Gene: Sed0023668

General Information

Structural Information

  • Species Sechium edule
  • Gene Identifier Sed0023668
  • Transcript Identifier Sed0023668.2
  • Gene Type Coding gene
  • Location LG10 : 37786681-37797218 : positive

Gene Family Information

  • ID HOM05D005687
  • #Genes/#Species 136/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sed0023668.2

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035600
IEA
InterProtRNA methylthiolation
GO:0006400
IEA
InterProtRNA modification

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0051536
IEA
InterProiron-sulfur cluster binding
GO:0035598
IEA
InterProN6-threonylcarbomyladenosine methylthiotransferase activity
GO:0016740
IEA
InterProtransferase activity
GO:0051539
IEA
InterPro4 iron, 4 sulfur cluster binding
GO:0035596
ISO
PLAZA Homology (enrichment)methylthiotransferase activity HOM05D005687

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT1G72090

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007197 Radical SAM
IPR006638 Elp3/MiaB/NifB
IPR006466 MiaB-like tRNA modifying enzyme, archaeal-type
IPR038135 Methylthiotransferase, N-terminal domain superfamily
IPR023404 Radical SAM, alpha/beta horseshoe
IPR005839 Methylthiotransferase
Mapman id Description
16.5.6.1 RNA processing.RNA modification.methylthiolation.tRNA methylthiotransferase