Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 2.8e-194 681.8 356 100.0
CsaV3_6G010080 Cucumis sativus L. HOM05D005431 ORTHO05D006762 3.0e-135 485.7 338 78.4
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 4.1e-124 448.7 335 71.0
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 2.0e-123 446.4 349 70.2
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 5.0e-122 441.8 330 70.6
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 5.5e-121 438.3 327 70.3
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 4.6e-120 435.3 344 69.2
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 1.3e-119 433.7 342 67.8
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 3.9e-119 432.2 330 69.4
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 5.1e-119 431.8 356 66.3
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 1.1e-118 430.6 351 68.4
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 2.5e-118 429.5 343 67.9
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 2.2e-117 426.4 340 67.1
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 3.7e-117 425.6 330 69.7
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 6.3e-117 424.9 338 68.6
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 6.3e-117 424.9 327 69.1
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 4.1e-116 422.2 328 69.5
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 4.1e-116 422.2 341 67.4
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 2.0e-115 419.9 348 66.7
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 2.6e-115 419.5 330 70.0
ClCG02G009850 Citrullus lanatus HOM05D005431 ORTHO05D006762 2.6e-115 419.5 295 77.3
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 2.6e-115 419.5 357 66.9
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 3.4e-115 419.1 330 69.4
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 5.9e-115 418.3 333 66.7
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 7.7e-115 417.9 328 71.3
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 1.0e-114 417.5 328 71.3
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.3e-114 417.2 333 67.3
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 2.2e-114 416.4 341 67.7
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 2.9e-114 416.0 355 63.7
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 3.8e-114 415.6 330 67.9
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 2.5e-113 412.9 360 63.3
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 3.2e-113 412.5 327 69.1
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 5.5e-113 411.8 354 65.0
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 2.7e-112 409.5 353 66.6
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 2.7e-112 409.5 355 65.6
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 4.6e-112 408.7 329 67.2
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 7.9e-112 407.9 335 65.7
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 7.9e-112 407.9 334 66.2
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 1.0e-111 407.5 337 65.9
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 1.4e-111 407.1 352 64.8
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 3.0e-111 406.0 334 65.3
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 7.4e-110 401.4 338 66.0
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 3.7e-109 399.1 354 64.4
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 3.7e-109 399.1 338 64.8
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 3.1e-108 396.0 330 65.2
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 5.3e-108 395.2 344 66.3
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 2.0e-107 393.3 350 65.1
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 2.0e-107 393.3 330 65.8
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 2.0e-107 393.3 356 62.9
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 2.6e-107 392.9 362 61.9
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 5.9e-107 391.7 352 61.1
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 1.0e-106 391.0 353 63.5
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 1.7e-106 390.2 350 64.3
Cfa016425 Carpinus fangiana HOM05D005431 ORTHO05D006762 3.8e-106 389.0 332 67.2
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 3.8e-106 389.0 330 65.2
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 1.1e-105 387.5 330 62.7
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 1.4e-105 387.1 342 63.2
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 2.5e-105 386.3 356 62.4
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 1.2e-104 384.0 345 62.9
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 2.1e-104 383.3 352 63.6
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 2.7e-104 382.9 329 65.3
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 4.7e-104 382.1 327 65.4
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 7.9e-104 381.3 330 63.9
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 1.8e-103 380.2 330 62.1
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 3.0e-103 379.4 330 60.9
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 3.0e-103 379.4 331 63.1
Haze_19398 Corylus avellana HOM05D005431 ORTHO05D006762 1.1e-102 377.5 348 62.4
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 2.0e-102 376.7 327 62.4
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 4.4e-102 375.6 328 61.0
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 5.7e-102 375.2 328 64.3
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 1.3e-101 374.0 356 61.5
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 8.2e-101 371.3 351 59.8
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 8.2e-101 371.3 329 61.4
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 1.1e-100 370.9 328 60.4
VMungo1383G2520 Vigna mungo HOM05D005431 ORTHO05D006762 1.6e-99 367.1 309 64.7
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 3.5e-99 365.9 358 59.5
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 4.5e-99 365.5 357 58.0
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 5.9e-99 365.2 328 60.7
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 5.9e-99 365.2 328 60.7
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 3.2e-97 359.4 375 58.1
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 4.7e-96 355.5 355 54.4
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 4.0e-95 352.4 347 60.8
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 8.8e-95 351.3 372 55.4
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 1.3e-93 347.4 336 56.8
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 1.1e-92 344.4 335 61.5
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 1.1e-92 344.4 332 58.7
Nitab4.5_0001364g0090 Nicotiana tabacum HOM05D005431 ORTHO05D006762 5.3e-92 342.0 323 61.0
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 9.1e-92 341.3 358 55.9
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 3.5e-91 339.3 331 56.2
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 8.0e-88 328.2 350 56.3
Cfa011866 Carpinus fangiana HOM05D005431 ORTHO05D006762 1.8e-87 327.0 288 64.2
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 4.0e-87 325.9 330 59.1
Pp3c5_17010 Physcomitrium patens HOM05D005431 ORTHO05D006762 2.8e-85 319.7 336 54.8
Haze_21236 Corylus avellana HOM05D005431 ORTHO05D006762 3.7e-85 319.3 288 64.2
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 3.7e-85 319.3 267 67.0
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 1.8e-84 317.0 345 53.3
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 4.1e-84 315.8 340 54.1
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 2.1e-80 303.5 337 50.1
SMO339G0047 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 4.4e-78 295.8 322 52.5
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 9.2e-76 288.1 282 58.2
Cpa.g.sc594.2 Carica papaya HOM05D005431 ORTHO05D006762 3.3e-65 253.1 243 64.2
Mapoly0054s0019 Marchantia polymorpha HOM05D005431 ORTHO05D006762 7.0e-60 235.3 288 49.7
Potri.019G031700 Populus trichocarpa HOM05D005431 ORTHO05D006762 4.3e-57 226.1 229 59.4
MELO3C013491.2 Cucumis melo HOM05D005431 ORTHO05D006762 1.6e-56 224.2 182 74.2
CBR_g41665 Chara braunii HOM05D005431 ORTHO05D006762 6.4e-53 212.2 333 46.5
Hund08532 Selenicereus undatus HOM05D005431 ORTHO05D006762 3.0e-50 203.4 218 56.4
AagrBONN_evm.TU.Sc2ySwM_117.3064__3065 Anthoceros agrestis HOM05D005431 ORTHO05D006762 3.2e-44 183.3 256 47.7
Rhsim03G0115400 Rhododendron simsii HOM05D005431 ORTHO05D006762 3.0e-42 176.8 285 45.3
Cpa.g.sc3384.1 Carica papaya HOM05D005431 ORTHO05D006762 5.2e-39 166.0 99 81.8
Hund08530 Selenicereus undatus HOM05D005431 ORTHO05D006762 1.3e-37 161.4 96 79.2
Phvul.004G137800 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 1.2e-35 154.8 93 77.4
TPR.G5899 Trifolium pratense HOM05D000002 ORTHO05D000001 7.3e-33 145.6 109 75.2
Aqoxy113s003 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.8e-31 141.0 309 37.2
MBI05_g45098_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 1.2e-27 128.3 184 50.5
TPR.G552 Trifolium pratense HOM05D005431 ORTHO05D006762 1.0e-26 125.2 115 59.1
MBI05_g33993_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 1.5e-22 111.3 100 58.0
Pp3c25_8310 Physcomitrium patens HOM05D005431 ORTHO05D006762 1.7e-21 107.8 142 44.4
BcaB03g13279 Brassica carinata HOM05D005431 ORTHO05D006762 8.4e-21 105.5 60 76.7
Lsat_1_v5_gn_3_133701 Lactuca sativa HOM05D005431 ORTHO05D006762 1.1e-17 95.1 176 43.2
AagrBONN_evm.TU.Sc2ySwM_228.2880 Anthoceros agrestis HOM05D005431 ORTHO05D006762 7.4e-17 92.4 117 43.6
SHI14717 Sapria himalayana HOM05D005431 ORTHO05D006762 8.1e-16 89.0 128 46.1
Aqoxy6G02072 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.4e-15 88.2 97 54.6
TPR.G5921 Trifolium pratense HOM05D005431 ORTHO05D006762 1.4e-15 88.2 54 75.9
SHI14712 Sapria himalayana HOM05D000001 ORTHO05D009229 1.5e-14 84.7 44 86.4
C08p12570 Brassica napus HOM05D005431 ORTHO05D006762 2.0e-14 84.3 49 81.6
BolC8t48895H Brassica oleracea HOM05D005431 ORTHO05D006762 2.0e-14 84.3 49 81.6
SMO116G0263 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 1.0e-13 82.0 83 48.2
ClCG02G009830 Citrullus lanatus HOM05D005431 ORTHO05D006762 1.3e-13 81.6 50 86.0
CAN.G134.235 Capsicum annuum HOM05D005431 ORTHO05D006762 3.5e-11 73.6 56 60.7
SHI14714 Sapria himalayana HOM05D005431 ORTHO05D006762 1.8e-10 71.2 49 69.4
SGA_v2.0_scaffold612G53193 Striga asiatica HOM05D005431 ORTHO05D006762 6.7e-10 69.3 50 62.0
SHI14719 Sapria himalayana HOM05D005431 ORTHO05D006762 3.7e-08 63.5 33 87.9
SEGI_17961 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 3.7e-08 63.5 120 36.7
Lsat_1_v5_gn_6_94960 Lactuca sativa HOM05D005431 ORTHO05D003355 3.1e-07 60.5 48 64.6
SEGI_34663 Sequoiadendron giganteum HOM05D002411 ORTHO05D002564 1.0e-05 55.5 93 36.6


User provided reference genes

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