM05D006329 ORTHO05D008357 3.0e-94 349.7 267 62.5
Aa31LG5G20460 Aethionema arabicum HOM05D006329 ORTHO05D008357 4.8e-92 342.4 387 52.7
Lalb_Chr21g0313541 Lupinus albus HOM05D006329 ORTHO05D008357 4.8e-92 342.4 209 75.1
Pp3c7_13640 Physcomitrium patens HOM05D006329 ORTHO05D008357 5.1e-86 322.4 295 56.3
Cfa001678 Carpinus fangiana HOM05D006329 ORTHO05D008357 3.3e-85 319.7 226 70.8
SMO329G0071 Selaginella moellendorffii HOM05D006329 ORTHO05D008357 1.2e-82 311.2 252 59.9
Sc09g0006060 Simmondsia chinensis HOM05D006329 ORTHO05D008357 4.2e-80 302.8 295 58.6
FAN01G2166 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.0e-73 281.6 191 74.9
HPP92_026744 Vanilla planifolia HOM05D006329 ORTHO05D008357 3.2e-64 250.0 260 56.2
MCO14G528 Micromonas commoda HOM05D006329 ORTHO05D008357 1.4e-56 224.6 257 47.5
CBR_g29624 Chara braunii HOM05D006329 ORTHO05D008357 7.0e-51 205.7 162 61.1
AUR62014125 Chenopodium quinoa HOM05D006329 ORTHO05D008357 1.0e-49 201.8 152 68.4
Cre02.g095121 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 8.8e-46 188.7 324 36.7
PRCOL_00004574 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 6.3e-44 182.6 253 41.9
CAN.G176.13 Capsicum annuum HOM05D006329 ORTHO05D033978 8.3e-36 155.6 83 88.0
Hma1.2p1_2894F.1_g329970 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 5.0e-33 146.4 82 81.7
Pp3s196_90 Physcomitrium patens HOM05D006329 ORTHO05D008357 3.5e-26 123.6 247 30.4
AT3G43340 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 1.8e-22 111.3 73 69.9
Hma1.2p1_2894F.1_g329973 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 8.3e-20 102.4 57 80.7
CAN.G184.4 Capsicum annuum HOM05D006329 ORTHO05D028485 2.3e-17 94.4 68 67.6
Cre07.g323550 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 2.5e-16 90.9 229 28.4
Glyma.20G182966 Glycine max HOM05D006329 ORTHO05D028485 3.3e-16 90.5 88 52.3
MCO04G216 Micromonas commoda HOM05D006329 ORTHO05D008357 2.0e-13 81.3 260 27.7
Potri.010G226901 Populus trichocarpa HOM05D006329 ORTHO05D028485 1.3e-12 78.6 51 76.5
MCO01G641 Micromonas commoda HOM05D006329 ORTHO05D008357 3.2e-11 73.9 229 28.8
Lalb_Chr21g0313531 Lupinus albus HOM05D006329 ORTHO05D008357 1.1e-08 65.5 106 42.5


User provided reference genes

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