Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO205G0003 Selaginella moellendorffii HOM05D005687 ORTHO05D007098 1.3e-41 172.6 82 100.0
SMO155G0007 Selaginella moellendorffii HOM05D005687 ORTHO05D007098 1.6e-39 165.6 82 96.3
SMO001G0002 Selaginella moellendorffii HOM05D005687 ORTHO05D007098 6.0e-39 163.7 82 95.1
SMO001G0007 Selaginella moellendorffii HOM05D005687 ORTHO05D007098 6.0e-39 163.7 82 95.1
SMO270G0057 Selaginella moellendorffii HOM05D005687 ORTHO05D007098 6.0e-39 163.7 82 95.1
SMO306G0020 Selaginella moellendorffii HOM05D005687 ORTHO05D007098 6.6e-38 160.2 82 93.9
SMO270G0027 Selaginella moellendorffii HOM05D005687 ORTHO05D007098 1.4e-35 152.5 82 90.2
SMO116G0266 Selaginella moellendorffii HOM05D005687 ORTHO05D007098 2.2e-33 145.2 82 82.9
Mapoly0002s0019 Marchantia polymorpha HOM05D005687 ORTHO05D007098 9.3e-32 139.8 82 80.5
Pp3c6_10380 Physcomitrium patens HOM05D005687 ORTHO05D007098 1.7e-30 135.6 82 75.6
Hma1.2p1_0004F.1_g003990 Hydrangea macrophylla HOM05D005687 ORTHO05D007098 1.1e-29 132.9 82 75.6
Dinv41744 Davidia involucrata HOM05D005687 ORTHO05D007098 2.5e-29 131.7 82 74.4
CANSAT35G0683 Cannabis sativa HOM05D005687 ORTHO05D007098 7.3e-29 130.2 82 74.4
CDE06G1536 Ceratophyllum demersum HOM05D005687 ORTHO05D007098 7.3e-29 130.2 82 74.4
Ciclev10000582m.g Citrus clementina HOM05D005687 ORTHO05D007098 7.3e-29 130.2 82 74.4
DCAR_017367 Daucus carota HOM05D005687 ORTHO05D007098 1.6e-28 129.0 82 73.2
Os04g0434300 Oryza sativa ssp. japonica HOM05D005687 ORTHO05D007098 1.6e-28 129.0 80 72.5
PSO170G1542 Papaver somniferum HOM05D005687 ORTHO05D007098 1.6e-28 129.0 82 73.2
HPP92_016134 Vanilla planifolia HOM05D005687 ORTHO05D007098 1.6e-28 129.0 82 72.0
PSO017G1535 Papaver somniferum HOM05D005687 ORTHO05D007098 2.1e-28 128.6 82 73.2
Sc01g0001920 Simmondsia chinensis HOM05D005687 ORTHO05D007098 2.8e-28 128.3 82 74.4
Zm00001eb422680 Zea mays HOM05D005687 ORTHO05D007098 2.8e-28 128.3 80 73.8
Nn5g27549 Nelumbo nucifera HOM05D005687 ORTHO05D007098 3.6e-28 127.9 82 74.4
TAR376G0067 Trochodendron aralioides HOM05D005687 ORTHO05D007098 3.6e-28 127.9 82 73.2
VMungo1127G0635 Vigna mungo HOM05D005687 ORTHO05D007098 3.6e-28 127.9 82 70.7
Lj7A623G45 Lonicera japonica HOM05D005687 ORTHO05D007098 6.2e-28 127.1 82 72.0
unitig_32.g11184 Utricularia gibba HOM05D001035 ORTHO05D007098 6.2e-28 127.1 82 72.0
GSVIVG01034468001 Vitis vinifera HOM05D005687 ORTHO05D007098 8.1e-28 126.7 82 72.0
MSTRG.1558 Avicennia marina HOM05D005687 ORTHO05D007098 1.1e-27 126.3 82 72.0
CiPaw.08G002200 Carya illinoinensis HOM05D005687 ORTHO05D007098 1.1e-27 126.3 82 72.0
Ca_19701_v3 Cicer arietinum L. HOM05D005687 ORTHO05D007098 1.1e-27 126.3 82 70.7
Psat7g144520 Pisum sativum HOM05D005687 ORTHO05D007098 1.1e-27 126.3 82 70.7
RcHm_v2.0_Chr7g0228031 Rosa chinensis HOM05D005687 ORTHO05D007098 1.1e-27 126.3 82 72.0
Cfa012938 Carpinus fangiana HOM05D005687 ORTHO05D007098 1.4e-27 125.9 82 72.0
COL.COLO4_15121 Corchorus olitorius HOM05D005687 ORTHO05D007098 1.4e-27 125.9 82 72.0
Glyma.12G001400 Glycine max HOM05D005687 ORTHO05D007098 1.4e-27 125.9 82 72.0
Thecc.08G189500 Theobroma cacao HOM05D005687 ORTHO05D007098 1.4e-27 125.9 82 72.0
ATR1134G072 Amborella trichopoda HOM05D005687 ORTHO05D007098 1.8e-27 125.6 82 72.0
Aqoxy5G02668 Aquilegia oxysepala HOM05D005687 ORTHO05D007098 1.8e-27 125.6 82 72.0
Lalb_Chr19g0140501 Lupinus albus HOM05D005687 ORTHO05D007098 1.8e-27 125.6 82 69.5
SGA_v2.0_scaffold118G32517 Striga asiatica HOM05D005687 ORTHO05D007098 1.8e-27 125.6 82 72.0
TWI59G0019 Tripterygium wilfordii HOM05D005687 ORTHO05D007098 1.8e-27 125.6 82 70.7
arahy.Tifrunner.gnm1.ann1.H6WZRG Arachis hypogaea HOM05D005687 ORTHO05D007098 2.4e-27 125.2 82 69.5
MELO3C022220.2 Cucumis melo HOM05D005687 ORTHO05D007098 2.4e-27 125.2 82 72.0
CsaV3_5G040460 Cucumis sativus L. HOM05D005687 ORTHO05D007098 2.4e-27 125.2 82 72.0
FAN04G0407 Fragaria x ananassa HOM05D005687 ORTHO05D007098 2.4e-27 125.2 82 70.7
FAN08G1133 Fragaria x ananassa HOM05D005687 ORTHO05D007098 2.4e-27 125.2 82 70.7
Prupe.1G553700 Prunus persica HOM05D005687 ORTHO05D007098 2.4e-27 125.2 82 70.7
Sed0023668 Sechium edule HOM05D005687 ORTHO05D007098 2.4e-27 125.2 82 69.5
Hund16781 Selenicereus undatus HOM05D005687 ORTHO05D007098 2.4e-27 125.2 82 72.0
Medtr4g033210 Medicago truncatula HOM05D005687 ORTHO05D007098 3.1e-27 124.8 82 70.7
QL02p026060 Quercus lobata HOM05D005687 ORTHO05D007098 3.1e-27 124.8 82 70.7
TPR.G34137 Trifolium pratense HOM05D005687 ORTHO05D007098 3.1e-27 124.8 82 70.7
ClCG08G000280 Citrullus lanatus HOM05D005687 ORTHO05D007098 4.0e-27 124.4 82 70.7
Manes.18G104200 Manihot esculenta HOM05D005687 ORTHO05D007098 4.0e-27 124.4 82 72.0
PGR042G3796 Punica granatum HOM05D005687 ORTHO05D007098 5.3e-27 124.0 82 70.7
Duzib177G0394 Durio zibethinus HOM05D005687 ORTHO05D007098 6.9e-27 123.6 82 68.3
Gohir.A05G273000 Gossypium hirsutum HOM05D005687 ORTHO05D007098 6.9e-27 123.6 82 70.7
Gohir.D05G275400 Gossypium hirsutum HOM05D005687 ORTHO05D007098 6.9e-27 123.6 82 70.7
Gorai.009G288500 Gossypium raimondii HOM05D005687 ORTHO05D007098 6.9e-27 123.6 82 70.7
EL10Ac1g00122 Beta vulgaris HOM05D005687 ORTHO05D007098 9.0e-27 123.2 82 70.7
Haze_21291 Corylus avellana HOM05D005687 ORTHO05D007098 9.0e-27 123.2 82 70.7
FAN18G2804 Fragaria x ananassa HOM05D005687 ORTHO05D007098 9.0e-27 123.2 82 69.5
MD08G1219300 Malus domestica HOM05D005687 ORTHO05D007098 9.0e-27 123.2 82 70.7
MD15G1407900 Malus domestica HOM05D005687 ORTHO05D007098 9.0e-27 123.2 82 70.7
Atru.chr13.2348 Acer truncatum HOM05D005687 ORTHO05D007098 1.2e-26 122.9 82 70.7
Carub.0002s1887 Capsella rubella HOM05D005687 ORTHO05D007098 1.2e-26 122.9 82 69.5
Migut.C01307 Erythranthe guttata HOM05D005687 ORTHO05D007098 1.2e-26 122.9 82 69.5
FvH4_5g32030 Fragaria vesca HOM05D005687 ORTHO05D007098 1.2e-26 122.9 82 69.5
Lsat_1_v5_gn_1_12201 Lactuca sativa HOM05D005687 ORTHO05D007098 1.2e-26 122.9 82 72.0
Lj3g0026050 Lotus japonicus HOM05D005687 ORTHO05D007098 1.2e-26 122.9 82 69.5
Phvul.011G001500 Phaseolus vulgaris HOM05D005687 ORTHO05D007098 1.2e-26 122.9 82 69.5
Actinidia01555 Actinidia chinensis HOM05D005687 ORTHO05D007098 1.5e-26 122.5 82 70.7
AT1G72090 Arabidopsis thaliana HOM05D005687 ORTHO05D007098 1.5e-26 122.5 82 69.5
CSS0035020 Camellia sinensis var. sinensis HOM05D005687 ORTHO05D007098 1.5e-26 122.5 82 70.7
CARHR064900 Cardamine hirsuta HOM05D005687 ORTHO05D007098 1.5e-26 122.5 82 69.5
Cpa.g.sc66.10 Carica papaya HOM05D005687 ORTHO05D007098 1.5e-26 122.5 82 69.5
AUR62004616 Chenopodium quinoa HOM05D005687 ORTHO05D007098 1.5e-26 122.5 82 69.5
AUR62022645 Chenopodium quinoa HOM05D005687 ORTHO05D007098 1.5e-26 122.5 82 69.5
AagrBONN_evm.TU.Sc2ySwM_344.3251 Anthoceros agrestis HOM05D005687 ORTHO05D007098 2.0e-26 122.1 82 69.5
arahy.Tifrunner.gnm1.ann1.BDG91C Arachis hypogaea HOM05D005687 ORTHO05D007098 2.0e-26 122.1 82 68.3
Cc10_g10120 Coffea canephora HOM05D005687 ORTHO05D007098 2.0e-26 122.1 82 72.0
HanXRQChr02g0044211 Helianthus annuus HOM05D005687 ORTHO05D007098 2.0e-26 122.1 82 72.0
SalBow6G3036 Salvia bowleyana HOM05D005687 ORTHO05D007098 2.6e-26 121.7 82 69.5
Eucgr.F03000 Eucalyptus grandis HOM05D005687 ORTHO05D007098 3.4e-26 121.3 82 68.3
THA.LOC104800128 Tarenaya hassleriana HOM05D005687 ORTHO05D007098 4.5e-26 120.9 82 69.5
Aa31LG4G8560 Aethionema arabicum HOM05D005687 ORTHO05D007098 5.8e-26 120.6 82 68.3
Nitab4.5_0003826g0010 Nicotiana tabacum HOM05D005687 ORTHO05D007098 5.8e-26 120.6 82 68.3
vmacro00992 Vaccinium macrocarpon HOM05D005687 ORTHO05D007098 5.8e-26 120.6 82 70.7
AL2G31710 Arabidopsis lyrata HOM05D005687 ORTHO05D007098 9.9e-26 119.8 82 68.3
Nitab4.5_0001534g0050 Nicotiana tabacum HOM05D005687 ORTHO05D007098 9.9e-26 119.8 82 68.3
Peaxi162Scf00391g00732 Petunia axillaris HOM05D005687 ORTHO05D007098 9.9e-26 119.8 82 68.3
Solyc11g022390.2 Solanum lycopersicum HOM05D005687 ORTHO05D007098 9.9e-26 119.8 82 68.3
Sopen11g011260 Solanum pennellii HOM05D005687 ORTHO05D007098 9.9e-26 119.8 82 68.3
CSS0048983 Camellia sinensis var. sinensis HOM05D005687 ORTHO05D007098 1.3e-25 119.4 82 69.5
Potri.013G107800 Populus trichocarpa HOM05D005687 ORTHO05D007098 1.3e-25 119.4 82 68.3
Sabra13G0093200 Salix brachista HOM05D005687 ORTHO05D007098 1.7e-25 119.0 82 69.5
CAN.G155.2 Capsicum annuum HOM05D005687 ORTHO05D007098 2.9e-25 118.2 82 67.1
Thhalv10018307m.g Eutrema salsugineum HOM05D005687 ORTHO05D007098 4.9e-25 117.5 82 67.1
ECA247G1762 Erigeron canadensis HOM05D005687 ORTHO05D007098 1.4e-24 115.9 82 68.3
BcaB03g14944 Brassica carinata HOM05D005687 ORTHO05D007098 3.2e-24 114.8 82 65.9
BcaC08g46660 Brassica carinata HOM05D005687 ORTHO05D007098 3.2e-24 114.8 82 65.9
A07p38240 Brassica napus HOM05D005687 ORTHO05D007098 3.2e-24 114.8 82 65.9
C06p46310 Brassica napus HOM05D005687 ORTHO05D007098 3.2e-24 114.8 82 65.9
BolC6t39676H Brassica oleracea HOM05D005687 ORTHO05D007098 3.2e-24 114.8 82 65.9
BraA07t31389Z Brassica rapa HOM05D005687 ORTHO05D007098 3.2e-24 114.8 82 65.9
Sp5g27150 Schrenkiella parvula HOM05D005687 ORTHO05D007098 3.2e-24 114.8 82 65.9
MCO07G120 Micromonas commoda HOM05D005687 ORTHO05D007098 4.6e-23 110.9 78 66.7
SMO306G0018 Selaginella moellendorffii HOM05D005687 ORTHO05D007098 1.8e-22 109.0 51 96.1
SGA_v2.0_scaffold118G32527 Striga asiatica HOM05D005687 ORTHO05D007098 3.0e-22 108.2 83 63.9
SMO270G0133 Selaginella moellendorffii HOM05D005687 ORTHO05D007098 1.5e-21 105.9 50 94.0
PRCOL_00002733 Prasinoderma coloniale HOM05D005687 ORTHO05D007098 2.8e-20 101.7 79 59.5
Sabra16G0233500 Salix brachista HOM05D000018 ORTHO05D000187 1.8e-19 99.0 67 68.7
Hma1.2p1_0004F.1_g004000 Hydrangea macrophylla HOM05D005687 ORTHO05D007098 8.4e-17 90.1 51 76.5
SEGI_17032 Sequoiadendron giganteum HOM05D005687 ORTHO05D007098 8.4e-17 90.1 52 71.2
Cre03.g149300 Chlamydomonas reinhardtii HOM05D005687 ORTHO05D007098 2.1e-15 85.5 71 59.2
MBI15_g29731_MAGBIO Magnolia biondii HOM05D005687 ORTHO05D007098 7.4e-13 77.0 48 68.8
SMO306G0012 Selaginella moellendorffii HOM05D014392 ORTHO05D011519 9.0e-11 70.1 54 66.7
CBR_g25878 Chara braunii HOM05D005687 ORTHO05D007098 2.9e-09 65.1 40 65.0
SMO159G0002 Selaginella moellendorffii HOM05D013418 ORTHO05D375080 2.5e-08 62.0 32 93.8
Cre11.g467633 Chlamydomonas reinhardtii HOM05D006078 ORTHO05D008109 1.2e-07 59.7 55 43.6
PRCOL_00003686 Prasinoderma coloniale HOM05D006078 ORTHO05D007098 1.6e-07 59.3 55 41.8
CBR_g3668 Chara braunii HOM05D000019 ORTHO05D000048 7.9e-07 57.0 50 48.0


User provided reference genes

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