Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0008045 Sechium edule HOM05D003686 ORTHO05D004322 1.8e-93 346.3 222 100.0
ClCG09G006530 Citrullus lanatus HOM05D003686 ORTHO05D004322 3.8e-64 248.8 197 80.7
Sed0010038 Sechium edule HOM05D003686 ORTHO05D004322 5.5e-63 245.0 204 67.6
CsaV3_7G028310 Cucumis sativus L. HOM05D003686 ORTHO05D004322 1.8e-58 229.9 197 75.1
MELO3C015891.2 Cucumis melo HOM05D003686 ORTHO05D004322 5.4e-58 228.4 197 76.1
Haze_04804 Corylus avellana HOM05D003686 ORTHO05D004322 1.4e-53 213.8 203 60.1
CiPaw.07G099200 Carya illinoinensis HOM05D003686 ORTHO05D004322 6.8e-53 211.5 202 65.3
Gohir.A08G043900 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.4e-50 203.8 204 60.8
Gohir.D11G123300 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.8e-50 203.4 213 57.7
RcHm_v2.0_Chr6g0292481 Rosa chinensis HOM05D003686 ORTHO05D004322 1.6e-49 200.3 207 62.3
Cpa.g.sc9.157 Carica papaya HOM05D003686 ORTHO05D004322 4.6e-49 198.7 207 63.8
Duzib133G0241 Durio zibethinus HOM05D003686 ORTHO05D004322 1.7e-48 196.8 209 64.1
QL07p015848 Quercus lobata HOM05D003686 ORTHO05D004322 1.9e-47 193.4 208 55.3
Gorai.004G053600 Gossypium raimondii HOM05D003686 ORTHO05D004322 2.5e-47 193.0 204 57.4
CiPaw.08G100800 Carya illinoinensis HOM05D003686 ORTHO05D004322 1.2e-46 190.7 201 67.2
Duzib138G0197 Durio zibethinus HOM05D003686 ORTHO05D004322 4.7e-46 188.7 224 62.9
CANSAT78G2257 Cannabis sativa HOM05D003686 ORTHO05D004322 1.4e-45 187.2 212 53.3
COL.COLO4_08036 Corchorus olitorius HOM05D003686 ORTHO05D004322 2.3e-45 186.4 218 54.6
Glyma.10G021900 Glycine max HOM05D003686 ORTHO05D004322 2.3e-45 186.4 210 55.7
Manes.05G068800 Manihot esculenta HOM05D003686 ORTHO05D004322 4.0e-45 185.7 221 57.0
QL04p005272 Quercus lobata HOM05D003686 ORTHO05D004322 5.2e-45 185.3 208 52.9
Eucgr.A00286 Eucalyptus grandis HOM05D003686 ORTHO05D004322 6.8e-45 184.9 200 54.5
Eucgr.B02749 Eucalyptus grandis HOM05D003686 ORTHO05D004322 6.8e-45 184.9 202 62.4
Manes.01G213100 Manihot esculenta HOM05D003686 ORTHO05D004322 1.2e-44 184.1 209 53.1
Gorai.007G132200 Gossypium raimondii HOM05D003686 ORTHO05D004322 1.5e-44 183.7 209 60.3
Gohir.D08G053600 Gossypium hirsutum HOM05D003686 ORTHO05D004322 2.0e-44 183.3 201 56.2
Potri.003G058400 Populus trichocarpa HOM05D003686 ORTHO05D004322 2.0e-44 183.3 203 55.7
QL93p0358_0011 Quercus lobata HOM05D003686 ORTHO05D004322 2.6e-44 183.0 208 57.7
TPR.G15798 Trifolium pratense HOM05D003686 ORTHO05D004322 5.8e-44 181.8 222 56.3
Gohir.A11G118400 Gossypium hirsutum HOM05D003686 ORTHO05D004322 7.5e-44 181.4 209 59.3
TAR362G1277 Trochodendron aralioides HOM05D003686 ORTHO05D004322 7.5e-44 181.4 201 55.7
Thecc.10G102800 Theobroma cacao HOM05D003686 ORTHO05D004322 9.8e-44 181.0 209 71.3
Glyma.02G152300 Glycine max HOM05D003686 ORTHO05D004322 1.3e-43 180.6 208 63.9
Lj5g0005016 Lotus japonicus HOM05D003686 ORTHO05D004322 1.7e-43 180.3 212 63.7
TWI14G0352 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 2.2e-43 179.9 203 57.1
Atru.chr5.1287 Acer truncatum HOM05D003686 ORTHO05D004322 4.9e-43 178.7 207 59.9
Aqoxy2G03146 Aquilegia oxysepala HOM05D003686 ORTHO05D004322 4.9e-43 178.7 193 56.5
Lalb_Chr02g0143061 Lupinus albus HOM05D003686 ORTHO05D004322 6.4e-43 178.3 208 58.7
TWI23G0547 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 1.1e-42 177.6 194 60.3
Cfa010467 Carpinus fangiana HOM05D003686 ORTHO05D004322 1.4e-42 177.2 95 89.5
Ca_10377_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 1.4e-42 177.2 194 61.9
Ca_29655_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 1.4e-42 177.2 194 61.9
TAR365G0683 Trochodendron aralioides HOM05D003686 ORTHO05D004322 1.4e-42 177.2 198 57.1
Ciclev10022350m.g Citrus clementina HOM05D003686 ORTHO05D004322 1.9e-42 176.8 203 59.1
PGR031G1643 Punica granatum HOM05D003686 ORTHO05D004322 1.9e-42 176.8 198 53.5
TAR636G2878 Trochodendron aralioides HOM05D003686 ORTHO05D004322 3.2e-42 176.0 212 51.4
Lalb_Chr06g0163281 Lupinus albus HOM05D003686 ORTHO05D004322 5.4e-42 175.3 210 55.2
Nn1g08910 Nelumbo nucifera HOM05D003686 ORTHO05D004322 9.2e-42 174.5 188 54.3
vmacro17192 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 9.2e-42 174.5 212 50.9
FAN20G0133 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.2e-41 174.1 210 55.2
FAN27G0391 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.2e-41 174.1 210 55.2
Lj1g0025208 Lotus japonicus HOM05D003686 ORTHO05D004322 1.6e-41 173.7 206 52.9
VMungo0720G0802 Vigna mungo HOM05D003686 ORTHO05D004322 2.0e-41 173.3 209 58.9
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 1.7e-40 170.2 246 52.4
arahy.Tifrunner.gnm1.ann1.MV1AMG Arachis hypogaea HOM05D003686 ORTHO05D004322 2.3e-40 169.9 210 59.0
GSVIVG01011011001 Vitis vinifera HOM05D003686 ORTHO05D004322 3.0e-40 169.5 100 86.0
Dinv11293 Davidia involucrata HOM05D003686 ORTHO05D004322 5.0e-40 168.7 197 62.9
FAN15G3346 Fragaria x ananassa HOM05D003686 ORTHO05D004322 5.0e-40 168.7 213 54.5
DCAR_007018 Daucus carota HOM05D003686 ORTHO05D004322 8.6e-40 167.9 203 52.7
Phvul.007G166600 Phaseolus vulgaris HOM05D003686 ORTHO05D004322 8.6e-40 167.9 223 59.6
CDE11G0890 Ceratophyllum demersum HOM05D003686 ORTHO05D004322 1.1e-39 167.5 97 84.5
Rhsim13G0017700 Rhododendron simsii HOM05D003686 ORTHO05D004322 1.1e-39 167.5 227 46.7
Dinv11297 Davidia involucrata HOM05D003686 ORTHO05D004322 1.5e-39 167.2 197 62.4
FvH4_2g24650 Fragaria vesca HOM05D003686 ORTHO05D004322 1.5e-39 167.2 210 54.3
Prupe.8G251800 Prunus persica HOM05D003686 ORTHO05D004322 2.5e-39 166.4 105 81.0
Ca_09109_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 3.3e-39 166.0 183 52.5
HanXRQChr01g0002781 Helianthus annuus HOM05D003686 ORTHO05D004322 2.1e-38 163.3 223 51.1
HanXRQChr11g0330151 Helianthus annuus HOM05D003686 ORTHO05D004322 2.8e-38 162.9 208 56.2
Os02g0266100 Oryza sativa ssp. japonica HOM05D003686 ORTHO05D004322 3.6e-38 162.5 98 83.7
Psat3g024960 Pisum sativum HOM05D003686 ORTHO05D004322 3.6e-38 162.5 97 82.5
MSTRG.21821 Avicennia marina HOM05D003686 ORTHO05D004322 6.2e-38 161.8 92 80.4
MD11G1297300 Malus domestica HOM05D003686 ORTHO05D004322 1.1e-37 161.0 202 53.0
Zm00001eb203990 Zea mays HOM05D003686 ORTHO05D004322 1.1e-37 161.0 98 82.7
THA.LOC104826011 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 2.3e-37 159.8 204 57.8
Sp6g03160 Schrenkiella parvula HOM05D003686 ORTHO05D004322 3.1e-37 159.5 92 85.9
Actinidia00703 Actinidia chinensis HOM05D003686 ORTHO05D004322 5.2e-37 158.7 208 53.4
Thhalv10028986m.g Eutrema salsugineum HOM05D003686 ORTHO05D004322 5.2e-37 158.7 205 62.9
ATR0706G002 Amborella trichopoda HOM05D003686 ORTHO05D004322 8.9e-37 157.9 95 83.2
A03p30600 Brassica napus HOM05D003686 ORTHO05D004322 8.9e-37 157.9 200 64.5
C03p37160 Brassica napus HOM05D003686 ORTHO05D004322 8.9e-37 157.9 92 82.6
BolC3t16013H Brassica oleracea HOM05D003686 ORTHO05D004322 8.9e-37 157.9 92 82.6
BolC9t53184H Brassica oleracea HOM05D003686 ORTHO05D004322 8.9e-37 157.9 93 79.6
BraA03t12240Z Brassica rapa HOM05D003686 ORTHO05D004322 8.9e-37 157.9 200 64.5
Migut.N00130 Erythranthe guttata HOM05D003686 ORTHO05D004322 8.9e-37 157.9 92 79.3
Medtr7g107640 Medicago truncatula HOM05D003686 ORTHO05D004322 8.9e-37 157.9 96 80.2
BcaB01g02510 Brassica carinata HOM05D003686 ORTHO05D004322 1.2e-36 157.5 87 86.2
BcaC01g06704 Brassica carinata HOM05D003686 ORTHO05D004322 1.2e-36 157.5 87 86.2
Medtr1g088990 Medicago truncatula HOM05D003686 ORTHO05D004322 1.2e-36 157.5 207 58.5
BcaB01g01979 Brassica carinata HOM05D003686 ORTHO05D004322 1.5e-36 157.1 87 83.9
Sabra03G0032800 Salix brachista HOM05D003686 ORTHO05D004322 2.0e-36 156.8 187 54.0
A09p02440 Brassica napus HOM05D003686 ORTHO05D004322 2.6e-36 156.4 92 80.4
BraA09t35891Z Brassica rapa HOM05D003686 ORTHO05D004322 2.6e-36 156.4 92 80.4
BcaB05g23688 Brassica carinata HOM05D003686 ORTHO05D004322 3.4e-36 156.0 92 84.8
BcaB05g23689 Brassica carinata HOM05D003686 ORTHO05D004322 3.4e-36 156.0 92 84.8
Hma1.2p1_0643F.1_g194695 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 9.8e-36 154.5 89 80.9
Hma1.2p1_0643F.1_g194700 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 9.8e-36 154.5 89 80.9
Hma1.2p1_0643F.1_g194710 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 9.8e-36 154.5 89 80.9
Hma1.2p1_0643F.1_g194711 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 9.8e-36 154.5 89 80.9
PGSC0003DMG400022854 Solanum tuberosum HOM05D003686 ORTHO05D004322 1.3e-35 154.1 98 75.5
THA.LOC104817532 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 1.3e-35 154.1 92 79.3
Nitab4.5_0000295g0050 Nicotiana tabacum HOM05D003686 ORTHO05D004322 1.7e-35 153.7 199 53.8
arahy.Tifrunner.gnm1.ann1.TAZ1K7 Arachis hypogaea HOM05D003686 ORTHO05D004322 2.2e-35 153.3 240 56.2
Lsat_1_v5_gn_5_188760 Lactuca sativa HOM05D003686 ORTHO05D004322 2.9e-35 152.9 213 48.8
Nitab4.5_0004238g0080 Nicotiana tabacum HOM05D003686 ORTHO05D004322 6.4e-35 151.8 199 53.3
Sopen06g003610 Solanum pennellii HOM05D003686 ORTHO05D004322 8.3e-35 151.4 205 52.2
MD03G1275200 Malus domestica HOM05D003686 ORTHO05D004322 1.1e-34 151.0 179 51.4
CAN.G185.6 Capsicum annuum HOM05D003686 ORTHO05D004322 1.4e-34 150.6 92 76.1
Peaxi162Scf01364g00015 Petunia axillaris HOM05D003686 ORTHO05D004322 1.4e-34 150.6 98 72.4
Solyc06g008860.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 1.4e-34 150.6 205 51.7
CARHR251560 Cardamine hirsuta HOM05D003686 ORTHO05D004322 2.4e-34 149.8 106 70.8
AT4G03120 Arabidopsis thaliana HOM05D003686 ORTHO05D004322 3.2e-34 149.4 103 72.8
ECA248G2178 Erigeron canadensis HOM05D003686 ORTHO05D004322 3.2e-34 149.4 139 60.4
Solyc01g067830.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 3.2e-34 149.4 201 45.3
Sopen01g029780 Solanum pennellii HOM05D003686 ORTHO05D004322 3.2e-34 149.4 98 73.5
DCAR_012430 Daucus carota HOM05D003686 ORTHO05D004322 4.1e-34 149.1 223 45.3
PGSC0003DMG400021997 Solanum tuberosum HOM05D003686 ORTHO05D004322 1.2e-33 147.5 205 52.2
Carub.0006s3393 Capsella rubella HOM05D003686 ORTHO05D004322 3.5e-33 146.0 86 81.4
BolC2t10013H Brassica oleracea HOM05D003686 ORTHO05D004322 1.7e-32 143.7 92 79.3
Nn2g12370 Nelumbo nucifera HOM05D003686 ORTHO05D004322 3.9e-32 142.5 195 47.2
PSO339G4974 Papaver somniferum HOM05D003686 ORTHO05D004322 5.1e-32 142.1 91 75.8
Cc01_g20160 Coffea canephora HOM05D003686 ORTHO05D004322 6.6e-32 141.7 218 43.1
ECA247G2101 Erigeron canadensis HOM05D003686 ORTHO05D004322 6.6e-32 141.7 281 38.4
FAN24G2968 Fragaria x ananassa HOM05D003686 ORTHO05D004322 6.6e-32 141.7 189 48.7
Mapoly0103s0046 Marchantia polymorpha HOM05D003686 ORTHO05D004322 6.6e-32 141.7 97 73.2
BcaC03g16209 Brassica carinata HOM05D003686 ORTHO05D004322 8.6e-32 141.4 91 79.1
Ah.12g061550 Amaranthus hybridus HOM05D003686 ORTHO05D004322 5.6e-31 138.7 141 66.7
Sc25g0004660 Simmondsia chinensis HOM05D003686 ORTHO05D004322 5.6e-31 138.7 93 76.3
FAN20G1534 Fragaria x ananassa HOM05D003686 ORTHO05D004322 7.3e-31 138.3 195 51.8
PSO801G0146 Papaver somniferum HOM05D003686 ORTHO05D004322 9.5e-31 137.9 204 49.0
AUR62025901 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.2e-30 137.5 94 76.6
AUR62025902 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.2e-30 137.5 94 76.6
BraA02t07500Z Brassica rapa HOM05D003686 ORTHO05D004322 3.6e-30 136.0 92 76.1
COL.COLO4_34092 Corchorus olitorius HOM05D003686 ORTHO05D004322 4.7e-30 135.6 95 75.8
AUR62029649 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.4e-29 134.0 94 75.5
SalBow6G6913 Salvia bowleyana HOM05D003686 ORTHO05D004322 8.9e-29 131.3 167 57.5
MSTRG.12592 Avicennia marina HOM05D003686 ORTHO05D004322 3.4e-28 129.4 93 73.1
Mapoly0087s0074 Marchantia polymorpha HOM05D003686 ORTHO05D004322 3.4e-28 129.4 120 60.8
SalBow8G5349 Salvia bowleyana HOM05D003686 ORTHO05D004322 3.4e-28 129.4 136 63.2
EL10Ac2g03326 Beta vulgaris HOM05D003686 ORTHO05D004322 4.4e-28 129.0 78 82.1
Psat6g168000 Pisum sativum HOM05D003686 ORTHO05D004322 4.4e-28 129.0 183 50.8
A02p25120 Brassica napus HOM05D003686 ORTHO05D004322 5.8e-28 128.6 102 68.6
CAN.G1006.23 Capsicum annuum HOM05D003686 ORTHO05D004322 5.8e-28 128.6 148 56.8
AagrBONN_evm.TU.Sc2ySwM_228.930 Anthoceros agrestis HOM05D003686 ORTHO05D004322 9.9e-28 127.9 78 78.2
Nitab4.5_0001149g0030 Nicotiana tabacum HOM05D003686 ORTHO05D004322 9.9e-28 127.9 88 70.5
Nitab4.5_0001624g0040 Nicotiana tabacum HOM05D003686 ORTHO05D004322 9.9e-28 127.9 88 70.5
Pp3c4_170 Physcomitrium patens HOM05D003686 ORTHO05D004322 9.9e-28 127.9 116 62.9
HPP92_021461 Vanilla planifolia HOM05D003686 ORTHO05D004322 3.8e-27 125.9 80 80.0
Oeu022800.1 Olea europaea HOM05D003686 ORTHO05D004322 4.9e-27 125.6 92 69.6
Oeu022802.1 Olea europaea HOM05D003686 ORTHO05D004322 4.9e-27 125.6 92 69.6
CSS0048633 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 1.1e-26 124.4 103 63.1
Pp3c12_26180 Physcomitrium patens HOM05D003686 ORTHO05D004322 1.1e-26 124.4 98 69.4
Migut.N02118 Erythranthe guttata HOM05D003686 ORTHO05D004322 2.4e-26 123.2 109 63.3
Migut.O00643 Erythranthe guttata HOM05D003686 ORTHO05D004322 2.4e-26 123.2 109 63.3
C09p02540 Brassica napus HOM05D003686 ORTHO05D004322 9.2e-26 121.3 72 80.6
Lj2P1184T34 Lonicera japonica HOM05D003686 ORTHO05D004322 1.6e-25 120.6 222 41.4
Lj3A810T51 Lonicera japonica HOM05D003686 ORTHO05D004322 2.1e-25 120.2 85 72.9
vmacro02511 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 4.6e-25 119.0 79 75.9
HPP92_021468 Vanilla planifolia HOM05D003686 ORTHO05D004322 7.8e-25 118.2 75 80.0
CSS0007511 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 1.3e-24 117.5 75 76.0
CSS0037271 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 1.3e-24 117.5 75 76.0
SGA_v2.0_scaffold89G27564 Striga asiatica HOM05D003686 ORTHO05D004322 3.9e-24 115.9 116 56.9
unitig_61.g26148 Utricularia gibba HOM05D003686 ORTHO05D004322 6.6e-24 115.2 135 51.1
SGA_v2.0_scaffold36G14363 Striga asiatica HOM05D003686 ORTHO05D004322 1.1e-23 114.4 168 45.8
Psat3g182400 Pisum sativum HOM05D003686 ORTHO05D004322 1.5e-23 114.0 72 77.8
Psat0s3642g0040 Pisum sativum HOM05D000068 ORTHO05D025728 1.2e-22 110.9 60 88.3
SGA_v2.0_scaffold172G39059 Striga asiatica HOM05D003686 ORTHO05D004322 1.6e-22 110.5 104 58.7
Duzib211G0369 Durio zibethinus HOM05D003686 ORTHO05D004322 6.9e-21 105.1 67 79.1
Peaxi162Scf00936g00218 Petunia axillaris HOM05D003686 ORTHO05D004322 4.4e-20 102.4 168 40.5
unitig_22.g6331 Utricularia gibba HOM05D003686 ORTHO05D004322 4.4e-20 102.4 93 57.0
Hund24902 Selenicereus undatus HOM05D003686 ORTHO05D004322 4.9e-19 99.0 118 53.4
Peaxi162Scf01067g00002 Petunia axillaris HOM05D003686 ORTHO05D004322 3.5e-17 92.8 64 68.8
vmacro14957 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.8e-13 80.5 185 45.4
Cre09.g401300 Chlamydomonas reinhardtii HOM05D003686 ORTHO05D004322 1.2e-12 77.8 39 82.1
vmacro14959 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.2e-12 77.8 219 36.1
Lj5g0025755 Lotus japonicus HOM05D003686 ORTHO05D009933 2.9e-11 73.2 63 65.1
QL07p015856 Quercus lobata HOM05D003686 ORTHO05D004322 2.4e-10 70.1 197 32.0
QL93p0358_0018 Quercus lobata HOM05D003686 ORTHO05D004322 1.2e-09 67.8 197 31.5
PSO384G1563 Papaver somniferum HOM05D003686 ORTHO05D004322 5.1e-08 62.4 77 53.2
PSO384G1591 Papaver somniferum HOM05D000185 ORTHO05D000105 5.1e-08 62.4 77 53.2
PSO384G1636 Papaver somniferum HOM05D000185 ORTHO05D000105 5.1e-08 62.4 77 53.2
PSO384G1681 Papaver somniferum HOM05D003686 ORTHO05D004322 5.1e-08 62.4 77 53.2
PRCOL_00005459 Prasinoderma coloniale HOM05D003686 ORTHO05D004322 9.6e-07 58.2 39 64.1


User provided reference genes

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