Gene: AUR62027554

General Information

Structural Information

Species Chenopodium quinoa
Gene Identifier AUR62027554
Transcript Identifier AUR62027554-RA
Gene Type Coding gene
Location C_Quinoa_Scaffold_1125 : 2135509-2142993 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D005431
#Genes/#Species 140/94
Phylogenetic origin

ID ORTHO05D006762
#Genes/#Species 138/94
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id AUR62027554.v1.0
pacid 36284955
uniprot A0A803MDL1

Descriptions

Short descriptions
Ortholog descriptions

Description SNRNP65: U11/U12 small nuclear ribonucleoprotein 65 kDa protein

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0010229	ISO	PLAZA Integrative Orthology	inflorescence development	AT1G09230
GO:0000398	ISO	PLAZA Integrative Orthology	mRNA splicing, via spliceosome	AT1G09230

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	GOA Database	nucleic acid binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0030626	ISO	PLAZA Integrative Orthology	U12 snRNA binding	AT1G09230
GO:0097157	ISO	PLAZA Integrative Orthology	pre-mRNA intronic binding	AT1G09230
GO:0005515	ISO	PLAZA Homology (enrichment)	protein binding	HOM05D005431

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT1G09230

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000504	RNA recognition motif domain
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR035979	RNA-binding domain superfamily

Mapman id	Description
16.2.4.2.4	RNA processing.pre-mRNA splicing.U12-type-intron-specific minor spliceosome.U11/U12 small nuclear ribonucleoprotein particle (snRNP).protein factor (U11/U12-65K)