Gene: Sopen11g011260

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g011260
  • Transcript Identifier Sopen11g011260.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 14034710-14047265 : positive

Gene Family Information

  • ID HOM05D005687
  • #Genes/#Species 136/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g011260.1

Descriptions

  • Description Methylthiotransferase | FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, iron-sulfur cluster binding, catalytic activity | INVOLVED IN: metabolic process, RNA modification | LOCATED IN: endoplasmic reticulum, membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Methylthiotransferase , Aldolase-type TIM barrel , Methylthiotransferase, conserved site , Methylthiotransferase, N-terminal , Radical SAM , Deoxyribonuclease/rho motif-related TRAM , Elongator protein 3/MiaB/NifB , MiaB-like tRNA modifying enzyme, archaeal-type | BEST Arabidopsis thaliana protein match is: Methylthiotransferase
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035600
IEA
InterProtRNA methylthiolation
GO:0006400
IEA
InterProtRNA modification

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035598
IEA
InterProN6-threonylcarbomyladenosine methylthiotransferase activity
GO:0003824
IEA
InterProcatalytic activity
GO:0051536
IEA
InterProiron-sulfur cluster binding
GO:0016740
IEA
InterProtransferase activity
GO:0051539
IEA
InterPro4 iron, 4 sulfur cluster binding
GO:0035596
IEA
InterPromethylthiotransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT1G72090

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006466 MiaB-like tRNA modifying enzyme, archaeal-type
IPR007197 Radical SAM
IPR006638 Elp3/MiaB/NifB
IPR005839 Methylthiotransferase
IPR023404 Radical SAM, alpha/beta horseshoe
IPR013848 Methylthiotransferase, N-terminal
IPR038135 Methylthiotransferase, N-terminal domain superfamily
Mapman id Description
16.5.6.1 RNA processing.RNA modification.methylthiolation.tRNA methylthiotransferase