Gene: HPP92_016134

General Information

Structural Information

  • Species Vanilla planifolia
  • Gene Identifier HPP92_016134
  • Transcript Identifier Vpl08Ag16134.1
  • Gene Type Coding gene
  • Location CM028157.1 : 1038864-1075988 : positive

Gene Family Information

  • ID HOM05D005687
  • #Genes/#Species 136/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Vpl08Ag16134.1
  • pid KAG0469434.1

Descriptions

  • Description tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase ***
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006400
IEA
InterProtRNA modification
GO:0035600
IEA
InterProtRNA methylthiolation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0051536
IEA
InterProiron-sulfur cluster binding
GO:0035596
IEA
InterPromethylthiotransferase activity
GO:0051539
IEA
InterPro4 iron, 4 sulfur cluster binding
GO:0016740
IEA
InterProtransferase activity
GO:0035598
IEA
InterProN6-threonylcarbomyladenosine methylthiotransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT1G72090

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007197 Radical SAM
IPR013848 Methylthiotransferase, N-terminal
IPR023404 Radical SAM, alpha/beta horseshoe
IPR005839 Methylthiotransferase
IPR038135 Methylthiotransferase, N-terminal domain superfamily
IPR006466 MiaB-like tRNA modifying enzyme, archaeal-type
IPR006638 Elp3/MiaB/NifB
Mapman id Description
16.5.6.1 RNA processing.RNA modification.methylthiolation.tRNA methylthiotransferase