Gene: TPR.G552
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G552
- Transcript Identifier TPR.T553
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_scaf_35954 : 39-498 : positive
Gene Family Information
- ID HOM05D005431
- #Genes/#Species 140/94
- Phylogenetic origin
- ID ORTHO05D006762
- #Genes/#Species 138/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA553.v2
- id Tp57577_TGAC_v2_gene552.v2
- pacid 35976873
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010229 | ISO | PLAZA Integrative Orthology | inflorescence development | AT1G09230 |
| GO:0000398 | ISO | PLAZA Integrative Orthology | mRNA splicing, via spliceosome | AT1G09230 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05D005431 |
| GO:0030626 | ISO | PLAZA Integrative Orthology | U12 snRNA binding | AT1G09230 |
| GO:0097157 | ISO | PLAZA Integrative Orthology | pre-mRNA intronic binding | AT1G09230 |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D005431 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G09230 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 16.2.4.2.4 | RNA processing.pre-mRNA splicing.U12-type-intron-specific minor spliceosome.U11/U12 small nuclear ribonucleoprotein particle (snRNP).protein factor (U11/U12-65K) |